Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p01600 Brassica napus HOM05D002312 ORTHO05D016109 1.2e-76 289.7 139 100.0
A02p22540 Brassica napus HOM05D002312 ORTHO05D016109 1.3e-54 216.5 138 79.7
C05p18650 Brassica napus HOM05D002312 ORTHO05D016109 2.0e-47 192.6 118 81.4
BraA02t07257Z Brassica rapa HOM05D002312 ORTHO05D016109 1.7e-46 189.5 121 77.7
C04p48880 Brassica napus HOM05D002312 ORTHO05D016109 1.0e-30 137.1 66 98.5
C06p32400 Brassica napus HOM05D002312 ORTHO05D016109 1.3e-25 120.2 79 75.9
BolC6t38362H Brassica oleracea HOM05D002312 ORTHO05D016109 1.5e-18 96.7 49 89.8
BcaB02g10786 Brassica carinata HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
BcaC08g44232 Brassica carinata HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
A05p17160 Brassica napus HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
C06p16370 Brassica napus HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
BolC6t36838H Brassica oleracea HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
BraA05t20618Z Brassica rapa HOM05D002312 ORTHO05D007981 3.9e-14 82.0 108 45.4
Aa31sc167G70 Aethionema arabicum HOM05D002312 ORTHO05D007981 1.5e-13 80.1 108 44.4
Cfa019434 Carpinus fangiana HOM05D002312 ORTHO05D007981 1.5e-13 80.1 71 57.7
Thhalv10011519m.g Eutrema salsugineum HOM05D002312 ORTHO05D007981 1.9e-13 79.7 108 44.4
Sp1g41660 Schrenkiella parvula HOM05D002312 ORTHO05D007981 1.9e-13 79.7 108 44.4
Peaxi162Scf00452g00847 Petunia axillaris HOM05D002312 ORTHO05D007981 2.5e-13 79.3 108 42.6
AL1G64300 Arabidopsis lyrata HOM05D002312 ORTHO05D007981 4.3e-13 78.6 46 78.3
AT1G56050 Arabidopsis thaliana HOM05D002312 ORTHO05D007981 4.3e-13 78.6 46 78.3
Carub.0001s4464 Capsella rubella HOM05D002312 ORTHO05D007981 4.3e-13 78.6 46 78.3
Lj3g0013391 Lotus japonicus HOM05D002312 ORTHO05D007981 5.6e-13 78.2 108 42.6
Manes.06G171400 Manihot esculenta HOM05D002312 ORTHO05D007981 5.6e-13 78.2 108 43.5
ECA240G2934 Erigeron canadensis HOM05D002312 ORTHO05D007981 7.3e-13 77.8 108 42.6
Lj1C905T5 Lonicera japonica HOM05D002312 ORTHO05D007981 7.3e-13 77.8 108 43.5
MD10G1202000 Malus domestica HOM05D002312 ORTHO05D007981 7.3e-13 77.8 108 43.5
Cc05_g16040 Coffea canephora HOM05D002312 ORTHO05D007981 9.6e-13 77.4 108 42.6
arahy.Tifrunner.gnm1.ann1.9G4NA9 Arachis hypogaea HOM05D002312 ORTHO05D007981 1.3e-12 77.0 108 42.6
MSTRG.13062 Avicennia marina HOM05D002312 ORTHO05D007981 1.3e-12 77.0 108 43.5
CARHR045770 Cardamine hirsuta HOM05D002312 ORTHO05D007981 1.3e-12 77.0 46 76.1
Nn7g37796 Nelumbo nucifera HOM05D002312 ORTHO05D007981 1.3e-12 77.0 71 57.7
Dinv42513 Davidia involucrata HOM05D002312 ORTHO05D007981 1.6e-12 76.6 108 43.5
Migut.H01695 Erythranthe guttata HOM05D002312 ORTHO05D007981 1.6e-12 76.6 108 42.6
Prupe.4G140300 Prunus persica HOM05D002312 ORTHO05D007981 1.6e-12 76.6 108 42.6
PGR031G3731 Punica granatum HOM05D002312 ORTHO05D007981 1.6e-12 76.6 71 57.7
Actinidia07349 Actinidia chinensis HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Duzib187G0190 Durio zibethinus HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Gohir.A04G050966 Gossypium hirsutum HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Gohir.D05G330100 Gossypium hirsutum HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Gorai.009G353700 Gossypium raimondii HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Phvul.011G174800 Phaseolus vulgaris HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Hund01729 Selenicereus undatus HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Thecc.07G153200 Theobroma cacao HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
unitig_744.g24502 Utricularia gibba HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 43.5
VMungo1127G0526 Vigna mungo HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 42.6
Zm00001eb059620 Zea mays HOM05D002312 ORTHO05D007981 2.1e-12 76.3 108 43.5
Cpa.g.sc10.42 Carica papaya HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
AUR62040884 Chenopodium quinoa HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
Eucgr.F03180 Eucalyptus grandis HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 43.5
FvH4_3g15830 Fragaria vesca HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
FAN11G0457 Fragaria x ananassa HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
FAN16G1092 Fragaria x ananassa HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
FAN21G2661 Fragaria x ananassa HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
Glyma.08G236400 Glycine max HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
Nitab4.5_0001749g0040 Nicotiana tabacum HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
RcHm_v2.0_Chr5g0026631 Rosa chinensis HOM05D002312 ORTHO05D007981 2.8e-12 75.9 108 42.6
CSS0000547 Camellia sinensis var. sinensis HOM05D002312 ORTHO05D007981 3.6e-12 75.5 71 53.5
CSS0003431 Camellia sinensis var. sinensis HOM05D002312 ORTHO05D007981 3.6e-12 75.5 71 53.5
CDE01G0809 Ceratophyllum demersum HOM05D002312 ORTHO05D007981 3.6e-12 75.5 108 41.7
Nitab4.5_0009317g0020 Nicotiana tabacum HOM05D002312 ORTHO05D007981 3.6e-12 75.5 108 41.7
Psat4g169960 Pisum sativum HOM05D002312 ORTHO05D007981 3.6e-12 75.5 108 42.6
THA.LOC104810259 Tarenaya hassleriana HOM05D002312 ORTHO05D007981 3.6e-12 75.5 108 42.6
CANSAT80G0083 Cannabis sativa HOM05D002312 ORTHO05D007981 4.8e-12 75.1 108 40.7
Lalb_Chr01g0007181 Lupinus albus HOM05D002312 ORTHO05D007981 4.8e-12 75.1 108 41.7
MD05G1219600 Malus domestica HOM05D002312 ORTHO05D007981 4.8e-12 75.1 108 41.7
HanXRQChr03g0078111 Helianthus annuus HOM05D002312 ORTHO05D007981 6.2e-12 74.7 108 42.6
Hma1.2p1_0637F.1_g193560 Hydrangea macrophylla HOM05D002312 ORTHO05D007981 6.2e-12 74.7 108 42.6
Oeu051662.1 Olea europaea HOM05D002312 ORTHO05D007981 6.2e-12 74.7 46 76.1
SGA_v2.0_scaffold713G53502 Striga asiatica HOM05D002312 ORTHO05D007981 6.2e-12 74.7 108 42.6
Atru.chr12.2173 Acer truncatum HOM05D002312 ORTHO05D007981 8.1e-12 74.3 46 73.9
Potri.001G457900 Populus trichocarpa HOM05D002312 ORTHO05D007981 8.1e-12 74.3 108 40.7
Sabra16G0310400 Salix brachista HOM05D002312 ORTHO05D007981 8.1e-12 74.3 108 40.7
Solyc07g066430.3 Solanum lycopersicum HOM05D002312 ORTHO05D007981 8.1e-12 74.3 108 42.6
Sopen07g034600 Solanum pennellii HOM05D002312 ORTHO05D007981 8.1e-12 74.3 108 42.6
PGSC0003DMG402022236 Solanum tuberosum HOM05D002312 ORTHO05D007981 8.1e-12 74.3 108 42.6
TWI38G0315 Tripterygium wilfordii HOM05D002312 ORTHO05D007981 8.1e-12 74.3 46 73.9
GSVIVG01020436001 Vitis vinifera HOM05D002312 ORTHO05D007981 8.1e-12 74.3 46 73.9
CAN.G943.35 Capsicum annuum HOM05D002312 ORTHO05D007981 1.1e-11 73.9 108 41.7
Ciclev10020166m.g Citrus clementina HOM05D002312 ORTHO05D007981 1.1e-11 73.9 46 73.9
ATR0763G215 Amborella trichopoda HOM05D002312 ORTHO05D007981 1.4e-11 73.6 108 42.6
EL10Ac1g00206 Beta vulgaris HOM05D002312 ORTHO05D007981 1.4e-11 73.6 108 40.7
BcaC05g25914 Brassica carinata HOM05D002312 ORTHO05D016109 1.4e-11 73.6 37 89.2
CiPaw.12G006300 Carya illinoinensis HOM05D002312 ORTHO05D007981 1.4e-11 73.6 108 41.7
Lsat_1_v5_gn_9_45640 Lactuca sativa HOM05D002312 ORTHO05D007981 1.4e-11 73.6 108 41.7
DCAR_013741 Daucus carota HOM05D002312 ORTHO05D007981 1.8e-11 73.2 46 71.7
Rhsim06G0238600 Rhododendron simsii HOM05D002312 ORTHO05D007981 1.8e-11 73.2 46 69.6
Sed0019011 Sechium edule HOM05D002312 ORTHO05D007981 1.8e-11 73.2 46 71.7
TPR.G9402 Trifolium pratense HOM05D002312 ORTHO05D007981 1.8e-11 73.2 108 40.7
ClCG11G016400 Citrullus lanatus HOM05D002312 ORTHO05D007981 2.4e-11 72.8 46 71.7
CsaV3_4G031850 Cucumis sativus L. HOM05D002312 ORTHO05D007981 2.4e-11 72.8 46 71.7
Aqoxy1G01461 Aquilegia oxysepala HOM05D002312 ORTHO05D007981 3.1e-11 72.4 108 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2664 Anthoceros agrestis HOM05D002312 ORTHO05D007981 4.0e-11 72.0 108 39.8
Ca_27307_v3 Cicer arietinum L. HOM05D002312 ORTHO05D007981 4.0e-11 72.0 108 39.8
HPP92_015923 Vanilla planifolia HOM05D002312 ORTHO05D007981 4.0e-11 72.0 108 40.7
TAR626G1371 Trochodendron aralioides HOM05D002312 ORTHO05D007981 5.3e-11 71.6 108 40.7
MELO3C010569.2 Cucumis melo HOM05D002312 ORTHO05D007981 1.2e-10 70.5 46 69.6
MBI02_g07511_MAGBIO Magnolia biondii HOM05D002312 ORTHO05D007981 2.0e-10 69.7 113 40.7
Pp3c6_25660 Physcomitrium patens HOM05D002312 ORTHO05D007981 3.4e-10 68.9 108 38.9
CBR_g41138 Chara braunii HOM05D002312 ORTHO05D007981 7.6e-10 67.8 108 39.8
PSO541G3034 Papaver somniferum HOM05D002312 ORTHO05D007981 7.6e-10 67.8 114 38.6
PSO675G8809 Papaver somniferum HOM05D002312 ORTHO05D007981 2.9e-09 65.9 114 37.7
Mapoly0084s0078 Marchantia polymorpha HOM05D002312 ORTHO05D007981 6.4e-09 64.7 46 63.0
SMO367G0264 Selaginella moellendorffii HOM05D002312 ORTHO05D007981 1.1e-08 63.9 46 60.9
arahy.Tifrunner.gnm1.ann1.PK5V4W Arachis hypogaea HOM05D002312 ORTHO05D007981 3.2e-08 62.4 48 58.3
QL04p073898 Quercus lobata HOM05D002312 ORTHO05D007981 1.2e-07 60.5 41 63.4
Zm00001eb112470 Zea mays HOM05D002312 ORTHO05D444348 1.6e-07 60.1 41 65.9
Sc20g0002970 Simmondsia chinensis HOM05D002312 ORTHO05D007981 1.0e-06 57.4 38 65.8
Cre13.g562150 Chlamydomonas reinhardtii HOM05D002312 ORTHO05D007981 1.3e-06 57.0 47 53.2
vmacro11661 Vaccinium macrocarpon HOM05D002312 ORTHO05D007981 1.3e-06 57.0 37 67.6
MCO16G421 Micromonas commoda HOM05D002312 ORTHO05D007981 1.7e-06 56.6 83 37.3
Haze_27258 Corylus avellana HOM05D002312 ORTHO05D007981 3.0e-06 55.8 108 33.3
PRCOL_00003893 Prasinoderma coloniale HOM05D002312 ORTHO05D007981 3.0e-06 55.8 46 47.8


User provided reference genes

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