Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p03910 Brassica napus HOM05D009461 ORTHO05D002252 2.4e-40 168.3 82 100.0
BraA06t23599Z Brassica rapa HOM05D009461 ORTHO05D002252 2.4e-40 168.3 82 100.0
BolC6t35534H Brassica oleracea HOM05D009461 ORTHO05D002252 9.2e-40 166.4 82 98.8
BcaC08g43126 Brassica carinata HOM05D009461 ORTHO05D002252 4.6e-39 164.1 82 97.6
C06p04010 Brassica napus HOM05D009461 ORTHO05D002252 4.6e-39 164.1 82 97.6
BcaB07g33682 Brassica carinata HOM05D009461 ORTHO05D002252 1.1e-37 159.5 83 96.4
Thhalv10011902m.g Eutrema salsugineum HOM05D009461 ORTHO05D002252 1.8e-35 152.1 83 90.4
BcaC06g36704 Brassica carinata HOM05D009461 ORTHO05D002252 5.3e-35 150.6 83 89.2
C07p00920 Brassica napus HOM05D009461 ORTHO05D002252 5.3e-35 150.6 83 89.2
BolC7t40528H Brassica oleracea HOM05D009461 ORTHO05D002252 5.3e-35 150.6 83 89.2
A07p00480 Brassica napus HOM05D009461 ORTHO05D002252 6.9e-35 150.2 83 89.2
BraA07t27839Z Brassica rapa HOM05D009461 ORTHO05D002252 6.9e-35 150.2 83 89.2
AL1G56180 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 5.8e-34 147.1 80 83.8
AL1G56260 Arabidopsis lyrata HOM05D009461 ORTHO05D002252 1.3e-33 146.0 80 83.8
BcaC05g27512 Brassica carinata HOM05D009461 ORTHO05D002252 4.9e-33 144.1 83 88.0
C05p34820 Brassica napus HOM05D009461 ORTHO05D002252 4.9e-33 144.1 83 88.0
Sp1g36190 Schrenkiella parvula HOM05D009461 ORTHO05D002252 4.9e-33 144.1 83 88.0
C05p34800 Brassica napus HOM05D009461 ORTHO05D002252 2.4e-32 141.7 83 86.7
AT1G49310 Arabidopsis thaliana HOM05D009461 ORTHO05D002252 7.1e-32 140.2 79 81.0
CARHR039300 Cardamine hirsuta HOM05D009461 ORTHO05D002252 7.8e-31 136.7 79 82.3
BcaB04g17352 Brassica carinata HOM05D009461 ORTHO05D002252 3.9e-30 134.4 83 80.7
Carub.0001s3848 Capsella rubella HOM05D009461 ORTHO05D002252 3.9e-30 134.4 82 80.5
A08p04090 Brassica napus HOM05D009461 ORTHO05D002252 2.1e-28 128.6 83 77.1
BraA08t32434Z Brassica rapa HOM05D009461 ORTHO05D002252 2.1e-28 128.6 83 77.1
C08p04280 Brassica napus HOM05D009461 ORTHO05D002252 8.1e-28 126.7 83 75.9
BolC8t47231H Brassica oleracea HOM05D009461 ORTHO05D002252 8.1e-28 126.7 83 75.9
BcaC07g37067 Brassica carinata HOM05D009461 ORTHO05D002252 1.1e-27 126.3 83 75.9
Carub.0001s3849 Capsella rubella HOM05D009461 ORTHO05D002252 1.1e-27 126.3 84 72.6
Aa31LG10G4650 Aethionema arabicum HOM05D009461 ORTHO05D002252 1.4e-19 99.4 58 74.1
THA.LOC104821866 Tarenaya hassleriana HOM05D009461 ORTHO05D002252 5.5e-16 87.4 81 54.3
Sabra04G0101600 Salix brachista HOM05D007227 ORTHO05D002252 7.6e-10 67.0 71 53.5
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 1.9e-08 62.4 70 47.1
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 1.9e-08 62.4 72 47.2
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 5.5e-08 60.8 85 42.4
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 7.1e-08 60.5 80 42.5
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 1.2e-07 59.7 73 43.8
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.6e-07 59.3 74 41.9
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.6e-07 59.3 74 45.9
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 2.1e-07 58.9 74 41.9
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 2.7e-07 58.5 83 41.0
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 3.5e-07 58.2 71 42.3
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 3.5e-07 58.2 63 44.4
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 4.6e-07 57.8 76 40.8
Potri.004G153200 Populus trichocarpa HOM05D007227 ORTHO05D002252 4.6e-07 57.8 71 46.5
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 6.1e-07 57.4 77 42.9
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 6.1e-07 57.4 71 43.7
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 7.9e-07 57.0 72 38.9
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 7.9e-07 57.0 71 43.7
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 7.9e-07 57.0 69 44.9
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 7.9e-07 57.0 79 40.5
Sed0019925 Sechium edule HOM05D007227 ORTHO05D002252 1.3e-06 56.2 82 37.8
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 1.8e-06 55.8 80 38.8
Potri.009G114400 Populus trichocarpa HOM05D007227 ORTHO05D002252 2.3e-06 55.5 74 41.9
TWI75G0964 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 2.3e-06 55.5 71 47.9
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 3.0e-06 55.1 71 42.3
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 3.0e-06 55.1 73 39.7
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.0e-06 55.1 80 41.2
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 3.0e-06 55.1 71 38.0
Hund00277 Selenicereus undatus HOM05D013587 ORTHO05D002252 3.0e-06 55.1 74 40.5
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 3.9e-06 54.7 79 40.5
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.9e-06 54.7 80 41.2
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 3.9e-06 54.7 80 41.2
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 5.1e-06 54.3 76 42.1
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 5.1e-06 54.3 73 45.2
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 6.7e-06 53.9 78 42.3
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 6.7e-06 53.9 69 39.1
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 6.7e-06 53.9 80 36.2
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 6.7e-06 53.9 78 34.6
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 8.7e-06 53.5 69 40.6


User provided reference genes

Program Settings