Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 5.9e-97 357.5 172 100.0
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 5.9e-97 357.5 172 100.0
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 2.3e-96 355.5 172 99.4
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 5.6e-95 350.9 172 97.7
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 5.6e-95 350.9 172 97.7
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 6.8e-93 344.0 169 97.6
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 3.5e-89 331.6 170 93.5
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 5.9e-89 330.9 169 93.5
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 3.0e-88 328.6 169 91.7
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 3.9e-88 328.2 172 90.7
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 1.2e-86 323.2 169 92.3
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 2.3e-85 318.9 169 91.1
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 5.6e-71 271.2 166 78.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 3.6e-54 215.3 167 64.7
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 6.4e-43 177.9 164 53.7
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 1.1e-42 177.2 169 52.7
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 1.4e-42 176.8 169 53.3
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.4e-42 176.8 156 53.2
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.4e-42 176.8 156 53.2
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 1.9e-42 176.4 164 53.0
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 5.5e-42 174.9 167 52.7
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.2e-41 173.7 172 52.9
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 3.5e-41 172.2 141 56.7
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 4.6e-41 171.8 167 48.5
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 4.6e-41 171.8 168 53.6
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 4.6e-41 171.8 150 54.7
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 1.8e-40 169.9 156 51.9
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.3e-40 169.5 151 52.3
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.3e-40 169.5 147 55.1
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 3.0e-40 169.1 145 54.5
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 5.1e-40 168.3 158 50.6
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 6.7e-40 167.9 161 50.9
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 8.7e-40 167.5 175 49.1
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 8.7e-40 167.5 152 52.0
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.1e-39 167.2 141 58.2
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 1.1e-39 167.2 152 52.0
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 2.5e-39 166.0 172 51.7
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 2.5e-39 166.0 153 51.0
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 4.3e-39 165.2 157 52.2
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.3e-39 165.2 163 52.1
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 4.3e-39 165.2 163 52.1
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 4.3e-39 165.2 138 58.0
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 5.6e-39 164.9 146 54.8
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 9.6e-39 164.1 166 50.6
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.3e-38 163.7 135 57.0
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.6e-38 163.3 135 57.0
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.6e-38 163.3 161 52.8
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.6e-38 163.3 151 50.3
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.1e-38 162.9 154 51.3
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.1e-38 162.9 166 50.6
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 2.1e-38 162.9 135 57.0
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 2.8e-38 162.5 146 52.7
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 2.8e-38 162.5 142 54.2
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 4.8e-38 161.8 162 52.5
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 8.2e-38 161.0 153 52.3
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.1e-37 160.6 160 50.0
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 1.4e-37 160.2 162 50.6
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 1.4e-37 160.2 168 49.4
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.8e-37 159.8 162 49.4
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.4e-37 159.5 149 51.7
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 2.4e-37 159.5 163 51.5
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 4.0e-37 158.7 146 54.8
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 4.0e-37 158.7 136 54.4
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 6.9e-37 157.9 167 49.7
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 1.5e-36 156.8 146 52.7
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 2.0e-36 156.4 171 48.0
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 2.0e-36 156.4 158 50.0
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.0e-36 156.4 135 55.6
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 3.4e-36 155.6 147 53.7
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 5.8e-36 154.8 127 55.1
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 5.8e-36 154.8 146 52.7
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 7.6e-36 154.5 154 48.7
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.0e-35 154.1 156 49.4
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 2.2e-35 152.9 162 49.4
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 3.8e-35 152.1 162 49.4
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 3.8e-35 152.1 168 48.2
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 4.9e-35 151.8 132 55.3
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 4.9e-35 151.8 120 55.8
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 8.4e-35 151.0 140 50.0
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 8.4e-35 151.0 160 46.9
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 1.1e-34 150.6 120 55.0
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 1.9e-34 149.8 161 49.7
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 2.7e-33 146.0 117 59.8
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 1.3e-32 143.7 146 50.0
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 5.1e-32 141.7 137 49.6
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 6.7e-32 141.4 144 50.7
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 5.7e-31 138.3 139 48.9
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 4.1e-29 132.1 128 49.2
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 2.2e-27 126.3 112 50.9
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 7.7e-20 101.3 117 46.2
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 1.4e-18 97.1 161 37.9
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.1e-17 93.2 106 44.3
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 3.0e-16 89.4 74 55.4
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 5.1e-16 88.6 106 43.4
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 4.8e-14 82.0 70 52.9
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 1.4e-13 80.5 79 50.6
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 3.1e-13 79.3 66 51.5
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 5.9e-12 75.1 89 46.1


User provided reference genes

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