Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p05600 Brassica napus HOM05D005617 ORTHO05D006847 1.2e-158 563.1 291 100.0
BraA06t23768Z Brassica rapa HOM05D005617 ORTHO05D006847 2.1e-150 535.8 282 98.2
BolC5t29432H Brassica oleracea HOM05D005617 ORTHO05D006847 5.8e-145 517.7 271 97.0
BcaC05g24795 Brassica carinata HOM05D005617 ORTHO05D006847 2.2e-144 515.8 270 97.0
C05p06720 Brassica napus HOM05D005617 ORTHO05D006847 1.3e-141 506.5 271 94.8
Sp1g07300 Schrenkiella parvula HOM05D005617 ORTHO05D006847 4.3e-132 474.9 266 91.0
BcaB07g34105 Brassica carinata HOM05D005617 ORTHO05D006847 2.4e-130 469.2 269 91.8
BcaB03g13320 Brassica carinata HOM05D005617 ORTHO05D006847 4.0e-130 468.4 266 90.6
Thhalv10008167m.g Eutrema salsugineum HOM05D005617 ORTHO05D006847 3.4e-129 465.3 271 88.6
CARHR008550 Cardamine hirsuta HOM05D005617 ORTHO05D006847 2.5e-124 449.1 278 84.2
Carub.0001s0800 Capsella rubella HOM05D005617 ORTHO05D006847 1.4e-122 443.4 278 83.1
Aa31sc110G20 Aethionema arabicum HOM05D005617 ORTHO05D006847 1.7e-120 436.4 270 81.9
AL1G19070 Arabidopsis lyrata HOM05D005617 ORTHO05D006847 6.5e-120 434.5 278 82.7
AT1G08640 Arabidopsis thaliana HOM05D005617 ORTHO05D006847 2.5e-119 432.6 278 82.7
THA.LOC104805778 Tarenaya hassleriana HOM05D005617 ORTHO05D006847 1.9e-111 406.4 268 77.6
Thecc.05G271700 Theobroma cacao HOM05D005617 ORTHO05D006847 5.2e-93 345.1 273 63.4
Duzib177G1169 Durio zibethinus HOM05D005617 ORTHO05D006847 1.1e-92 344.0 274 65.0
Potri.019G018300 Populus trichocarpa HOM05D005617 ORTHO05D006847 1.5e-92 343.6 270 64.1
Gorai.007G345400 Gossypium raimondii HOM05D005617 ORTHO05D006847 2.2e-91 339.7 274 64.6
MD09G1286500 Malus domestica HOM05D005617 ORTHO05D006847 2.8e-91 339.3 277 65.0
Gohir.D11G314200 Gossypium hirsutum HOM05D005617 ORTHO05D006847 3.7e-91 339.0 274 64.6
Gohir.A11G299400 Gossypium hirsutum HOM05D005617 ORTHO05D006847 4.8e-91 338.6 273 63.7
Prupe.6G349300 Prunus persica HOM05D005617 ORTHO05D006847 6.3e-91 338.2 275 65.1
MD17G1278900 Malus domestica HOM05D005617 ORTHO05D006847 2.4e-90 336.3 283 64.0
PGR142G1895 Punica granatum HOM05D005617 ORTHO05D006847 1.2e-89 334.0 266 63.2
FAN14G0582 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.6e-89 332.8 276 64.5
Potri.013G046200 Populus trichocarpa HOM05D005617 ORTHO05D006847 3.5e-89 332.4 277 63.9
FAN14G1026 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.9e-89 331.6 269 66.2
COL.COLO4_15469 Corchorus olitorius HOM05D005617 ORTHO05D006847 1.7e-88 330.1 228 70.2
TWI56G1032 Tripterygium wilfordii HOM05D005617 ORTHO05D006847 1.7e-88 330.1 269 64.7
GSVIVG01023530001 Vitis vinifera HOM05D005617 ORTHO05D006847 3.8e-88 328.9 266 63.2
CANSAT54G2044 Cannabis sativa HOM05D005617 ORTHO05D006847 5.0e-88 328.6 269 64.3
FAN05G0714 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.0e-88 328.6 276 64.1
FAN05G5604 Fragaria x ananassa HOM05D001473 ORTHO05D003934 1.1e-87 327.4 276 64.1
Dinv07760 Davidia involucrata HOM05D005617 ORTHO05D006847 1.9e-87 326.6 269 63.6
arahy.Tifrunner.gnm1.ann1.9NRB0Q Arachis hypogaea HOM05D005617 ORTHO05D006847 2.5e-87 326.2 275 62.5
Manes.08G138800 Manihot esculenta HOM05D005617 ORTHO05D006847 2.5e-87 326.2 267 63.7
arahy.Tifrunner.gnm1.ann1.X65E39 Arachis hypogaea HOM05D005617 ORTHO05D006847 9.4e-87 324.3 275 62.2
CSS0012605 Camellia sinensis var. sinensis HOM05D005617 ORTHO05D006847 9.4e-87 324.3 266 63.2
Eucgr.L02949 Eucalyptus grandis HOM05D005617 ORTHO05D006847 2.7e-86 322.8 279 61.6
Glyma.19G248200 Glycine max HOM05D005617 ORTHO05D006847 3.6e-86 322.4 272 60.3
RcHm_v2.0_Chr3g0449811 Rosa chinensis HOM05D005617 ORTHO05D006847 1.0e-85 320.9 276 62.3
Eucgr.B02145 Eucalyptus grandis HOM05D005617 ORTHO05D006847 1.4e-85 320.5 269 63.2
QL03p030835 Quercus lobata HOM05D005617 ORTHO05D006847 1.4e-85 320.5 270 62.6
TAR636G3199 Trochodendron aralioides HOM05D005617 ORTHO05D006847 1.8e-85 320.1 266 63.5
Glyma.03G250700 Glycine max HOM05D005617 ORTHO05D006847 6.7e-85 318.2 273 60.1
Lj1g0025948 Lotus japonicus HOM05D005617 ORTHO05D006847 8.8e-85 317.8 272 60.7
Ciclev10021517m.g Citrus clementina HOM05D005617 ORTHO05D006847 1.2e-84 317.4 267 62.2
Sed0027621 Sechium edule HOM05D005617 ORTHO05D006847 2.0e-84 316.6 267 60.7
VMungo0540G0455 Vigna mungo HOM05D005617 ORTHO05D006847 7.5e-84 314.7 272 59.6
TPR.G6961 Trifolium pratense HOM05D005617 ORTHO05D006847 9.7e-84 314.3 272 59.9
Phvul.006G105300 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.7e-83 313.5 272 59.9
HanXRQChr14g0455191 Helianthus annuus HOM05D005617 ORTHO05D006847 2.2e-83 313.2 266 63.9
Hma1.2p1_0075F.1_g039170 Hydrangea macrophylla HOM05D005617 ORTHO05D006847 2.8e-83 312.8 272 60.3
CiPaw.08G118100 Carya illinoinensis HOM05D005617 ORTHO05D006847 4.8e-83 312.0 244 63.9
Medtr7g115670 Medicago truncatula HOM05D005617 ORTHO05D006847 4.8e-83 312.0 274 59.9
Cfa006341 Carpinus fangiana HOM05D005617 ORTHO05D006548 6.3e-83 311.6 255 62.7
CsaV3_1G036020 Cucumis sativus L. HOM05D005617 ORTHO05D006847 8.3e-83 311.2 267 59.6
Lalb_Chr04g0262061 Lupinus albus HOM05D005617 ORTHO05D006847 1.8e-82 310.1 287 59.6
Sc06g0003230 Simmondsia chinensis HOM05D005617 ORTHO05D006847 2.4e-82 309.7 268 61.6
Ah.06g191860 Amaranthus hybridus HOM05D005617 ORTHO05D006847 3.1e-82 309.3 219 68.0
EL10Ac4g09040 Beta vulgaris HOM05D005617 ORTHO05D006847 3.1e-82 309.3 239 65.7
Aqoxy2G03651 Aquilegia oxysepala HOM05D005617 ORTHO05D006847 2.7e-81 306.2 267 58.4
ECA238G4125 Erigeron canadensis HOM05D005617 ORTHO05D006847 2.7e-81 306.2 271 59.4
AUR62004851 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.3e-80 303.9 272 60.3
PSO017G5929 Papaver somniferum HOM05D005617 ORTHO05D006847 1.3e-80 303.9 277 58.5
Lj2A41G63 Lonicera japonica HOM05D005617 ORTHO05D006847 3.8e-80 302.4 217 69.6
MBI10_g30078_MAGBIO Magnolia biondii HOM05D005617 ORTHO05D006847 8.5e-80 301.2 266 60.2
Nitab4.5_0003768g0040 Nicotiana tabacum HOM05D005617 ORTHO05D006847 1.1e-79 300.8 267 59.6
Actinidia34747 Actinidia chinensis HOM05D005617 ORTHO05D006847 1.5e-79 300.4 267 58.1
Cc02_g08910 Coffea canephora HOM05D005617 ORTHO05D006847 1.9e-79 300.1 236 66.1
FvH4_6g01960 Fragaria vesca HOM05D005617 ORTHO05D006847 1.9e-79 300.1 246 65.9
Psat3g006600 Pisum sativum HOM05D005617 ORTHO05D006847 2.5e-79 299.7 270 58.9
SalBow3G1639 Salvia bowleyana HOM05D005617 ORTHO05D006847 7.2e-79 298.1 239 62.3
MSTRG.27377 Avicennia marina HOM05D005617 ORTHO05D006847 9.4e-79 297.7 278 55.0
PSO063G2686 Papaver somniferum HOM05D005617 ORTHO05D006847 1.6e-78 297.0 278 57.9
Migut.F00803 Erythranthe guttata HOM05D005617 ORTHO05D006847 4.7e-78 295.4 261 60.2
FAN09G1753 Fragaria x ananassa HOM05D001473 ORTHO05D003934 4.7e-78 295.4 247 64.4
Nitab4.5_0003780g0030 Nicotiana tabacum HOM05D005617 ORTHO05D006847 4.7e-78 295.4 231 66.2
PGSC0003DMG400011501 Solanum tuberosum HOM05D005617 ORTHO05D006847 8.0e-78 294.7 203 70.4
Solyc04g009940.4 Solanum lycopersicum HOM05D005617 ORTHO05D006847 1.8e-77 293.5 201 70.6
ATR0736G212 Amborella trichopoda HOM05D005617 ORTHO05D006847 2.3e-77 293.1 270 56.7
Sopen04g005070 Solanum pennellii HOM05D005617 ORTHO05D006847 2.3e-77 293.1 201 70.6
HPP92_002964 Vanilla planifolia HOM05D005617 ORTHO05D006847 8.8e-77 291.2 237 60.3
CAN.G1609.4 Capsicum annuum HOM05D005617 ORTHO05D006847 2.6e-76 289.7 277 55.6
Oeu012233.2 Olea europaea HOM05D005617 ORTHO05D006847 3.4e-76 289.3 272 55.5
DCAR_023096 Daucus carota HOM05D005617 ORTHO05D006847 5.7e-76 288.5 249 62.7
Lsat_1_v5_gn_2_108021 Lactuca sativa HOM05D005617 ORTHO05D006847 3.7e-75 285.8 266 57.5
Rhsim09G0137600 Rhododendron simsii HOM05D005617 ORTHO05D006847 1.1e-74 284.3 267 56.9
Peaxi162Scf00135g00418 Petunia axillaris HOM05D005617 ORTHO05D006847 5.4e-74 282.0 273 56.0
Haze_04439 Corylus avellana HOM05D005617 ORTHO05D006847 1.3e-72 277.3 284 53.9
SEGI_39921 Sequoiadendron giganteum HOM05D005617 ORTHO05D006847 9.5e-71 271.2 262 53.1
Sabra13G0042400 Salix brachista HOM05D005617 ORTHO05D006847 5.2e-69 265.4 300 52.3
unitig_32.g10679 Utricularia gibba HOM05D005617 ORTHO05D006847 1.2e-68 264.2 234 56.4
Hund22155 Selenicereus undatus HOM05D005617 ORTHO05D006847 1.4e-66 257.3 250 55.6
C08p12050 Brassica napus HOM05D005617 ORTHO05D006847 4.1e-66 255.8 219 67.6
MELO3C020566.2 Cucumis melo HOM05D005617 ORTHO05D006847 7.0e-66 255.0 269 52.0
Nn1g08261 Nelumbo nucifera HOM05D005617 ORTHO05D006847 5.9e-65 251.9 273 50.5
ClCG03G000920 Citrullus lanatus HOM05D005617 ORTHO05D006847 7.8e-65 251.5 246 55.3
CDE04G1987 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.7e-64 250.4 275 53.5
Ca_09461_v3 Cicer arietinum L. HOM05D005617 ORTHO05D006847 1.6e-62 243.8 173 67.6
AUR62040935 Chenopodium quinoa HOM05D005617 ORTHO05D006847 1.3e-59 234.2 163 68.7
SMO116G0251 Selaginella moellendorffii HOM05D005617 ORTHO05D006847 2.2e-59 233.4 207 55.6
Os10g0478100 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 2.4e-58 229.9 207 51.7
Os08g0127600 Oryza sativa ssp. japonica HOM05D005617 ORTHO05D006847 7.0e-58 228.4 212 52.8
Zm00001eb261540 Zea mays HOM05D005617 ORTHO05D006847 7.0e-58 228.4 221 48.4
Mapoly0036s0041 Marchantia polymorpha HOM05D005617 ORTHO05D006847 1.6e-57 227.3 231 52.4
Atru.chr2.967 Acer truncatum HOM05D005617 ORTHO05D006847 1.9e-55 220.3 154 69.5
AagrBONN_evm.TU.Sc2ySwM_344.3205 Anthoceros agrestis HOM05D005617 ORTHO05D006847 2.1e-54 216.9 277 44.4
Cpa.g.sc162.39 Carica papaya HOM05D005617 ORTHO05D006847 6.2e-54 215.3 168 66.1
FAN02G1215 Fragaria x ananassa HOM05D001473 ORTHO05D003934 5.2e-53 212.2 272 47.8
SGA_v2.0_scaffold380G50362 Striga asiatica HOM05D005617 ORTHO05D006847 2.0e-52 210.3 300 43.0
Zm00001eb173360 Zea mays HOM05D005617 ORTHO05D006847 3.2e-50 203.0 186 51.1
vmacro10358 Vaccinium macrocarpon HOM05D005617 ORTHO05D006847 6.6e-48 195.3 243 44.9
Pp3c23_15250 Physcomitrium patens HOM05D005617 ORTHO05D006847 2.8e-46 189.9 288 39.9
BcaC07g38407 Brassica carinata HOM05D005617 ORTHO05D006847 1.9e-39 167.2 138 65.2
CDE04G2248 Ceratophyllum demersum HOM05D005617 ORTHO05D006847 1.9e-39 167.2 112 70.5
CBR_g63068 Chara braunii HOM05D005617 ORTHO05D006847 2.9e-35 153.3 177 43.5
TAR365G0454 Trochodendron aralioides HOM05D005617 ORTHO05D006847 4.2e-34 149.4 212 43.4
C08p11620 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-32 143.7 79 86.1
C08p11690 Brassica napus HOM05D005617 ORTHO05D006847 2.3e-32 143.7 79 84.8
Sabra19G0030400 Salix brachista HOM05D001473 ORTHO05D003934 6.6e-32 142.1 130 59.2
C08p11650 Brassica napus HOM05D005617 ORTHO05D006847 1.9e-31 140.6 79 84.8
TPR.G11236 Trifolium pratense HOM05D005617 ORTHO05D006847 3.3e-31 139.8 112 62.5
BolC8t48841H Brassica oleracea HOM05D005617 ORTHO05D006847 4.0e-29 132.9 80 82.5
SHI23140 Sapria himalayana HOM05D005617 ORTHO05D001257 1.2e-25 121.3 188 36.7
BcaC07g38438 Brassica carinata HOM05D005617 ORTHO05D006847 3.9e-24 116.3 80 77.5
Cpa.g.c45301 Carica papaya HOM05D005617 ORTHO05D006847 1.4e-21 107.8 74 66.2
BcaB01g02218 Brassica carinata HOM05D005617 ORTHO05D006847 1.6e-17 94.4 52 90.4
PRCOL_00003784 Prasinoderma coloniale HOM05D005182 ORTHO05D006847 3.5e-17 93.2 146 32.2
FvH4_6g01860 Fragaria vesca HOM05D005617 ORTHO05D006847 1.6e-14 84.3 105 50.5
FAN14G4186 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.1e-14 84.0 105 49.5
FAN14G5978 Fragaria x ananassa HOM05D005617 ORTHO05D006847 2.1e-14 84.0 105 49.5
FAN09G3889 Fragaria x ananassa HOM05D005617 ORTHO05D006847 8.1e-14 82.0 105 48.6
FAN14G3066 Fragaria x ananassa HOM05D005617 ORTHO05D006847 1.1e-13 81.6 105 48.6
PRCOL_00005829 Prasinoderma coloniale HOM05D005617 ORTHO05D006847 1.8e-13 80.9 170 29.4
Rhsim04G0044500 Rhododendron simsii HOM05D005617 ORTHO05D000521 2.2e-11 73.9 65 56.9
TPR.G6979 Trifolium pratense HOM05D005617 ORTHO05D006847 8.4e-11 72.0 109 43.1
Atru.chr2.966 Acer truncatum HOM05D005617 ORTHO05D006847 2.1e-09 67.4 54 63.0
TPR.G21937 Trifolium pratense HOM05D005617 ORTHO05D006847 2.3e-08 63.9 60 56.7
Cre03.g171100 Chlamydomonas reinhardtii HOM05D005617 ORTHO05D006847 8.7e-08 62.0 234 26.9
Phvul.005G084700 Phaseolus vulgaris HOM05D005617 ORTHO05D006847 1.6e-06 57.8 131 34.4


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