Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-194 682.2 340 100.0
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 2.3e-140 502.7 334 78.1
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 3.6e-138 495.4 337 76.3
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 6.1e-138 494.6 337 75.7
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 1.0e-137 493.8 337 76.0
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 1.8e-137 493.0 337 75.1
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 4.0e-137 491.9 337 75.1
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 1.2e-128 463.8 345 71.6
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.9e-123 446.4 334 69.2
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.9e-118 429.9 320 70.3
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 3.0e-116 422.5 311 71.7
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 3.9e-116 422.2 333 65.8
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.9e-115 419.9 332 66.6
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 7.3e-115 417.9 332 66.6
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 5.2e-113 411.8 331 65.9
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 9.3e-110 401.0 289 69.9
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 5.6e-107 391.7 292 71.6
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 7.6e-104 381.3 261 77.4
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 2.1e-101 373.2 199 93.5
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 4.8e-74 282.3 326 47.9
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 2.5e-62 243.4 281 47.0
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.5e-54 217.6 289 42.2
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 4.0e-52 209.5 294 41.8
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 5.2e-52 209.1 294 41.8
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.5e-51 207.6 323 39.9
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 7.5e-51 205.3 318 39.9
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 9.7e-51 204.9 176 61.4
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.3e-50 204.5 319 38.6
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 1.7e-50 204.1 287 41.8
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 2.2e-50 203.8 325 39.4
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 6.3e-50 202.2 293 41.6
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 8.2e-50 201.8 284 42.6
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.1e-49 201.4 308 41.6
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 1.8e-49 200.7 284 42.3
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.2e-48 198.0 263 41.4
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 1.6e-48 197.6 311 39.9
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 2.6e-48 196.8 282 41.1
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 1.7e-47 194.1 273 39.6
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 2.2e-47 193.7 287 41.8
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 2.9e-47 193.4 318 38.7
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 6.5e-47 192.2 280 39.3
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 6.5e-47 192.2 276 42.0
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 1.5e-46 191.0 291 40.2
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 2.5e-46 190.3 344 36.3
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 5.5e-46 189.1 315 39.4
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 5.5e-46 189.1 286 42.0
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.2e-45 188.0 318 39.3
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.6e-45 187.6 280 42.1
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 6.1e-45 185.7 284 40.1
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 6.1e-45 185.7 284 40.1
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.0e-44 184.9 321 38.9
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 1.4e-44 184.5 278 42.1
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 1.8e-44 184.1 283 38.9
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.8e-44 184.1 281 40.2
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.8e-44 184.1 320 37.5
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 3.0e-44 183.3 340 37.1
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 5.2e-44 182.6 285 40.4
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 6.8e-44 182.2 278 39.2
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 1.5e-43 181.0 318 37.7
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 2.6e-43 180.3 293 39.6
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 4.4e-43 179.5 264 40.5
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 7.5e-43 178.7 305 41.3
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 6.3e-42 175.6 319 37.0
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 8.3e-42 175.3 322 37.3
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 1.2e-40 171.4 311 34.7
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 1.6e-40 171.0 282 36.9
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 2.7e-40 170.2 278 37.1
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 7.7e-40 168.7 280 39.3
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 5.0e-39 166.0 284 35.9
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 5.0e-39 166.0 287 37.3
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 8.5e-39 165.2 232 39.7
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 8.5e-39 165.2 235 39.6
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 1.1e-38 164.9 275 36.7
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.9e-38 164.1 275 37.5
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 4.2e-38 162.9 322 34.5
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.5e-38 162.5 232 39.2
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 5.5e-38 162.5 311 33.1
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 7.2e-38 162.2 287 36.6
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 9.4e-38 161.8 285 36.1
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 9.4e-38 161.8 291 35.7
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 1.2e-37 161.4 277 36.1
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 1.6e-37 161.0 278 36.7
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 2.1e-37 160.6 273 38.1
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 3.6e-37 159.8 268 37.3
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 1.4e-36 157.9 317 34.4
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.4e-36 157.9 311 34.7
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 1.4e-36 157.9 276 37.7
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.8e-36 157.5 315 36.2
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 4.0e-36 156.4 281 35.9
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 4.0e-36 156.4 276 36.2
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 5.2e-36 156.0 276 36.2
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 6.8e-36 155.6 209 41.6
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 6.8e-36 155.6 274 36.1
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 6.8e-36 155.6 326 35.9
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 2.0e-35 154.1 324 34.0
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 5.7e-35 152.5 277 36.8
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 7.5e-35 152.1 260 37.7
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.3e-34 151.4 270 38.1
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 8.3e-34 148.7 245 39.2
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 7.0e-33 145.6 271 36.2
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 5.9e-32 142.5 273 34.4
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.0e-31 141.7 284 33.8
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 1.7e-31 141.0 285 34.4
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 3.8e-31 139.8 259 34.4
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 5.0e-31 139.4 350 31.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 1.9e-30 137.5 285 35.1
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 4.7e-29 132.9 312 34.6
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.8e-28 131.0 311 34.4
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 2.3e-28 130.6 289 32.9
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 2.3e-28 130.6 249 29.3
BcaB07g33349 Brassica carinata HOM05D004843 ORTHO05D005833 1.2e-27 128.3 67 89.6
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 7.5e-27 125.6 283 31.8
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.1e-25 121.7 308 30.2
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 4.1e-25 119.8 269 32.0
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 9.2e-25 118.6 252 32.1
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 7.8e-24 115.5 317 29.7
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 9.5e-22 108.6 181 38.7
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 2.3e-20 104.0 133 45.1
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 7.5e-19 99.0 281 29.5
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.2e-18 97.4 134 39.6
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 2.0e-16 90.9 140 35.7
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 2.7e-16 90.5 280 28.2
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.7e-15 87.8 132 36.4
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 3.9e-15 86.7 136 39.7
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 1.5e-14 84.7 132 36.4
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 7.3e-14 82.4 177 33.9
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.2e-13 81.6 126 38.1
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 2.8e-13 80.5 211 29.4
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-11 74.3 136 35.3
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.2e-10 70.9 238 25.2
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 8.3e-10 68.9 95 42.1


User provided reference genes

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