Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 2.7e-126 455.3 224 100.0
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 2.8e-123 445.3 226 97.8
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.3e-120 436.4 224 94.6
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 2.0e-116 422.5 224 93.8
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 4.4e-116 421.4 226 92.9
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 1.1e-103 380.2 218 84.4
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 2.3e-101 372.5 224 83.9
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 5.4e-98 361.3 224 78.1
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 2.7e-97 359.0 225 78.2
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.5e-87 326.6 230 73.0
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.3e-85 319.3 221 73.3
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 4.9e-83 311.6 231 66.7
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 5.2e-61 238.4 220 54.5
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 5.2e-61 238.4 217 54.8
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 2.0e-60 236.5 221 54.3
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 4.4e-60 235.3 217 54.8
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 7.6e-60 234.6 217 54.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 1.3e-59 233.8 216 54.2
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.7e-59 233.4 218 54.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 2.2e-59 233.0 218 53.2
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 2.9e-59 232.6 224 54.9
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 3.7e-59 232.3 217 54.8
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 3.7e-59 232.3 220 55.9
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 3.7e-59 232.3 217 55.3
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 8.4e-59 231.1 218 53.2
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 3.2e-58 229.2 220 52.3
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 4.1e-58 228.8 223 52.0
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.1e-58 228.0 217 52.1
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 9.2e-58 227.6 222 55.0
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.2e-57 227.3 225 51.1
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 2.1e-57 226.5 216 54.6
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 2.7e-57 226.1 219 53.4
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 3.5e-57 225.7 222 53.6
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.3e-56 223.8 216 54.2
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 1.7e-56 223.4 228 53.1
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 2.3e-56 223.0 220 54.5
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.3e-56 223.0 225 51.6
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 3.0e-56 222.6 215 54.4
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 3.0e-56 222.6 235 50.2
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 6.6e-56 221.5 219 53.9
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 1.9e-55 219.9 220 52.3
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 4.3e-55 218.8 224 51.3
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 5.6e-55 218.4 220 50.9
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 5.6e-55 218.4 224 54.0
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 7.3e-55 218.0 222 52.3
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 7.3e-55 218.0 216 49.1
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 9.6e-55 217.6 220 50.5
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 9.6e-55 217.6 220 50.9
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 9.6e-55 217.6 221 49.8
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 1.2e-54 217.2 220 50.5
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 1.2e-54 217.2 224 50.4
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.6e-54 216.9 227 47.6
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.6e-54 215.7 219 50.2
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 3.6e-54 215.7 220 51.4
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 6.2e-54 214.9 218 49.5
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 8.1e-54 214.5 225 47.6
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 2.4e-53 213.0 224 50.4
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 4.0e-53 212.2 220 50.9
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 6.8e-53 211.5 219 50.7
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.0e-52 209.9 237 47.7
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 2.6e-52 209.5 215 51.2
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 7.6e-52 208.0 220 48.6
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 2.9e-51 206.1 223 48.0
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 2.9e-51 206.1 215 48.4
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 3.8e-51 205.7 214 46.7
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 3.8e-51 205.7 245 44.9
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 8.4e-51 204.5 220 49.5
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.4e-50 203.8 218 49.5
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.4e-50 203.8 223 50.7
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 4.2e-50 202.2 233 45.5
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 5.4e-50 201.8 215 50.2
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 2.1e-49 199.9 218 48.6
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 3.5e-49 199.1 244 44.3
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 3.5e-49 199.1 215 48.8
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 6.0e-49 198.4 142 64.1
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 1.0e-48 197.6 213 46.5
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 5.1e-48 195.3 215 47.9
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.1e-47 194.1 219 46.1
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 1.1e-47 194.1 218 46.8
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 2.5e-47 193.0 224 47.8
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.8e-46 188.7 140 62.9
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 4.8e-46 188.7 174 56.3
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 6.2e-46 188.3 182 54.9
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 3.1e-45 186.0 219 45.7
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 6.9e-45 184.9 221 46.2
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 2.0e-44 183.3 219 46.1
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 9.9e-44 181.0 213 45.1
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.3e-43 180.6 219 43.8
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 7.1e-42 174.9 155 57.4
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 6.0e-41 171.8 213 43.2
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 5.1e-40 168.7 170 51.8
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 1.2e-36 157.5 255 40.4
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 7.1e-34 148.3 121 67.8
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 7.9e-33 144.8 152 55.3
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.1e-31 141.0 117 55.6
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.1e-31 141.0 156 48.7
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 4.8e-30 135.6 120 54.2
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 4.0e-29 132.5 183 39.9
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 1.4e-26 124.0 177 37.3
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 1.5e-23 114.0 187 36.9
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 2.5e-23 113.2 117 46.2
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 1.3e-22 110.9 152 42.1
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 3.4e-20 102.8 146 43.8
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 4.5e-20 102.4 78 61.5
BcaC06g35868 Brassica carinata HOM05D000032 ORTHO05D027530 1.0e-19 101.3 66 80.3
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 3.9e-16 89.4 194 35.1
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.9e-15 87.0 61 59.0
BolC7t41477H Brassica oleracea HOM05D000032 ORTHO05D027530 5.7e-15 85.5 68 67.6
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 2.2e-14 83.6 106 37.7
SGA_v2.0_scaffold29G12307 Striga asiatica HOM05D007112 ORTHO05D008930 2.6e-12 76.6 146 34.9


User provided reference genes

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