Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p07240 Brassica napus HOM05D004181 ORTHO05D021060 2.0e-144 515.8 264 100.0
A06p07140 Brassica napus HOM05D004181 ORTHO05D021060 7.1e-134 480.7 293 87.0
A06p07190 Brassica napus HOM05D004181 ORTHO05D021060 8.6e-79 297.7 153 97.4
Sp6g25640 Schrenkiella parvula HOM05D004181 ORTHO05D005610 9.5e-78 294.3 381 51.4
BraA03t10229Z Brassica rapa HOM05D004181 ORTHO05D005610 1.2e-75 287.3 381 50.4
BolC3t13535H Brassica oleracea HOM05D004181 ORTHO05D005610 1.5e-75 287.0 381 50.4
A03p09050 Brassica napus HOM05D004181 ORTHO05D005610 2.6e-75 286.2 381 50.1
AL6G29980 Arabidopsis lyrata HOM05D004181 ORTHO05D005610 4.4e-75 285.4 382 50.5
AT5G18700 Arabidopsis thaliana HOM05D004181 ORTHO05D005610 4.4e-75 285.4 382 50.3
Carub.0006s1700 Capsella rubella HOM05D004181 ORTHO05D005610 1.3e-74 283.9 382 50.3
C09p57750 Brassica napus HOM05D004181 ORTHO05D005610 1.7e-74 283.5 379 50.4
BolC9t58645H Brassica oleracea HOM05D004181 ORTHO05D005610 3.7e-74 282.3 379 50.1
BcaC04g18651 Brassica carinata HOM05D004181 ORTHO05D005610 4.9e-74 282.0 379 49.9
BraA10t44151Z Brassica rapa HOM05D004181 ORTHO05D005610 6.4e-74 281.6 379 50.4
Thhalv10012450m.g Eutrema salsugineum HOM05D004181 ORTHO05D005610 6.4e-74 281.6 381 50.4
CARHR194300 Cardamine hirsuta HOM05D004181 ORTHO05D005610 1.4e-73 280.4 382 50.3
A10p20860 Brassica napus HOM05D004181 ORTHO05D005610 3.2e-73 279.3 379 50.1
C03p10540 Brassica napus HOM05D004181 ORTHO05D005610 3.2e-73 279.3 420 47.1
Aa31LG11G10920 Aethionema arabicum HOM05D004181 ORTHO05D005610 3.0e-63 246.1 383 45.4
BcaB08g36651 Brassica carinata HOM05D004181 ORTHO05D005610 2.0e-59 233.4 369 45.3
BraA06t23930Z Brassica rapa HOM05D004181 ORTHO05D021060 1.3e-55 220.7 114 100.0
GSVIVG01017819001 Vitis vinifera HOM05D004181 ORTHO05D005610 6.6e-47 191.8 353 39.1
MD13G1174600 Malus domestica HOM05D004181 ORTHO05D005610 2.1e-45 186.8 338 40.8
QL06p007241 Quercus lobata HOM05D004181 ORTHO05D005610 3.6e-45 186.0 389 37.3
Cpa.g.sc16.105 Carica papaya HOM05D004181 ORTHO05D005610 1.1e-44 184.5 372 38.4
Duzib151G0672 Durio zibethinus HOM05D004181 ORTHO05D005610 1.5e-43 180.6 372 37.4
Aqoxy5G00623 Aquilegia oxysepala HOM05D004181 ORTHO05D005610 4.4e-43 179.1 371 36.4
COL.COLO4_13939 Corchorus olitorius HOM05D004181 ORTHO05D005610 5.8e-43 178.7 372 36.8
Haze_01049 Corylus avellana HOM05D004181 ORTHO05D005610 1.7e-42 177.2 379 37.7
QL12p038326 Quercus lobata HOM05D004181 ORTHO05D005610 1.7e-42 177.2 388 36.1
CiPaw.01G154000 Carya illinoinensis HOM05D004181 ORTHO05D005610 2.2e-42 176.8 373 36.5
Thecc.04G276100 Theobroma cacao HOM05D004181 ORTHO05D005610 2.9e-42 176.4 372 36.0
Dinv44435 Davidia involucrata HOM05D004181 ORTHO05D005610 4.9e-42 175.6 388 36.3
CSS0009092 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 8.4e-42 174.9 388 36.3
TPR.G1487 Trifolium pratense HOM05D004181 ORTHO05D005610 1.9e-41 173.7 372 36.3
Prupe.1G143100 Prunus persica HOM05D004181 ORTHO05D005610 2.4e-41 173.3 389 36.8
Glyma.13G214400 Glycine max HOM05D004181 ORTHO05D005610 4.2e-41 172.6 375 36.0
Manes.15G017750 Manihot esculenta HOM05D004181 ORTHO05D005610 4.2e-41 172.6 374 36.6
Ciclev10004155m.g Citrus clementina HOM05D004181 ORTHO05D005610 5.4e-41 172.2 381 36.7
Cc03_g12380 Coffea canephora HOM05D004181 ORTHO05D005610 5.4e-41 172.2 372 36.0
Phvul.006G160500 Phaseolus vulgaris HOM05D004181 ORTHO05D005610 7.1e-41 171.8 372 35.8
Gorai.005G057000 Gossypium raimondii HOM05D004181 ORTHO05D005610 1.6e-40 170.6 371 36.1
Sed0026329 Sechium edule HOM05D004181 ORTHO05D005610 1.6e-40 170.6 372 36.3
Cfa015503 Carpinus fangiana HOM05D004181 ORTHO05D005610 2.1e-40 170.2 372 37.4
Gohir.D02G051700 Gossypium hirsutum HOM05D004181 ORTHO05D005610 2.1e-40 170.2 371 36.1
RcHm_v2.0_Chr4g0420851 Rosa chinensis HOM05D004181 ORTHO05D005610 2.1e-40 170.2 412 35.2
MD16G1176300 Malus domestica HOM05D004181 ORTHO05D005610 2.7e-40 169.9 372 35.8
Medtr2g020380 Medicago truncatula HOM05D004181 ORTHO05D005610 2.7e-40 169.9 372 35.8
Psat1g186920 Pisum sativum HOM05D004181 ORTHO05D005610 2.7e-40 169.9 367 37.3
Peaxi162Scf00058g01114 Petunia axillaris HOM05D004181 ORTHO05D005610 3.5e-40 169.5 373 35.9
CSS0036329 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 4.6e-40 169.1 388 35.6
Lalb_Chr18g0055771 Lupinus albus HOM05D004181 ORTHO05D005610 4.6e-40 169.1 413 35.4
FAN12G4244 Fragaria x ananassa HOM05D004181 ORTHO05D005610 6.0e-40 168.7 412 34.7
CsaV3_3G014080 Cucumis sativus L. HOM05D004181 ORTHO05D005610 7.8e-40 168.3 372 36.0
CANSAT78G2156 Cannabis sativa HOM05D004181 ORTHO05D005610 1.0e-39 167.9 390 34.9
FAN22G0275 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.0e-39 167.9 371 35.6
Gorai.011G185300 Gossypium raimondii HOM05D004181 ORTHO05D005610 1.0e-39 167.9 372 35.5
FvH4_4g17050 Fragaria vesca HOM05D004181 ORTHO05D005610 1.3e-39 167.5 412 34.5
FAN17G2769 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.3e-39 167.5 412 34.5
AUR62040726 Chenopodium quinoa HOM05D004181 ORTHO05D005610 1.7e-39 167.2 384 35.7
LjContig00389g0007799 Lotus japonicus HOM05D004181 ORTHO05D005610 1.7e-39 167.2 372 36.3
MELO3C006602.2 Cucumis melo HOM05D004181 ORTHO05D005610 3.0e-39 166.4 372 35.8
PSO170G6249 Papaver somniferum HOM05D004181 ORTHO05D005610 3.9e-39 166.0 371 34.5
TWI09G1497 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 3.9e-39 166.0 372 36.6
TWI73G0666 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 3.9e-39 166.0 374 36.4
TAR633G0339 Trochodendron aralioides HOM05D004181 ORTHO05D005610 3.9e-39 166.0 391 34.3
ClCG05G005760 Citrullus lanatus HOM05D004181 ORTHO05D005610 5.1e-39 165.6 372 36.3
VMungo0540G0214 Vigna mungo HOM05D004181 ORTHO05D005610 5.1e-39 165.6 372 35.8
FAN12G1830 Fragaria x ananassa HOM05D004181 ORTHO05D005610 6.6e-39 165.2 412 34.5
Gohir.A10G101825 Gossypium hirsutum HOM05D004181 ORTHO05D005610 6.6e-39 165.2 371 35.0
Sed0020769 Sechium edule HOM05D004181 ORTHO05D005610 6.6e-39 165.2 372 36.3
SalBow5G0241 Salvia bowleyana HOM05D004181 ORTHO05D005610 8.7e-39 164.9 369 34.7
Ca_00581_v3 Cicer arietinum L. HOM05D004181 ORTHO05D005610 1.1e-38 164.5 371 36.1
FAN07G0512 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.1e-38 164.5 389 35.0
Lalb_Chr15g0087081 Lupinus albus HOM05D004181 ORTHO05D005610 1.1e-38 164.5 383 37.1
SalBow5G5345 Salvia bowleyana HOM05D004181 ORTHO05D005610 1.1e-38 164.5 369 34.4
Manes.03G190400 Manihot esculenta HOM05D004181 ORTHO05D005610 3.3e-38 162.9 408 34.1
AUR62040385 Chenopodium quinoa HOM05D004181 ORTHO05D005610 4.3e-38 162.5 384 35.2
Nitab4.5_0000242g0080 Nicotiana tabacum HOM05D004181 ORTHO05D005610 5.6e-38 162.2 372 35.2
Rhsim04G0215600 Rhododendron simsii HOM05D004181 ORTHO05D005610 9.6e-38 161.4 387 34.4
Glyma.15G098800 Glycine max HOM05D004181 ORTHO05D005610 3.6e-37 159.5 414 33.3
Potri.010G031800 Populus trichocarpa HOM05D004181 ORTHO05D005610 3.6e-37 159.5 371 36.1
MSTRG.21818 Avicennia marina HOM05D004181 ORTHO05D005610 4.8e-37 159.1 374 34.0
Solyc08g013940.3 Solanum lycopersicum HOM05D004181 ORTHO05D005610 6.2e-37 158.7 373 35.1
Sopen08g004800 Solanum pennellii HOM05D004181 ORTHO05D005610 6.2e-37 158.7 373 35.1
CAN.G2005.1 Capsicum annuum HOM05D004181 ORTHO05D005610 4.0e-36 156.0 389 33.2
Nitab4.5_0003641g0020 Nicotiana tabacum HOM05D004181 ORTHO05D005610 4.0e-36 156.0 372 34.4
Peaxi162Scf00075g01553 Petunia axillaris HOM05D004181 ORTHO05D005610 4.0e-36 156.0 372 33.9
Eucgr.H03714 Eucalyptus grandis HOM05D004181 ORTHO05D005610 6.9e-36 155.2 365 33.2
CiPaw.02G087200 Carya illinoinensis HOM05D004181 ORTHO05D005610 9.0e-36 154.8 326 35.6
Nn3g21283 Nelumbo nucifera HOM05D004181 ORTHO05D005610 9.0e-36 154.8 372 33.1
Sabra08G0148900 Salix brachista HOM05D004181 ORTHO05D005610 9.0e-36 154.8 372 34.4
Gohir.D10G165800 Gossypium hirsutum HOM05D004181 ORTHO05D005610 1.2e-35 154.5 363 34.7
SGA_v2.0_scaffold89G27558 Striga asiatica HOM05D004181 ORTHO05D005610 1.5e-35 154.1 369 33.3
EL10Ac3g06539 Beta vulgaris HOM05D004181 ORTHO05D005610 3.4e-35 152.9 383 34.5
Potri.008G195800 Populus trichocarpa HOM05D004181 ORTHO05D005610 2.2e-34 150.2 371 34.2
vmacro08213 Vaccinium macrocarpon HOM05D004181 ORTHO05D005610 7.1e-33 145.2 376 33.0
ATR0706G144 Amborella trichopoda HOM05D004181 ORTHO05D005610 2.1e-32 143.7 385 31.9
Migut.N00126 Erythranthe guttata HOM05D004181 ORTHO05D005610 6.0e-32 142.1 207 43.5
arahy.Tifrunner.gnm1.ann1.6ZP27B Arachis hypogaea HOM05D004181 ORTHO05D005610 2.1e-29 133.7 255 39.2
CDE12G0304 Ceratophyllum demersum HOM05D004181 ORTHO05D005610 2.1e-29 133.7 358 31.6
HPP92_025279 Vanilla planifolia HOM05D004181 ORTHO05D005610 3.6e-29 132.9 378 29.1
Hund20614 Selenicereus undatus HOM05D004181 ORTHO05D005610 8.1e-29 131.7 253 39.5
AT1G33940 Arabidopsis thaliana HOM05D004181 ORTHO05D005610 3.1e-28 129.8 74 89.2
Zm00001eb333450 Zea mays HOM05D004181 ORTHO05D005610 9.0e-28 128.3 372 30.6
SHI00295 Sapria himalayana HOM05D004181 ORTHO05D005610 1.5e-27 127.5 382 30.6
Zm00001eb127880 Zea mays HOM05D004181 ORTHO05D005610 2.0e-27 127.1 373 30.6
Os01g0259400 Oryza sativa ssp. japonica HOM05D004181 ORTHO05D005610 7.6e-27 125.2 372 29.6
Lj6C668T4 Lonicera japonica HOM05D004181 ORTHO05D005610 9.3e-25 118.2 122 51.6
A06p07180 Brassica napus HOM05D004181 ORTHO05D021060 1.2e-24 117.9 104 67.3
Atru.chr4.2742 Acer truncatum HOM05D004181 ORTHO05D005610 1.0e-23 114.8 98 60.2
RcHm_v2.0_Chr4g0420821 Rosa chinensis HOM05D004181 ORTHO05D005610 3.9e-23 112.8 146 45.9
SEGI_19119 Sequoiadendron giganteum HOM05D004181 ORTHO05D005610 1.6e-21 107.5 219 36.1
ECA233G4950 Erigeron canadensis HOM05D004181 ORTHO05D005610 6.2e-21 105.5 116 48.3
DCAR_024617 Daucus carota HOM05D004181 ORTHO05D005610 1.4e-20 104.4 123 44.7
Lsat_1_v5_gn_6_15980 Lactuca sativa HOM05D004181 ORTHO05D005610 1.4e-20 104.4 122 46.7
Gohir.A02G045701 Gossypium hirsutum HOM05D004181 ORTHO05D005610 1.2e-19 101.3 311 30.9
HanXRQChr13g0414551 Helianthus annuus HOM05D004181 ORTHO05D005610 7.6e-19 98.6 116 47.4
Pp3c2_16690 Physcomitrium patens HOM05D004181 ORTHO05D005610 1.4e-17 94.4 133 42.9
Pp3c14_3850 Physcomitrium patens HOM05D004181 ORTHO05D005610 4.2e-17 92.8 219 32.0
AagrBONN_evm.TU.Sc2ySwM_117.2942 Anthoceros agrestis HOM05D004181 ORTHO05D005610 1.6e-16 90.9 233 30.0
Mapoly0072s0051 Marchantia polymorpha HOM05D004181 ORTHO05D005610 3.9e-15 86.3 221 29.4
SGA_v2.0_scaffold299G47726 Striga asiatica HOM05D004181 ORTHO05D005610 1.8e-12 77.4 157 35.0
Atru.chr4.2743 Acer truncatum HOM05D004181 ORTHO05D021060 4.1e-12 76.3 65 58.5
Sc13g0003660 Simmondsia chinensis HOM05D004181 ORTHO05D005610 1.5e-11 74.3 83 50.6
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 3.8e-10 69.7 86 45.3
CBR_g38144 Chara braunii HOM05D004181 ORTHO05D005610 1.2e-08 64.7 154 29.2


User provided reference genes

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