Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 1.5e-171 606.3 351 100.0
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 2.1e-141 506.1 338 84.3
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.0e-141 504.2 357 84.9
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 7.5e-139 497.7 351 76.6
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.1e-137 493.8 399 76.9
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 4.7e-133 478.4 351 73.8
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 5.2e-132 474.9 352 73.0
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 5.4e-129 464.9 369 70.7
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 7.0e-129 464.5 344 73.8
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 2.6e-123 446.0 344 70.9
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 2.6e-123 446.0 351 70.9
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.9e-114 415.2 349 66.5
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.6e-112 408.7 352 65.6
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 4.6e-104 382.1 359 61.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 1.3e-85 320.9 346 53.8
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 1.6e-85 320.5 351 54.4
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.4e-84 317.4 351 55.8
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 2.4e-84 316.6 352 55.7
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.5e-83 313.9 352 55.4
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 2.0e-83 313.5 352 55.4
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 2.5e-81 306.6 346 54.6
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 7.9e-80 301.6 336 53.9
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.3e-79 300.8 330 51.2
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 2.6e-75 286.6 342 51.2
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.4e-73 280.8 255 65.1
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 1.9e-73 280.4 352 50.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 7.1e-73 278.5 352 50.0
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-72 276.9 340 50.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 3.5e-72 276.2 341 51.6
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 4.6e-72 275.8 351 49.0
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.1e-72 275.4 346 51.4
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.3e-71 274.2 345 50.1
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 1.9e-70 270.4 348 50.0
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.3e-69 267.7 367 49.3
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.3e-69 267.7 342 50.9
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.1e-68 264.6 348 46.6
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.8e-68 263.8 336 50.9
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.4e-68 263.5 336 51.2
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 4.1e-68 262.7 339 49.9
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 6.9e-68 261.9 333 49.8
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 6.9e-68 261.9 336 50.9
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 9.0e-68 261.5 337 48.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 9.0e-68 261.5 331 55.0
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 2.6e-67 260.0 338 50.0
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 7.7e-67 258.5 349 49.6
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.0e-66 258.1 334 48.8
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.7e-66 257.3 339 46.9
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 3.8e-66 256.1 349 46.1
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.5e-66 255.4 333 49.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 8.5e-66 255.0 339 48.7
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 1.1e-65 254.6 340 47.6
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.1e-65 254.6 340 46.8
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.1e-65 254.6 331 48.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.4e-65 254.2 351 46.7
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.9e-65 253.8 342 51.2
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.5e-65 253.4 355 47.9
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.2e-65 253.1 340 46.5
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 4.2e-65 252.7 364 51.4
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 9.4e-65 251.5 347 48.4
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 2.3e-63 246.9 342 49.7
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 5.1e-63 245.7 337 48.1
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 1.1e-62 244.6 335 44.5
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.5e-62 244.2 331 46.2
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.5e-62 244.2 331 46.2
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.5e-62 244.2 332 47.6
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.5e-62 244.2 355 51.8
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.0e-62 243.8 337 46.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.5e-62 243.4 333 49.2
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.7e-62 242.3 332 46.4
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 7.4e-62 241.9 339 43.4
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 8.2e-61 238.4 332 46.7
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.1e-60 238.0 333 45.9
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.8e-60 237.3 339 46.9
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 4.1e-60 236.1 129 85.3
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 5.3e-60 235.7 326 47.2
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 6.9e-60 235.3 335 44.2
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 9.1e-60 235.0 333 46.2
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.0e-59 233.8 365 48.5
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 2.6e-59 233.4 324 48.1
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 5.9e-59 232.3 307 49.5
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 7.7e-59 231.9 328 44.5
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 7.7e-59 231.9 326 46.9
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 3.0e-55 219.9 122 83.6
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 5.7e-54 215.7 352 42.9
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 1.3e-53 214.5 341 45.7
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.1e-52 211.5 343 41.7
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 9.1e-52 208.4 121 76.9
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.2e-50 203.8 107 86.0
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 1.2e-48 198.0 114 81.6
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.2e-48 198.0 124 75.8
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 8.8e-47 191.8 237 52.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.0e-46 190.7 360 39.7
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.8e-45 186.8 116 73.3
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 3.7e-45 186.4 163 58.3
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 6.3e-45 185.7 107 79.4
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.4e-44 183.7 98 85.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 9.1e-44 181.8 141 61.7
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 1.1e-41 174.9 165 60.0
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.2e-41 172.9 98 84.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 7.2e-41 172.2 125 69.6
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 8.8e-39 165.2 88 83.0
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.5e-38 164.5 140 56.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 5.4e-36 156.0 116 70.7
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 9.1e-36 155.2 284 40.5
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.7e-34 151.0 98 73.5
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.8e-34 149.8 98 70.4
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 8.8e-31 138.7 268 41.0
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.3e-23 114.0 255 38.8
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-13 81.3 77 54.5
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-13 81.3 77 54.5
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-13 81.3 77 54.5
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 2.2e-13 80.9 77 54.5
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 6.4e-13 79.3 239 34.3
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 1.1e-12 78.6 260 31.2
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.1e-12 78.6 82 53.7
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 9.2e-12 75.5 41 82.9
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.5e-09 65.5 234 38.0
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.8e-08 63.9 44 63.6
arahy.Tifrunner.gnm1.ann1.9RDP1W Arachis hypogaea HOM05D003961 ORTHO05D007352 9.8e-06 55.5 73 49.3


User provided reference genes

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