Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p07190 Brassica napus HOM05D004181 ORTHO05D021060 7.2e-104 380.6 188 100.0
A06p07140 Brassica napus HOM05D004181 ORTHO05D021060 1.4e-99 366.3 182 100.0
A06p07240 Brassica napus HOM05D004181 ORTHO05D021060 1.2e-79 300.1 153 97.4
CARHR194300 Cardamine hirsuta HOM05D004181 ORTHO05D005610 6.8e-54 214.5 157 75.8
AL6G29980 Arabidopsis lyrata HOM05D004181 ORTHO05D005610 1.2e-53 213.8 157 75.2
Sp6g25640 Schrenkiella parvula HOM05D004181 ORTHO05D005610 1.5e-53 213.4 157 75.2
Carub.0006s1700 Capsella rubella HOM05D004181 ORTHO05D005610 2.0e-53 213.0 157 74.5
AT5G18700 Arabidopsis thaliana HOM05D004181 ORTHO05D005610 3.4e-53 212.2 157 74.5
Thhalv10012450m.g Eutrema salsugineum HOM05D004181 ORTHO05D005610 3.4e-53 212.2 157 75.2
A10p20860 Brassica napus HOM05D004181 ORTHO05D005610 5.7e-53 211.5 157 74.5
BraA10t44151Z Brassica rapa HOM05D004181 ORTHO05D005610 5.7e-53 211.5 157 74.5
BcaC04g18651 Brassica carinata HOM05D004181 ORTHO05D005610 7.5e-53 211.1 157 73.9
C09p57750 Brassica napus HOM05D004181 ORTHO05D005610 7.5e-53 211.1 157 73.9
BolC9t58645H Brassica oleracea HOM05D004181 ORTHO05D005610 7.5e-53 211.1 157 73.9
BolC3t13535H Brassica oleracea HOM05D004181 ORTHO05D005610 1.3e-52 210.3 157 73.2
A03p09050 Brassica napus HOM05D004181 ORTHO05D005610 2.2e-52 209.5 157 72.6
BraA03t10229Z Brassica rapa HOM05D004181 ORTHO05D005610 1.8e-51 206.5 157 72.0
C03p10540 Brassica napus HOM05D004181 ORTHO05D005610 3.2e-51 205.7 196 62.2
Aa31LG11G10920 Aethionema arabicum HOM05D004181 ORTHO05D005610 5.9e-50 201.4 157 70.7
BcaB08g36651 Brassica carinata HOM05D004181 ORTHO05D005610 3.1e-38 162.5 157 59.9
QL06p007241 Quercus lobata HOM05D004181 ORTHO05D005610 5.8e-37 158.3 155 58.7
CSS0009092 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 2.4e-35 152.9 155 58.7
Cpa.g.sc16.105 Carica papaya HOM05D004181 ORTHO05D005610 2.4e-35 152.9 155 58.7
Thecc.04G276100 Theobroma cacao HOM05D004181 ORTHO05D005610 3.2e-35 152.5 155 56.1
CiPaw.01G154000 Carya illinoinensis HOM05D004181 ORTHO05D005610 4.1e-35 152.1 155 55.5
Duzib151G0672 Durio zibethinus HOM05D004181 ORTHO05D005610 4.1e-35 152.1 155 56.1
Gohir.D10G165800 Gossypium hirsutum HOM05D004181 ORTHO05D005610 1.6e-34 150.2 155 54.8
Manes.15G017750 Manihot esculenta HOM05D004181 ORTHO05D005610 1.6e-34 150.2 155 56.1
Cc03_g12380 Coffea canephora HOM05D004181 ORTHO05D005610 2.1e-34 149.8 173 52.6
Manes.03G190400 Manihot esculenta HOM05D004181 ORTHO05D005610 2.1e-34 149.8 188 50.0
Dinv44435 Davidia involucrata HOM05D004181 ORTHO05D005610 2.7e-34 149.4 155 56.1
Gorai.011G185300 Gossypium raimondii HOM05D004181 ORTHO05D005610 2.7e-34 149.4 155 54.8
Peaxi162Scf00058g01114 Petunia axillaris HOM05D004181 ORTHO05D005610 2.7e-34 149.4 157 54.8
COL.COLO4_13939 Corchorus olitorius HOM05D004181 ORTHO05D005610 3.5e-34 149.1 155 55.5
Gohir.D02G051700 Gossypium hirsutum HOM05D004181 ORTHO05D005610 3.5e-34 149.1 155 54.8
Gorai.005G057000 Gossypium raimondii HOM05D004181 ORTHO05D005610 3.5e-34 149.1 155 54.8
TAR633G0339 Trochodendron aralioides HOM05D004181 ORTHO05D005610 4.6e-34 148.7 155 54.2
CSS0036329 Camellia sinensis var. sinensis HOM05D004181 ORTHO05D005610 6.0e-34 148.3 155 56.1
MD13G1174600 Malus domestica HOM05D004181 ORTHO05D005610 6.0e-34 148.3 155 54.8
TWI73G0666 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 6.0e-34 148.3 155 56.1
QL12p038326 Quercus lobata HOM05D004181 ORTHO05D005610 7.8e-34 147.9 155 54.8
Aqoxy5G00623 Aquilegia oxysepala HOM05D004181 ORTHO05D005610 1.0e-33 147.5 157 52.9
Rhsim04G0215600 Rhododendron simsii HOM05D004181 ORTHO05D005610 1.0e-33 147.5 153 56.2
Prupe.1G143100 Prunus persica HOM05D004181 ORTHO05D005610 1.7e-33 146.7 155 55.5
MD16G1176300 Malus domestica HOM05D004181 ORTHO05D005610 2.3e-33 146.4 155 53.5
PSO170G6249 Papaver somniferum HOM05D004181 ORTHO05D005610 2.3e-33 146.4 155 54.2
TPR.G1487 Trifolium pratense HOM05D004181 ORTHO05D005610 3.0e-33 146.0 155 54.2
CsaV3_3G014080 Cucumis sativus L. HOM05D004181 ORTHO05D005610 3.9e-33 145.6 155 54.2
LjContig00389g0007799 Lotus japonicus HOM05D004181 ORTHO05D005610 3.9e-33 145.6 155 54.8
Phvul.006G160500 Phaseolus vulgaris HOM05D004181 ORTHO05D005610 3.9e-33 145.6 155 55.5
AUR62040726 Chenopodium quinoa HOM05D004181 ORTHO05D005610 5.1e-33 145.2 155 56.8
Gohir.A10G101825 Gossypium hirsutum HOM05D004181 ORTHO05D005610 5.1e-33 145.2 155 54.2
Medtr2g020380 Medicago truncatula HOM05D004181 ORTHO05D005610 5.1e-33 145.2 155 53.5
Psat1g186920 Pisum sativum HOM05D004181 ORTHO05D005610 5.1e-33 145.2 155 53.5
Sed0026329 Sechium edule HOM05D004181 ORTHO05D005610 5.1e-33 145.2 155 53.5
VMungo0540G0214 Vigna mungo HOM05D004181 ORTHO05D005610 5.1e-33 145.2 154 55.8
TWI09G1497 Tripterygium wilfordii HOM05D004181 ORTHO05D005610 6.6e-33 144.8 155 55.5
AUR62040385 Chenopodium quinoa HOM05D004181 ORTHO05D005610 8.6e-33 144.4 155 56.8
Lalb_Chr18g0055771 Lupinus albus HOM05D004181 ORTHO05D005610 8.6e-33 144.4 155 55.5
ClCG05G005760 Citrullus lanatus HOM05D004181 ORTHO05D005610 1.1e-32 144.1 155 53.5
Haze_01049 Corylus avellana HOM05D004181 ORTHO05D005610 1.1e-32 144.1 154 55.2
MELO3C006602.2 Cucumis melo HOM05D004181 ORTHO05D005610 1.1e-32 144.1 155 53.5
Glyma.13G214400 Glycine max HOM05D004181 ORTHO05D005610 1.1e-32 144.1 157 53.5
SalBow5G0241 Salvia bowleyana HOM05D004181 ORTHO05D005610 1.1e-32 144.1 155 53.5
SalBow5G5345 Salvia bowleyana HOM05D004181 ORTHO05D005610 1.5e-32 143.7 155 52.9
Migut.N00126 Erythranthe guttata HOM05D004181 ORTHO05D005610 1.9e-32 143.3 158 51.9
Sabra08G0148900 Salix brachista HOM05D004181 ORTHO05D005610 1.9e-32 143.3 155 54.8
EL10Ac3g06539 Beta vulgaris HOM05D004181 ORTHO05D005610 2.5e-32 142.9 154 54.5
RcHm_v2.0_Chr4g0420851 Rosa chinensis HOM05D004181 ORTHO05D005610 2.5e-32 142.9 155 52.9
Sed0020769 Sechium edule HOM05D004181 ORTHO05D005610 2.5e-32 142.9 155 53.5
FAN12G4244 Fragaria x ananassa HOM05D004181 ORTHO05D005610 4.3e-32 142.1 155 51.6
FAN22G0275 Fragaria x ananassa HOM05D004181 ORTHO05D005610 4.3e-32 142.1 155 51.6
Eucgr.H03714 Eucalyptus grandis HOM05D004181 ORTHO05D005610 5.6e-32 141.7 153 51.0
Ciclev10004155m.g Citrus clementina HOM05D004181 ORTHO05D005610 7.3e-32 141.4 163 53.4
Hund20614 Selenicereus undatus HOM05D004181 ORTHO05D005610 7.3e-32 141.4 166 53.6
SGA_v2.0_scaffold89G27558 Striga asiatica HOM05D004181 ORTHO05D005610 7.3e-32 141.4 155 54.2
Cfa015503 Carpinus fangiana HOM05D004181 ORTHO05D005610 9.5e-32 141.0 168 51.2
Ca_00581_v3 Cicer arietinum L. HOM05D004181 ORTHO05D005610 9.5e-32 141.0 154 53.2
FvH4_4g17050 Fragaria vesca HOM05D004181 ORTHO05D005610 9.5e-32 141.0 155 51.0
Glyma.15G098800 Glycine max HOM05D004181 ORTHO05D005610 9.5e-32 141.0 196 46.4
GSVIVG01017819001 Vitis vinifera HOM05D004181 ORTHO05D005610 9.5e-32 141.0 123 61.0
arahy.Tifrunner.gnm1.ann1.6ZP27B Arachis hypogaea HOM05D004181 ORTHO05D005610 1.2e-31 140.6 196 45.9
FAN12G1830 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.2e-31 140.6 155 51.6
FAN17G2769 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.2e-31 140.6 196 44.9
FAN07G0512 Fragaria x ananassa HOM05D004181 ORTHO05D005610 1.6e-31 140.2 154 51.3
Potri.008G195800 Populus trichocarpa HOM05D004181 ORTHO05D005610 2.1e-31 139.8 154 53.9
Solyc08g013940.3 Solanum lycopersicum HOM05D004181 ORTHO05D005610 3.6e-31 139.0 155 54.2
Sopen08g004800 Solanum pennellii HOM05D004181 ORTHO05D005610 4.7e-31 138.7 155 54.2
CANSAT78G2156 Cannabis sativa HOM05D004181 ORTHO05D005610 6.2e-31 138.3 155 51.6
CAN.G2005.1 Capsicum annuum HOM05D004181 ORTHO05D005610 8.1e-31 137.9 155 52.3
Nitab4.5_0000242g0080 Nicotiana tabacum HOM05D004181 ORTHO05D005610 8.1e-31 137.9 154 52.6
Peaxi162Scf00075g01553 Petunia axillaris HOM05D004181 ORTHO05D005610 8.1e-31 137.9 166 51.2
Potri.010G031800 Populus trichocarpa HOM05D004181 ORTHO05D005610 1.4e-30 137.1 155 53.5
Nitab4.5_0003641g0020 Nicotiana tabacum HOM05D004181 ORTHO05D005610 6.8e-30 134.8 154 51.3
Lalb_Chr15g0087081 Lupinus albus HOM05D004181 ORTHO05D005610 1.2e-29 134.0 198 47.5
Nn3g21283 Nelumbo nucifera HOM05D004181 ORTHO05D005610 1.2e-29 134.0 155 51.6
MSTRG.21818 Avicennia marina HOM05D004181 ORTHO05D005610 1.5e-29 133.7 155 51.0
vmacro08213 Vaccinium macrocarpon HOM05D004181 ORTHO05D005610 1.5e-29 133.7 152 52.6
CDE12G0304 Ceratophyllum demersum HOM05D004181 ORTHO05D005610 1.4e-27 127.1 158 44.9
Zm00001eb333450 Zea mays HOM05D004181 ORTHO05D005610 3.2e-27 125.9 154 47.4
SHI00295 Sapria himalayana HOM05D004181 ORTHO05D005610 2.1e-26 123.2 155 45.8
ATR0706G144 Amborella trichopoda HOM05D004181 ORTHO05D005610 6.0e-26 121.7 158 46.2
RcHm_v2.0_Chr4g0420821 Rosa chinensis HOM05D004181 ORTHO05D005610 6.0e-26 121.7 177 42.9
Lj6C668T4 Lonicera japonica HOM05D004181 ORTHO05D005610 1.0e-25 120.9 116 53.4
Zm00001eb127880 Zea mays HOM05D004181 ORTHO05D005610 1.7e-25 120.2 154 47.4
HPP92_025279 Vanilla planifolia HOM05D004181 ORTHO05D005610 5.1e-25 118.6 161 43.5
CiPaw.02G087200 Carya illinoinensis HOM05D004181 ORTHO05D005610 8.6e-25 117.9 141 48.9
Os01g0259400 Oryza sativa ssp. japonica HOM05D004181 ORTHO05D005610 1.1e-24 117.5 154 45.5
SEGI_19119 Sequoiadendron giganteum HOM05D004181 ORTHO05D005610 3.3e-24 115.9 159 43.4
Atru.chr4.2742 Acer truncatum HOM05D004181 ORTHO05D005610 5.6e-24 115.2 98 60.2
Pp3c2_16690 Physcomitrium patens HOM05D004181 ORTHO05D005610 1.8e-22 110.2 169 40.8
ECA233G4950 Erigeron canadensis HOM05D004181 ORTHO05D005610 2.4e-22 109.8 121 47.9
Lsat_1_v5_gn_6_15980 Lactuca sativa HOM05D004181 ORTHO05D005610 2.4e-22 109.8 126 48.4
DCAR_024617 Daucus carota HOM05D004181 ORTHO05D005610 1.2e-21 107.5 130 45.4
Pp3c14_3850 Physcomitrium patens HOM05D004181 ORTHO05D005610 1.2e-21 107.5 170 38.2
HanXRQChr13g0414551 Helianthus annuus HOM05D004181 ORTHO05D005610 4.9e-20 102.1 121 46.3
AagrBONN_evm.TU.Sc2ySwM_117.2942 Anthoceros agrestis HOM05D004181 ORTHO05D005610 7.1e-19 98.2 167 35.3
Mapoly0072s0051 Marchantia polymorpha HOM05D004181 ORTHO05D005610 7.1e-19 98.2 174 34.5
Gohir.A02G045701 Gossypium hirsutum HOM05D004181 ORTHO05D005610 3.4e-13 79.3 95 51.6
SGA_v2.0_scaffold299G47726 Striga asiatica HOM05D004181 ORTHO05D005610 1.3e-12 77.4 157 35.0
CBR_g38144 Chara braunii HOM05D004181 ORTHO05D005610 1.2e-10 70.9 172 27.9
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 2.7e-10 69.7 86 45.3
Cre14.g612000 Chlamydomonas reinhardtii HOM05D004181 ORTHO05D005610 3.1e-06 56.2 166 28.3


User provided reference genes

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