Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 9.4e-110 400.2 202 100.0
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 2.6e-107 392.1 202 98.0
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 3.1e-105 385.2 201 96.5
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 7.7e-104 380.6 201 96.0
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 7.2e-102 374.0 201 95.5
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 3.6e-85 318.5 200 82.0
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 5.7e-83 311.2 204 80.9
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 1.4e-73 280.0 203 73.4
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 2.1e-69 266.2 178 77.0
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 1.8e-68 263.1 203 69.5
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 7.5e-67 257.7 204 68.6
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 2.1e-61 239.6 235 59.1
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 6.8e-60 234.6 218 66.1
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 8.1e-53 211.1 219 58.4
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 2.0e-43 179.9 233 46.8
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.3e-42 177.2 206 50.0
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.9e-42 176.0 221 48.0
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 3.2e-41 172.6 234 45.7
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 4.2e-41 172.2 226 45.1
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.2e-41 172.2 228 47.4
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 4.6e-40 168.7 220 44.1
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 1.0e-39 167.5 216 44.9
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 3.0e-39 166.0 228 45.2
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 3.9e-39 165.6 234 44.4
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 3.9e-39 165.6 213 47.4
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 5.1e-39 165.2 205 46.8
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 2.1e-37 159.8 221 46.6
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 2.1e-37 159.8 228 44.3
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 2.1e-37 159.8 209 44.5
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 2.8e-37 159.5 214 43.5
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 3.6e-37 159.1 215 45.1
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 1.1e-36 157.5 220 42.7
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 1.1e-36 157.5 209 46.9
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 2.4e-36 156.4 215 48.4
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 4.0e-36 155.6 216 44.0
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 4.4e-35 152.1 199 44.2
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 9.9e-35 151.0 218 43.1
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.3e-34 150.6 223 39.5
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 1.7e-34 150.2 208 45.2
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 3.8e-34 149.1 216 44.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.4e-34 147.9 218 44.0
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 8.4e-34 147.9 214 41.6
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 2.4e-33 146.4 201 44.8
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.4e-33 146.4 204 46.6
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 4.2e-33 145.6 209 43.1
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 4.2e-33 145.6 282 35.5
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.4e-33 145.2 219 43.4
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 2.1e-32 143.3 199 45.2
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 2.7e-32 142.9 236 41.1
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 2.7e-32 142.9 172 50.6
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 4.6e-32 142.1 221 40.7
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 6.0e-32 141.7 164 49.4
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 1.0e-31 141.0 193 45.1
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 1.3e-31 140.6 259 38.2
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 3.0e-31 139.4 228 42.1
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 3.0e-31 139.4 144 51.4
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 1.1e-30 137.5 213 44.6
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 1.9e-30 136.7 159 47.8
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 2.5e-30 136.3 125 54.4
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 3.3e-30 136.0 103 62.1
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 5.6e-30 135.2 214 42.5
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 5.6e-30 135.2 208 40.9
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 5.6e-30 135.2 97 64.9
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 7.3e-30 134.8 193 42.0
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 7.3e-30 134.8 101 64.4
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 7.3e-30 134.8 222 41.0
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 9.6e-30 134.4 214 41.1
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 1.3e-29 134.0 217 40.1
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 4.8e-29 132.1 92 66.3
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 8.1e-29 131.3 226 40.3
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 2.4e-28 129.8 187 47.6
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 1.5e-27 127.1 95 62.1
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 1.5e-27 127.1 232 36.6
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 2.0e-27 126.7 102 56.9
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 2.0e-27 126.7 241 37.8
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 2.0e-27 126.7 228 38.6
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 4.5e-27 125.6 230 40.9
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 4.5e-27 125.6 218 39.0
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 7.6e-27 124.8 225 39.6
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 9.9e-27 124.4 230 40.0
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 9.9e-27 124.4 241 37.8
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 4.9e-26 122.1 104 56.7
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 7.1e-25 118.2 207 39.1
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.1e-25 118.2 203 38.9
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 7.1e-25 118.2 203 38.9
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 1.2e-24 117.5 237 40.1
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.6e-24 117.1 207 37.7
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 4.6e-24 115.5 149 43.0
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 1.8e-23 113.6 120 47.5
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 5.1e-23 112.1 130 49.2
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 6.7e-23 111.7 87 62.1
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 8.7e-23 111.3 101 51.5
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 9.6e-22 107.8 191 37.2
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 2.4e-20 103.2 130 43.1
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 5.3e-20 102.1 234 32.5
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 5.8e-19 98.6 156 37.2
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 3.2e-17 92.8 79 57.0
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 3.3e-14 82.8 188 33.5
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.6e-13 80.5 110 43.6
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 2.6e-11 73.2 198 30.8
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 2.5e-09 66.6 64 48.4
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 5.5e-09 65.5 64 45.3


User provided reference genes

Program Settings