Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p06120 Brassica napus HOM05D009911 ORTHO05D009712 5.4e-87 324.3 167 100.0
BraA06t23825Z Brassica rapa HOM05D009911 ORTHO05D009712 2.1e-86 322.4 167 99.4
BolC5t29496H Brassica oleracea HOM05D009911 ORTHO05D009712 2.0e-81 305.8 169 94.1
C05p07390 Brassica napus HOM05D009911 ORTHO05D009712 9.9e-81 303.5 169 93.5
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 1.5e-57 226.5 164 73.8
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 1.7e-56 223.0 167 71.9
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 2.2e-56 222.6 168 72.6
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 2.2e-56 222.6 168 72.6
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 4.9e-56 221.5 167 71.3
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 6.2e-51 204.5 175 66.3
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 9.0e-50 200.7 175 65.1
C05p07380 Brassica napus HOM05D009911 ORTHO05D009712 2.9e-48 195.7 175 64.0
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 1.1e-47 193.7 171 63.7
Thhalv10009653m.g Eutrema salsugineum HOM05D009911 ORTHO05D009712 7.4e-44 181.0 175 58.9
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 2.5e-39 166.0 172 54.7
AL1G19880 Arabidopsis lyrata HOM05D009911 ORTHO05D009712 7.2e-39 164.5 175 53.7
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 5.1e-37 158.3 175 51.4
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 3.4e-33 145.6 175 48.0
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 5.5e-31 138.3 173 44.5
C08p49490 Brassica napus HOM05D009911 ORTHO05D009712 5.1e-29 131.7 174 50.6
BcaC07g41882 Brassica carinata HOM05D009911 ORTHO05D009712 9.1e-26 120.9 174 48.9
BcaC07g41884 Brassica carinata HOM05D009911 ORTHO05D009712 6.7e-21 104.8 108 58.3
BolC5t29495H Brassica oleracea HOM05D009911 ORTHO05D009712 8.5e-16 87.8 88 59.1
A09p65510 Brassica napus HOM05D009911 ORTHO05D009712 2.6e-12 76.3 111 44.1
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 1.8e-10 70.1 168 30.4
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 4.5e-09 65.5 162 27.2
BraA09t41896Z Brassica rapa HOM05D009911 ORTHO05D009712 2.2e-08 63.2 68 51.5
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.1e-07 60.8 160 28.1
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.9e-07 60.1 160 27.5
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 4.2e-07 58.9 173 26.0
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 5.5e-07 58.5 170 28.8
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 1.2e-06 57.4 160 23.8
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 2.1e-06 56.6 168 25.6
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 4.7e-06 55.5 173 22.5
BcaB01g00725 Brassica carinata HOM05D009945 ORTHO05D012028 8.0e-06 54.7 157 27.4


User provided reference genes

Program Settings