Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p07230 Brassica napus HOM05D025684 ORTHO05D033361 4.4e-68 261.2 130 100.0
A06p07170 Brassica napus HOM05D025684 ORTHO05D033361 4.9e-43 177.9 88 100.0
C05p08700 Brassica napus HOM05D000111 ORTHO05D015397 1.1e-29 133.7 69 95.7
C05p08610 Brassica napus HOM05D000111 ORTHO05D015397 1.4e-29 133.3 67 98.5
BcaC05g24881 Brassica carinata HOM05D000111 ORTHO05D015397 1.5e-28 129.8 76 86.8
BolC5t29614H Brassica oleracea HOM05D000111 ORTHO05D015397 5.8e-28 127.9 64 98.4
BolC5t29619H Brassica oleracea HOM05D025684 ORTHO05D033361 1.2e-17 93.6 49 91.8
BcaC05g24930 Brassica carinata HOM05D000111 ORTHO05D000134 1.4e-10 70.1 75 48.0
C05p08760 Brassica napus HOM05D000111 ORTHO05D015397 9.3e-10 67.4 58 62.1
A06p07110 Brassica napus HOM05D025684 ORTHO05D100401 4.6e-09 65.1 66 50.0
PGR004G2320 Punica granatum HOM05D000111 ORTHO05D000134 1.5e-07 60.1 57 52.6
C06p49300 Brassica napus HOM05D000111 ORTHO05D000134 1.9e-07 59.7 66 50.0
DCAR_005522 Daucus carota HOM05D000111 ORTHO05D000134 3.3e-07 58.9 56 50.0
BolC3t16354H Brassica oleracea HOM05D000111 ORTHO05D013399 4.3e-07 58.5 83 33.7
unitig_37.g12283 Utricularia gibba HOM05D000111 ORTHO05D000134 4.3e-07 58.5 57 52.6
BcaC08g47370 Brassica carinata HOM05D000111 ORTHO05D000134 7.3e-07 57.8 66 48.5
C02p45710 Brassica napus HOM05D000111 ORTHO05D021645 7.3e-07 57.8 53 50.9
BolC6t39965H Brassica oleracea HOM05D000111 ORTHO05D000134 7.3e-07 57.8 66 48.5
BolC2t10631H Brassica oleracea HOM05D000111 ORTHO05D021645 9.6e-07 57.4 55 47.3
Thecc.05G265900 Theobroma cacao HOM05D000111 ORTHO05D000134 9.6e-07 57.4 56 46.4
BcaNung04381 Brassica carinata HOM05D000111 ORTHO05D000134 1.6e-06 56.6 56 51.8
Gohir.A11G244400 Gossypium hirsutum HOM05D000111 ORTHO05D000134 1.6e-06 56.6 56 46.4
C03p40830 Brassica napus HOM05D000111 ORTHO05D013399 2.1e-06 56.2 80 33.8
FAN09G1802 Fragaria x ananassa HOM05D000111 ORTHO05D000134 2.8e-06 55.8 35 65.7
Lj1g0027338 Lotus japonicus HOM05D000111 ORTHO05D000134 2.8e-06 55.8 36 66.7
Atru.chr2.1126 Acer truncatum HOM05D000111 ORTHO05D000134 3.6e-06 55.5 51 49.0
Gohir.D11G254400 Gossypium hirsutum HOM05D000111 ORTHO05D000134 3.6e-06 55.5 57 45.6
Gorai.007G273000 Gossypium raimondii HOM05D000111 ORTHO05D000134 3.6e-06 55.5 57 45.6
Psat0s5189g0040 Pisum sativum HOM05D000111 ORTHO05D000134 3.6e-06 55.5 36 63.9
Peaxi162Scf00077g01710 Petunia axillaris HOM05D000111 ORTHO05D000134 4.8e-06 55.1 64 45.3
THA.LOC104827472 Tarenaya hassleriana HOM05D000111 ORTHO05D000134 4.8e-06 55.1 35 65.7
Actinidia06828 Actinidia chinensis HOM05D000111 ORTHO05D000134 6.2e-06 54.7 35 65.7
arahy.Tifrunner.gnm1.ann1.28H6X3 Arachis hypogaea HOM05D000111 ORTHO05D000134 6.2e-06 54.7 35 62.9
CSS0015163 Camellia sinensis var. sinensis HOM05D000111 ORTHO05D000134 6.2e-06 54.7 35 65.7
CSS0023952 Camellia sinensis var. sinensis HOM05D000111 ORTHO05D000134 6.2e-06 54.7 35 65.7
Phvul.006G106900 Phaseolus vulgaris HOM05D000111 ORTHO05D000134 6.2e-06 54.7 36 63.9
THA.LOC104802851 Tarenaya hassleriana HOM05D000111 ORTHO05D000134 6.2e-06 54.7 47 53.2
THA.LOC104817586 Tarenaya hassleriana HOM05D000111 ORTHO05D000134 6.2e-06 54.7 47 51.1
VMungo0540G0773 Vigna mungo HOM05D000111 ORTHO05D000134 6.2e-06 54.7 36 63.9
arahy.Tifrunner.gnm1.ann1.D01JRP Arachis hypogaea HOM05D000111 ORTHO05D000134 8.1e-06 54.3 35 62.9
Medtr7g116420 Medicago truncatula HOM05D000111 ORTHO05D000134 8.1e-06 54.3 35 65.7
Rhsim05G0170300 Rhododendron simsii HOM05D000111 ORTHO05D000134 8.1e-06 54.3 55 47.3


User provided reference genes

Program Settings