Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p03010 Brassica napus HOM05D000033 ORTHO05D101154 9.5e-67 256.9 149 100.0
Sp1g37430 Schrenkiella parvula HOM05D000033 ORTHO05D001317 4.0e-09 65.5 50 72.0
AL1G58270 Arabidopsis lyrata HOM05D000033 ORTHO05D001317 6.9e-09 64.7 54 66.7
AT1G50610 Arabidopsis thaliana HOM05D000033 ORTHO05D001317 6.9e-09 64.7 54 66.7
BcaB02g11164 Brassica carinata HOM05D000033 ORTHO05D001317 2.6e-08 62.8 94 47.9
Carub.0001s3965 Capsella rubella HOM05D000033 ORTHO05D001317 3.4e-08 62.4 54 63.0
CARHR040660 Cardamine hirsuta HOM05D000033 ORTHO05D001317 3.4e-08 62.4 54 63.0
A05p20050 Brassica napus HOM05D000033 ORTHO05D001317 3.8e-07 58.9 50 64.0
BraA05t20911Z Brassica rapa HOM05D000033 ORTHO05D001317 3.8e-07 58.9 50 64.0
BcaC01g01237 Brassica carinata HOM05D000033 ORTHO05D001317 6.4e-07 58.2 67 58.2
BcaC05g27407 Brassica carinata HOM05D000033 ORTHO05D001317 6.4e-07 58.2 50 62.0
C03p89700 Brassica napus HOM05D000033 ORTHO05D001317 6.4e-07 58.2 67 58.2
BolC3t21286H Brassica oleracea HOM05D000033 ORTHO05D001317 6.4e-07 58.2 67 58.2
BcaC01g03575 Brassica carinata HOM05D000033 ORTHO05D001317 8.4e-07 57.8 50 64.0
C05p33530 Brassica napus HOM05D000033 ORTHO05D001317 8.4e-07 57.8 75 53.3
BolC5t32079H Brassica oleracea HOM05D000033 ORTHO05D001317 8.4e-07 57.8 75 53.3
Thhalv10012173m.g Eutrema salsugineum HOM05D000033 ORTHO05D001317 8.4e-07 57.8 67 56.7
A08p03110 Brassica napus HOM05D000033 ORTHO05D001317 1.4e-06 57.0 67 56.7
BraA08t32342Z Brassica rapa HOM05D000033 ORTHO05D001317 1.4e-06 57.0 67 56.7
BcaB04g17243 Brassica carinata HOM05D000033 ORTHO05D001317 1.9e-06 56.6 67 56.7
C03p50980 Brassica napus HOM05D000033 ORTHO05D001317 2.4e-06 56.2 50 62.0
BolC3t17382H Brassica oleracea HOM05D000033 ORTHO05D001317 2.4e-06 56.2 50 62.0
Aa31LG8G7010 Aethionema arabicum HOM05D000163 ORTHO05D000219 7.1e-06 54.7 54 53.7
Sp3g18220 Schrenkiella parvula HOM05D000033 ORTHO05D001317 7.1e-06 54.7 57 50.9
BcaB04g19095 Brassica carinata HOM05D000033 ORTHO05D001317 9.3e-06 54.3 50 60.0


User provided reference genes

Program Settings