Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p06090 Brassica napus HOM05D033003 ORTHO05D032929 1.7e-61 239.2 123 100.0
BraA06t23820Z Brassica rapa HOM05D000028 ORTHO05D004287 1.8e-34 149.4 77 97.4
C05p07410 Brassica napus HOM05D000028 ORTHO05D004287 2.9e-21 105.5 77 72.7
BcaC05g24791 Brassica carinata HOM05D033003 ORTHO05D032929 3.8e-21 105.1 56 96.4
BolC5t29497H Brassica oleracea HOM05D000028 ORTHO05D004287 9.3e-20 100.5 78 71.8
BolC5t29494H Brassica oleracea HOM05D033003 ORTHO05D032929 8.8e-18 94.0 77 70.1
Sp1g07990 Schrenkiella parvula HOM05D000028 ORTHO05D004287 1.1e-17 93.6 72 66.7
A06p06130 Brassica napus HOM05D000028 ORTHO05D004287 5.7e-17 91.3 77 66.2
Thhalv10007900m.g Eutrema salsugineum HOM05D000028 ORTHO05D004287 1.3e-16 90.1 77 62.3
CARHR009340 Cardamine hirsuta HOM05D000028 ORTHO05D004287 8.2e-16 87.4 78 61.5
C08p49480 Brassica napus HOM05D000028 ORTHO05D004287 1.2e-14 83.6 53 79.2
BcaC07g41881 Brassica carinata HOM05D000028 ORTHO05D004287 3.4e-14 82.0 53 77.4
BolC8t52485H Brassica oleracea HOM05D000028 ORTHO05D004287 1.3e-13 80.1 53 75.5
AT1G09380 Arabidopsis thaliana HOM05D000028 ORTHO05D004287 5.0e-13 78.2 78 60.3
A09p65500 Brassica napus HOM05D000028 ORTHO05D004287 1.4e-12 76.6 53 73.6
BraA09t41895Z Brassica rapa HOM05D000028 ORTHO05D004287 1.4e-12 76.6 53 73.6
Carub.0001s0872 Capsella rubella HOM05D000028 ORTHO05D004287 1.0e-10 70.5 63 58.7
Aa31LG1G5700 Aethionema arabicum HOM05D000028 ORTHO05D004287 2.8e-08 62.4 77 45.5
AL1G19890 Arabidopsis lyrata HOM05D000028 ORTHO05D004287 1.2e-06 57.0 77 48.1


User provided reference genes

Program Settings