Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.1e-184 649.8 321 100.0
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.1e-184 649.8 321 100.0
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.4e-184 649.4 321 99.7
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.8e-180 635.2 347 92.2
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 2.8e-177 625.2 321 96.3
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 7.0e-176 620.5 321 96.0
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 9.2e-176 620.2 321 96.0
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 3.5e-175 618.2 321 95.3
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.7e-174 615.9 321 95.0
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.1e-173 613.2 321 94.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.8e-163 579.3 324 88.9
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.0e-162 575.9 325 89.2
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 6.4e-161 570.9 323 88.9
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 3.1e-155 552.0 287 96.9
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 1.5e-146 523.1 311 82.0
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 7.6e-146 520.8 311 81.4
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.4e-144 516.5 311 81.0
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 5.4e-144 514.6 312 80.1
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.4e-144 514.6 312 80.1
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 6.0e-143 511.1 311 79.4
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 7.8e-143 510.8 312 79.8
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 3.9e-142 508.4 311 79.7
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.9e-141 506.1 311 80.1
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.5e-141 505.8 312 79.2
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.6e-140 503.1 311 79.1
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 2.1e-140 502.7 311 79.7
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.6e-140 501.9 318 78.6
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.4e-139 500.0 310 80.0
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 1.8e-139 499.6 311 77.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 5.3e-139 498.0 311 78.8
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.5e-138 496.5 318 78.0
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.6e-138 495.7 313 78.6
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 5.8e-138 494.6 311 78.8
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 7.6e-138 494.2 318 77.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.2e-137 492.7 313 78.3
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 6.4e-137 491.1 313 77.3
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 4.2e-136 488.4 311 76.5
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 4.2e-136 488.4 318 76.4
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 5.4e-136 488.0 321 76.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-135 486.5 313 76.7
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.7e-135 485.7 311 77.2
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 8.7e-134 480.7 312 76.0
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.1e-133 480.3 312 75.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 1.9e-133 479.6 328 72.9
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 9.6e-133 477.2 311 74.9
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.8e-132 475.7 312 74.7
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 3.6e-132 475.3 318 73.3
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 3.1e-131 472.2 322 73.3
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.2e-130 470.3 313 75.7
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 3.4e-130 468.8 316 73.4
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 4.5e-130 468.4 316 70.9
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 2.2e-129 466.1 328 72.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 3.8e-129 465.3 316 70.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 4.9e-129 464.9 319 70.5
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 6.4e-129 464.5 320 71.2
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 3.2e-128 462.2 312 73.4
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.2e-128 461.8 320 70.9
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.6e-127 459.9 341 68.0
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.7e-127 459.1 310 73.5
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 7.9e-127 457.6 336 69.0
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 7.9e-127 457.6 311 71.7
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.8e-126 456.4 313 70.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.9e-125 453.0 295 75.9
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 9.6e-125 450.7 279 80.3
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.2e-122 443.7 313 70.6
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.6e-122 441.0 321 68.5
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.1e-120 437.2 319 67.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 4.2e-120 435.3 312 66.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 7.1e-120 434.5 320 67.8
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 1.6e-119 433.3 319 66.1
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.1e-119 433.0 319 65.8
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.7e-119 432.6 319 66.1
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 3.0e-118 429.1 315 64.4
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 3.9e-118 428.7 319 64.6
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 8.7e-118 427.6 312 66.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 2.5e-117 426.0 319 65.8
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 5.3e-115 418.3 317 62.8
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.2e-114 417.2 291 70.1
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.5e-114 416.8 275 76.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 5.8e-114 414.8 340 61.2
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 7.6e-114 414.5 312 66.0
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.2e-113 412.9 319 64.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 6.7e-110 401.4 310 63.2
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 5.5e-104 381.7 314 61.1
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.7e-103 379.4 234 80.3
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 4.6e-103 378.6 251 74.1
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 7.4e-101 371.3 234 76.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 4.1e-99 365.5 316 61.4
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 4.5e-98 362.1 310 55.5
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 9.4e-96 354.4 296 56.8
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 1.5e-93 347.1 310 59.0
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 3.3e-93 345.9 321 56.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.2e-87 327.4 310 51.3
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 6.1e-87 325.1 309 50.5
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.4e-85 318.9 314 49.0
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.4e-85 318.9 314 49.0
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.0e-83 311.6 309 48.9
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 7.7e-82 308.1 257 58.0
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.0e-81 307.8 220 66.8
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-81 307.0 309 47.6
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-80 303.5 307 49.2
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.1e-79 298.5 309 47.9
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.6e-77 293.1 309 46.9
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.7e-77 292.0 308 47.7
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.8e-73 279.3 325 44.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.0e-70 271.2 312 49.4
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 1.8e-70 270.4 312 46.5
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.8e-59 233.8 213 52.6
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.7e-42 176.8 103 76.7
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.7e-31 139.4 114 60.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 7.6e-29 132.1 106 59.4
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 6.9e-06 55.8 49 55.1


User provided reference genes

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