Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p43980 Brassica napus HOM05D005127 ORTHO05D006022 4.8e-213 744.2 366 100.0
BolC5t35029H Brassica oleracea HOM05D005127 ORTHO05D006022 5.5e-209 730.7 366 98.4
C05p63600 Brassica napus HOM05D005127 ORTHO05D006022 1.2e-208 729.6 366 98.1
BcaC05g30528 Brassica carinata HOM05D005127 ORTHO05D006022 3.6e-208 728.0 366 97.8
BraSC90t46712Z Brassica rapa HOM05D005127 ORTHO05D006022 2.3e-207 725.3 369 97.0
Sp3g02250 Schrenkiella parvula HOM05D005127 ORTHO05D006022 9.7e-190 666.8 369 88.3
BcaC05g30317 Brassica carinata HOM05D005127 ORTHO05D006022 1.7e-189 666.0 366 90.2
Carub.0003s0236 Capsella rubella HOM05D005127 ORTHO05D006022 4.8e-189 664.5 370 87.6
AL3G12820 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 9.1e-188 660.2 370 87.6
AT3G03210 Arabidopsis thaliana HOM05D005127 ORTHO05D006022 3.5e-187 658.3 370 87.0
CARHR077230 Cardamine hirsuta HOM05D005127 ORTHO05D006022 1.3e-186 656.4 369 86.4
Thhalv10020974m.g Eutrema salsugineum HOM05D005127 ORTHO05D006022 5.5e-185 651.0 369 85.6
Aa31LG5G13690 Aethionema arabicum HOM05D005127 ORTHO05D006022 1.3e-181 639.8 370 84.6
THA.LOC104827223 Tarenaya hassleriana HOM05D005127 ORTHO05D006022 4.4e-158 561.6 370 75.4
Cpa.g.sc178.24 Carica papaya HOM05D005127 ORTHO05D006022 1.7e-154 549.7 370 72.7
Ciclev10012019m.g Citrus clementina HOM05D005127 ORTHO05D006022 5.6e-145 518.1 369 67.8
COL.COLO4_19768 Corchorus olitorius HOM05D005127 ORTHO05D006022 2.2e-141 506.1 375 65.1
Thecc.04G065100 Theobroma cacao HOM05D005127 ORTHO05D006022 6.4e-141 504.6 368 65.2
Atru.chr1.2154 Acer truncatum HOM05D005127 ORTHO05D006022 1.7e-138 496.5 368 66.0
TWI74G1018 Tripterygium wilfordii HOM05D005127 ORTHO05D006022 4.3e-137 491.9 370 64.1
Duzib138G1903 Durio zibethinus HOM05D005127 ORTHO05D006022 1.6e-136 490.0 370 63.8
Gohir.A07G074000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.1e-136 489.6 373 62.7
Gorai.001G083200 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.1e-136 489.6 373 63.0
Manes.10G079000 Manihot esculenta HOM05D005127 ORTHO05D006022 2.8e-136 489.2 375 62.9
Gohir.D07G078700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.6e-136 488.8 373 62.7
Gorai.002G111000 Gossypium raimondii HOM05D005127 ORTHO05D006022 2.0e-134 483.0 372 62.6
Gohir.D01G085400 Gossypium hirsutum HOM05D005127 ORTHO05D006022 1.7e-133 479.9 372 62.1
Gohir.A01G100900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 8.4e-133 477.6 372 62.4
Sabra17G0118000 Salix brachista HOM05D005127 ORTHO05D006022 1.5e-129 466.8 368 62.8
MELO3C020241.2 Cucumis melo HOM05D005127 ORTHO05D006022 4.3e-129 465.3 368 60.9
CsaV3_3G021100 Cucumis sativus L. HOM05D005127 ORTHO05D006022 4.3e-129 465.3 368 61.4
Potri.017G139800 Populus trichocarpa HOM05D005127 ORTHO05D006022 9.6e-129 464.2 368 62.0
CiPaw.03G076300 Carya illinoinensis HOM05D005127 ORTHO05D006022 8.1e-128 461.1 368 62.2
Sabra04G0053400 Salix brachista HOM05D005127 ORTHO05D006022 6.9e-127 458.0 370 61.9
Potri.004G080600 Populus trichocarpa HOM05D005127 ORTHO05D006022 1.5e-126 456.8 370 61.4
ClCG05G011360 Citrullus lanatus HOM05D005127 ORTHO05D006022 2.0e-126 456.4 368 59.5
Sed0023234 Sechium edule HOM05D005127 ORTHO05D006022 4.4e-126 455.3 368 60.6
Prupe.3G014700 Prunus persica HOM05D005127 ORTHO05D006022 7.9e-123 444.5 373 59.5
TAR371G0217 Trochodendron aralioides HOM05D005127 ORTHO05D006022 1.3e-122 443.7 369 60.7
Haze_14318 Corylus avellana HOM05D005127 ORTHO05D006022 8.7e-122 441.0 368 60.1
VMungo0647G1176 Vigna mungo HOM05D005127 ORTHO05D006022 1.9e-121 439.9 374 61.2
Cfa007754 Carpinus fangiana HOM05D005127 ORTHO05D006022 4.3e-121 438.7 368 59.5
CSS0034699 Camellia sinensis var. sinensis HOM05D005127 ORTHO05D006022 5.6e-121 438.3 374 59.9
MD09G1279600 Malus domestica HOM05D005127 ORTHO05D006022 1.3e-120 437.2 373 58.7
Aqoxy3G04119 Aquilegia oxysepala HOM05D005127 ORTHO05D006022 4.8e-120 435.3 368 57.6
Glyma.14G210400 Glycine max HOM05D005127 ORTHO05D006022 6.2e-120 434.9 376 59.6
Phvul.008G240900 Phaseolus vulgaris HOM05D005127 ORTHO05D006022 3.1e-119 432.6 374 60.4
RcHm_v2.0_Chr3g0488741 Rosa chinensis HOM05D005127 ORTHO05D006022 3.1e-119 432.6 368 58.7
Glyma.02G240800 Glycine max HOM05D005127 ORTHO05D006022 1.5e-118 430.3 377 58.6
PGR042G2448 Punica granatum HOM05D005127 ORTHO05D006022 3.4e-118 429.1 379 59.4
Lalb_Chr10g0104061 Lupinus albus HOM05D005127 ORTHO05D006022 1.3e-117 427.2 377 57.3
CANSAT21G1480 Cannabis sativa HOM05D005127 ORTHO05D006022 8.4e-117 424.5 368 57.3
Hma1.2p1_0158F.1_g069660 Hydrangea macrophylla HOM05D005127 ORTHO05D006022 1.2e-115 420.6 369 56.9
Eucgr.H04888 Eucalyptus grandis HOM05D005127 ORTHO05D006022 1.6e-115 420.2 379 58.0
FvH4_1g27360 Fragaria vesca HOM05D005127 ORTHO05D006022 1.6e-115 420.2 369 58.0
QL02p064340 Quercus lobata HOM05D005127 ORTHO05D006022 1.6e-115 420.2 359 59.1
FAN19G2113 Fragaria x ananassa HOM05D005127 ORTHO05D006022 3.5e-115 419.1 369 57.7
Lalb_Chr17g0345881 Lupinus albus HOM05D005127 ORTHO05D006022 3.5e-115 419.1 374 56.4
FAN23G3138 Fragaria x ananassa HOM05D005127 ORTHO05D006022 7.9e-115 417.9 369 57.7
FAN28G1653 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.8e-114 416.8 369 57.7
FAN28G2393 Fragaria x ananassa HOM05D005127 ORTHO05D006022 1.8e-114 416.8 369 57.7
Gorai.007G188500 Gossypium raimondii HOM05D005127 ORTHO05D006022 1.8e-114 416.8 367 55.0
Rhsim08G0021200 Rhododendron simsii HOM05D005127 ORTHO05D006022 5.1e-114 415.2 372 58.3
Ca_05761_v3 Cicer arietinum L. HOM05D005127 ORTHO05D006022 6.7e-114 414.8 383 57.4
Psat2g042880 Pisum sativum HOM05D005127 ORTHO05D006022 6.7e-114 414.8 379 56.5
Medtr5g076930 Medicago truncatula HOM05D005127 ORTHO05D006022 1.5e-113 413.7 377 56.5
PSO724G0684 Papaver somniferum HOM05D005127 ORTHO05D006022 1.9e-113 413.3 378 55.3
ATR0807G162 Amborella trichopoda HOM05D005127 ORTHO05D006022 9.6e-113 411.0 370 57.0
PSO729G0281 Papaver somniferum HOM05D005127 ORTHO05D006022 9.6e-113 411.0 378 54.8
TPR.G5353 Trifolium pratense HOM05D005127 ORTHO05D006022 6.2e-112 408.3 389 55.3
MBI06_g13889_MAGBIO Magnolia biondii HOM05D005127 ORTHO05D006022 1.1e-111 407.5 368 56.5
Actinidia35707 Actinidia chinensis HOM05D005127 ORTHO05D006022 1.4e-111 407.1 369 58.3
FAN26G1075 Fragaria x ananassa HOM05D005127 ORTHO05D006022 5.3e-111 405.2 368 56.0
Gohir.A11G169700 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.6e-110 402.9 353 54.7
Sopen03g005720 Solanum pennellii HOM05D005127 ORTHO05D006022 7.6e-110 401.4 374 55.6
Sopen02g025870 Solanum pennellii HOM05D005127 ORTHO05D006022 1.0e-109 401.0 376 55.6
Solyc03g031850.1 Solanum lycopersicum HOM05D005127 ORTHO05D006022 2.9e-109 399.4 374 55.3
PGSC0003DMG400042292 Solanum tuberosum HOM05D005127 ORTHO05D006022 4.9e-109 398.7 378 54.2
Nitab4.5_0000091g0380 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.9e-108 396.7 375 55.5
MSTRG.15431 Avicennia marina HOM05D005127 ORTHO05D006022 4.2e-108 395.6 371 55.8
Nitab4.5_0004645g0030 Nicotiana tabacum HOM05D005127 ORTHO05D006022 4.2e-108 395.6 375 55.5
Peaxi162Scf00521g00053 Petunia axillaris HOM05D005127 ORTHO05D006022 9.3e-108 394.4 372 55.6
PGSC0003DMG400016729 Solanum tuberosum HOM05D005127 ORTHO05D006022 9.3e-108 394.4 374 54.0
Migut.H02248 Erythranthe guttata HOM05D005127 ORTHO05D006022 4.6e-107 392.1 367 55.0
Sc09g0004500 Simmondsia chinensis HOM05D005127 ORTHO05D006022 4.6e-107 392.1 374 54.5
LjContig00141g0000865 Lotus japonicus HOM05D005127 ORTHO05D006022 6.0e-107 391.7 374 56.1
Nitab4.5_0007410g0020 Nicotiana tabacum HOM05D005127 ORTHO05D006022 1.8e-106 390.2 370 55.4
CAN.G404.4 Capsicum annuum HOM05D005127 ORTHO05D006022 6.7e-106 388.3 373 55.0
Cc07_g12800 Coffea canephora HOM05D005127 ORTHO05D006022 1.9e-105 386.7 373 54.7
SGA_v2.0_scaffold135G34932 Striga asiatica HOM05D005127 ORTHO05D006022 2.8e-104 382.9 375 52.3
Dinv19078 Davidia involucrata HOM05D005127 ORTHO05D006022 4.8e-104 382.1 368 53.3
GSVIVG01035235001 Vitis vinifera HOM05D005127 ORTHO05D006022 1.1e-103 380.9 367 55.6
HanXRQChr14g0443471 Helianthus annuus HOM05D005127 ORTHO05D006022 1.8e-103 380.2 366 54.1
Nitab4.5_0010422g0010 Nicotiana tabacum HOM05D005127 ORTHO05D006022 2.4e-103 379.8 364 53.3
Gohir.D11G175900 Gossypium hirsutum HOM05D005127 ORTHO05D006022 3.1e-103 379.4 367 52.6
Lj4P252T15 Lonicera japonica HOM05D005127 ORTHO05D006022 4.1e-103 379.0 352 54.8
CAN.G1681.7 Capsicum annuum HOM05D005127 ORTHO05D006022 1.2e-102 377.5 369 53.7
Oeu012525.1 Olea europaea HOM05D005127 ORTHO05D006022 2.0e-102 376.7 379 51.7
AUR62037482 Chenopodium quinoa HOM05D005127 ORTHO05D009825 1.4e-100 370.5 373 53.4
SHI30090 Sapria himalayana HOM05D005127 ORTHO05D006022 7.2e-100 368.2 368 51.1
Lsat_1_v5_gn_2_71721 Lactuca sativa HOM05D005127 ORTHO05D006022 9.3e-100 367.9 357 52.7
Oeu039702.1 Olea europaea HOM05D005127 ORTHO05D006022 1.5e-97 360.5 384 50.0
DCAR_003746 Daucus carota HOM05D005127 ORTHO05D006022 4.6e-91 339.0 356 47.5
SalBow3G1912 Salvia bowleyana HOM05D005127 ORTHO05D006022 8.2e-88 328.2 335 51.0
SalBow3G2114 Salvia bowleyana HOM05D005127 ORTHO05D006022 1.4e-87 327.4 335 51.0
SEGI_34462 Sequoiadendron giganteum HOM05D005127 ORTHO05D006022 2.3e-82 310.1 455 38.9
Zm00001eb393730 Zea mays HOM05D005127 ORTHO05D006022 3.9e-82 309.3 375 45.3
CDE01G0221 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 2.2e-77 293.5 298 50.3
Os10g0539400 Oryza sativa ssp. japonica HOM05D005127 ORTHO05D006022 2.2e-77 293.5 382 43.7
ECA238G3642 Erigeron canadensis HOM05D005127 ORTHO05D006022 4.2e-76 289.3 298 51.0
Mapoly0003s0310 Marchantia polymorpha HOM05D005127 ORTHO05D006022 1.8e-74 283.9 379 40.6
CDE02G3442 Ceratophyllum demersum HOM05D005127 ORTHO05D006022 2.8e-72 276.6 368 42.4
Zm00001eb022160 Zea mays HOM05D005127 ORTHO05D006022 4.8e-72 275.8 363 43.3
Migut.H02247 Erythranthe guttata HOM05D005127 ORTHO05D006022 1.2e-67 261.2 344 39.5
Oeu045801.1 Olea europaea HOM05D005127 ORTHO05D006022 3.6e-67 259.6 342 40.9
SMO141G0134 Selaginella moellendorffii HOM05D005127 ORTHO05D006022 8.3e-64 248.4 372 38.7
Pp3c8_14800 Physcomitrium patens HOM05D005127 ORTHO05D006022 5.9e-62 242.3 368 37.2
unitig_699.g19573 Utricularia gibba HOM05D005127 ORTHO05D006022 3.1e-55 219.9 233 53.2
Solyc02g081230.4 Solanum lycopersicum HOM05D005127 ORTHO05D006022 7.0e-55 218.8 182 57.7
AUR62004769 Chenopodium quinoa HOM05D005127 ORTHO05D006022 4.7e-51 206.1 204 50.5
HPP92_020636 Vanilla planifolia HOM05D005127 ORTHO05D006022 8.0e-51 205.3 203 46.3
AagrBONN_evm.TU.Sc2ySwM_228.805 Anthoceros agrestis HOM05D005127 ORTHO05D006022 1.1e-47 194.9 251 38.6
AagrBONN_evm.TU.Sc2ySwM_117.2318 Anthoceros agrestis HOM05D005127 ORTHO05D006022 3.6e-43 179.9 243 38.3
PSO063G7663 Papaver somniferum HOM05D005127 ORTHO05D006022 4.0e-42 176.4 175 54.9
CBR_g39794 Chara braunii HOM05D005127 ORTHO05D006022 4.7e-35 152.9 285 31.6
Gorai.004G162300 Gossypium raimondii HOM05D005127 ORTHO05D006022 8.1e-35 152.1 128 56.2
Lsat_1_v5_gn_2_6720 Lactuca sativa HOM05D005127 ORTHO05D006022 2.3e-34 150.6 162 46.3
Gorai.009G350000 Gossypium raimondii HOM05D000154 ORTHO05D006022 4.0e-34 149.8 128 54.7
AL3G25840 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 7.5e-33 145.6 96 76.0
AL8G37650 Arabidopsis lyrata HOM05D005127 ORTHO05D006022 7.5e-33 145.6 96 76.0
Gorai.005G117100 Gossypium raimondii HOM05D005127 ORTHO05D006022 4.1e-31 139.8 128 53.9
Lsat_1_v5_gn_5_127001 Lactuca sativa HOM05D005127 ORTHO05D006022 5.4e-31 139.4 143 47.6
Medtr5g076940 Medicago truncatula HOM05D005127 ORTHO05D006022 1.6e-27 127.9 108 57.4
MCO15G483 Micromonas commoda HOM05D005127 ORTHO05D006022 3.2e-23 113.6 288 26.7
Gohir.D05G325801 Gossypium hirsutum HOM05D000154 ORTHO05D006022 9.2e-23 112.1 91 56.0
Gorai.011G105200 Gossypium raimondii HOM05D000154 ORTHO05D006022 3.5e-22 110.2 88 56.8
Gohir.D08G156000 Gossypium hirsutum HOM05D005127 ORTHO05D006022 6.0e-22 109.4 91 54.9
RcHm_v2.0_Chr5g0027411 Rosa chinensis HOM05D005127 ORTHO05D006022 2.3e-21 107.5 254 33.1
RcHm_v2.0_Chr5g0042551 Rosa chinensis HOM05D005127 ORTHO05D006022 1.9e-20 104.4 109 47.7
Gorai.002G056700 Gossypium raimondii HOM05D005127 ORTHO05D006022 5.6e-20 102.8 91 51.6
A09p28600 Brassica napus HOM05D005127 ORTHO05D006022 1.6e-19 101.3 58 84.5
RcHm_v2.0_Chr4g0398381 Rosa chinensis HOM05D005127 ORTHO05D006022 1.4e-18 98.2 91 58.2
Gohir.D04G098033 Gossypium hirsutum HOM05D005127 ORTHO05D006022 2.4e-18 97.4 96 49.0
Gohir.D02G103100 Gossypium hirsutum HOM05D000154 ORTHO05D006022 1.1e-12 78.6 68 51.5
Dinv28241 Davidia involucrata HOM05D005127 ORTHO05D006022 3.3e-12 77.0 106 47.2
GSVIVG01034874001 Vitis vinifera HOM05D005127 ORTHO05D006022 5.6e-12 76.3 77 51.9
GSVIVG01000363001 Vitis vinifera HOM05D005127 ORTHO05D006022 2.8e-11 73.9 65 55.4
Nn2g14442 Nelumbo nucifera HOM05D005127 ORTHO05D006022 3.6e-11 73.6 45 82.2
GSVIVG01038053001 Vitis vinifera HOM05D005127 ORTHO05D006022 1.1e-10 72.0 59 57.6
vmacro09980 Vaccinium macrocarpon HOM05D000060 ORTHO05D003150 6.4e-08 62.8 78 42.3


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