Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p39990 Brassica napus HOM05D000327 ORTHO05D041580 2.3e-68 262.3 150 100.0
BraSC296t45959Z Brassica rapa HOM05D000327 ORTHO05D041580 3.4e-64 248.4 120 100.0
BraSC296t45961Z Brassica rapa HOM05D000327 ORTHO05D000218 5.6e-51 204.5 107 94.4
A05p39980 Brassica napus HOM05D000327 ORTHO05D000218 6.2e-50 201.1 108 90.7
A03p38710 Brassica napus HOM05D000327 ORTHO05D000218 1.5e-24 116.7 108 60.2
BraA03t13019Z Brassica rapa HOM05D000327 ORTHO05D000218 1.5e-24 116.7 108 60.2
BcaC05g29097 Brassica carinata HOM05D000327 ORTHO05D000218 3.4e-24 115.5 104 61.5
C05p53080 Brassica napus HOM05D000327 ORTHO05D000218 3.4e-24 115.5 104 61.5
BolC5t33988H Brassica oleracea HOM05D000327 ORTHO05D000218 3.4e-24 115.5 104 61.5
BcaC01g03947 Brassica carinata HOM05D000327 ORTHO05D000218 1.0e-23 114.0 108 59.3
AL3G26550 Arabidopsis lyrata HOM05D000327 ORTHO05D000218 1.1e-22 110.5 103 58.3
BraA05t22324Z Brassica rapa HOM05D000327 ORTHO05D000218 1.1e-22 110.5 104 61.5
BcaC01g03943 Brassica carinata HOM05D000327 ORTHO05D000218 1.4e-22 110.2 108 59.3
Sp3g12540 Schrenkiella parvula HOM05D000327 ORTHO05D000218 4.2e-22 108.6 104 59.6
C03p46840 Brassica napus HOM05D000327 ORTHO05D000218 5.5e-22 108.2 108 58.3
AT3G14250 Arabidopsis thaliana HOM05D000327 ORTHO05D000218 7.9e-21 104.4 104 53.8
BcaB04g18828 Brassica carinata HOM05D000327 ORTHO05D000218 2.3e-20 102.8 109 52.3
BcaC05g29621 Brassica carinata HOM05D000327 ORTHO05D000218 5.1e-20 101.7 58 84.5
Thhalv10022329m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 5.1e-20 101.7 104 56.7
BcaB06g25398 Brassica carinata HOM05D000327 ORTHO05D000218 1.9e-19 99.8 104 56.7
CARHR089170 Cardamine hirsuta HOM05D000327 ORTHO05D000218 1.4e-17 93.6 104 53.8
Carub.0003s1394 Capsella rubella HOM05D000327 ORTHO05D000218 1.8e-17 93.2 127 47.2
Thhalv10022375m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 1.9e-14 83.2 84 59.5
THA.LOC104810582 Tarenaya hassleriana HOM05D000327 ORTHO05D000218 9.3e-14 80.9 106 45.3
CARHR089180 Cardamine hirsuta HOM05D000327 ORTHO05D000218 1.4e-12 77.0 91 49.5
Thhalv10021980m.g Eutrema salsugineum HOM05D000327 ORTHO05D000218 1.5e-11 73.6 109 44.0
TWI23G1179 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 4.5e-08 62.0 102 38.2
Aa31LG8G1520 Aethionema arabicum HOM05D000327 ORTHO05D000218 2.9e-07 59.3 102 37.3
Glyma.16G012800 Glycine max HOM05D000327 ORTHO05D000218 1.1e-06 57.4 109 37.6
Peaxi162Scf00275g00003 Petunia axillaris HOM05D000327 ORTHO05D000218 1.4e-06 57.0 102 34.3
BolC3t16950H Brassica oleracea HOM05D000327 ORTHO05D000218 1.9e-06 56.6 50 60.0
FvH4_6g35700 Fragaria vesca HOM05D000327 ORTHO05D000218 1.9e-06 56.6 103 37.9
FAN05G1472 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.9e-06 56.6 103 37.9
FAN09G1662 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.9e-06 56.6 103 37.9
FAN14G5670 Fragaria x ananassa HOM05D000327 ORTHO05D000218 1.9e-06 56.6 103 37.9
arahy.Tifrunner.gnm1.ann1.XA1YL7 Arachis hypogaea HOM05D000327 ORTHO05D000218 4.2e-06 55.5 109 34.9
arahy.Tifrunner.gnm1.ann1.NE9TLW Arachis hypogaea HOM05D000327 ORTHO05D000218 5.5e-06 55.1 103 35.0
Dinv37827 Davidia involucrata HOM05D000327 ORTHO05D000218 5.5e-06 55.1 107 35.5
Prupe.3G031900 Prunus persica HOM05D000327 ORTHO05D000218 7.2e-06 54.7 106 36.8


User provided reference genes

Program Settings