Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 3.1e-187 658.3 330 100.0
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 3.1e-187 658.3 330 100.0
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-184 648.3 330 98.5
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 5.5e-184 647.5 330 98.5
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 5.5e-184 647.5 330 98.5
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 5.5e-184 647.5 330 97.0
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 1.1e-181 639.8 330 97.3
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 4.4e-181 637.9 330 96.7
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 1.2e-178 629.8 330 94.5
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 5.9e-178 627.5 330 94.2
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 7.7e-178 627.1 330 94.2
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 8.5e-177 623.6 330 93.3
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 9.5e-152 540.4 326 82.2
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 4.4e-149 531.6 323 80.5
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 6.4e-148 527.7 328 79.6
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 1.3e-145 520.0 321 78.2
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.3e-145 520.0 321 78.2
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 2.3e-145 519.2 325 79.4
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 3.0e-145 518.8 320 78.8
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 1.1e-144 516.9 320 78.4
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 1.9e-144 516.2 330 76.7
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.9e-144 516.2 330 76.7
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 2.5e-144 515.8 320 78.4
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 2.5e-144 515.8 330 76.4
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 9.5e-144 513.8 320 78.1
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 2.1e-143 512.7 330 76.1
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 6.2e-143 511.1 322 77.6
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 6.2e-143 511.1 330 76.1
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 3.1e-142 508.8 330 74.8
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 6.8e-142 507.7 329 79.0
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 8.9e-142 507.3 330 75.2
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 3.4e-141 505.4 324 76.9
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 3.4e-141 505.4 330 75.5
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 3.4e-141 505.4 328 75.9
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 1.3e-140 503.4 290 82.4
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 1.3e-140 503.4 322 75.8
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.3e-140 503.4 322 77.6
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 2.2e-140 502.7 328 75.3
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 8.3e-140 500.7 330 74.5
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 1.4e-139 500.0 328 75.0
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 5.4e-139 498.0 333 74.5
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 9.2e-139 497.3 325 75.7
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 6.0e-138 494.6 338 73.4
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.3e-137 493.4 338 73.4
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.0e-137 492.3 328 73.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 5.1e-137 491.5 328 73.5
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 5.6e-136 488.0 300 79.7
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 7.3e-136 487.6 332 73.5
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 1.6e-135 486.5 328 72.6
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 1.6e-135 486.5 334 71.6
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 3.1e-134 482.3 333 73.3
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 3.1e-134 482.3 333 73.3
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 5.2e-134 481.5 333 73.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 6.8e-134 481.1 325 73.8
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 8.9e-134 480.7 331 74.3
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 1.2e-133 480.3 330 72.7
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 4.4e-133 478.4 318 74.5
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 7.5e-133 477.6 330 73.0
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 9.9e-133 477.2 327 70.6
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 1.3e-132 476.9 339 71.7
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 6.4e-132 474.6 284 80.6
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 4.1e-131 471.9 335 70.1
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 4.1e-131 471.9 334 70.4
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 5.4e-131 471.5 284 79.6
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 9.2e-131 470.7 279 82.1
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 1.5e-128 463.4 288 78.5
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 4.7e-127 458.4 334 70.7
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 7.6e-125 451.1 320 71.6
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 6.4e-124 448.0 323 69.3
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 8.7e-121 437.6 436 56.7
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 9.6e-120 434.1 323 70.0
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 1.3e-119 433.7 285 76.5
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 2.8e-119 432.6 317 71.0
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 5.8e-117 424.9 398 58.0
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 1.3e-116 423.7 271 77.1
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 1.7e-116 423.3 286 71.7
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 4.9e-116 421.8 302 67.2
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 4.2e-115 418.7 341 64.2
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 7.1e-115 417.9 264 75.0
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 2.7e-114 416.0 271 74.5
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 8.7e-113 411.0 273 73.3
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 1.5e-112 410.2 261 76.6
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.8e-110 403.3 305 67.2
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 1.2e-109 400.6 242 79.3
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.0e-109 399.8 319 61.1
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 5.8e-109 398.3 294 68.4
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.1e-104 384.0 308 66.9
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 1.6e-103 380.2 325 61.8
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.6e-103 380.2 289 62.3
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 1.4e-102 377.1 330 61.2
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 3.8e-100 369.0 251 72.1
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 5.5e-99 365.2 295 58.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 9.3e-99 364.4 289 60.2
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 7.9e-98 361.3 326 59.8
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 3.0e-97 359.4 286 66.4
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.8e-94 350.1 261 64.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 3.8e-92 342.4 652 37.1
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-91 339.3 193 87.0
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.0e-85 320.1 321 55.8
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.3e-84 317.4 206 74.8
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 1.0e-81 307.8 291 56.4
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 8.8e-81 304.7 193 81.3
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 5.0e-76 288.9 232 66.4
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 2.3e-73 280.0 199 65.3
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 3.0e-73 279.6 312 53.2
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 2.4e-70 270.0 223 58.3
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 1.2e-66 257.7 145 85.5
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 2.1e-66 256.9 164 77.4
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.6e-66 256.1 178 69.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 8.2e-63 245.0 245 56.3
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 8.8e-57 224.9 330 44.8
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 1.5e-56 224.2 165 65.5
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 7.5e-56 221.9 171 64.9
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 5.5e-43 179.1 131 68.7
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 2.0e-40 170.6 101 78.2
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 2.7e-37 160.2 90 82.2
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 4.7e-34 149.4 272 36.8
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.3e-31 141.4 272 31.2
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 3.5e-29 133.3 92 67.4
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.1e-25 121.7 80 72.5
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 5.1e-20 102.8 357 25.5
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.5e-16 91.3 53 90.6
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 3.6e-10 70.1 46 73.9
BolC6t35198H Brassica oleracea HOM05D006118 ORTHO05D007750 1.4e-06 58.2 41 82.9
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 1.9e-06 57.8 80 38.8
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 7.1e-06 55.8 30 76.7


User provided reference genes

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