Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p37330 Brassica napus HOM05D007923 ORTHO05D009651 7.3e-98 360.5 178 100.0
BraA05t22530Z Brassica rapa HOM05D007923 ORTHO05D009651 7.3e-98 360.5 178 100.0
BcaC05g29300 Brassica carinata HOM05D007923 ORTHO05D009651 1.5e-87 326.2 178 90.4
C05p55840 Brassica napus HOM05D007923 ORTHO05D009651 1.5e-87 326.2 178 90.4
BolC5t34253H Brassica oleracea HOM05D007923 ORTHO05D009651 1.5e-87 326.2 178 90.4
BcaC05g29301 Brassica carinata HOM05D007923 ORTHO05D009651 3.7e-86 321.6 178 91.0
C05p55860 Brassica napus HOM05D007923 ORTHO05D009651 3.7e-86 321.6 178 91.0
BolC5t34255H Brassica oleracea HOM05D007923 ORTHO05D009651 3.7e-86 321.6 178 91.0
BcaC05g29302 Brassica carinata HOM05D007923 ORTHO05D009651 2.2e-62 242.7 160 75.6
C05p55870 Brassica napus HOM05D007923 ORTHO05D009651 2.2e-62 242.7 160 75.6
BolC5t34256H Brassica oleracea HOM05D007923 ORTHO05D009651 2.2e-62 242.7 160 75.6
BcaB06g25567 Brassica carinata HOM05D007923 ORTHO05D009651 2.1e-60 236.1 165 72.7
A05p37360 Brassica napus HOM05D007923 ORTHO05D009651 3.5e-60 235.3 160 73.1
BraA05t22535Z Brassica rapa HOM05D007923 ORTHO05D009651 3.5e-60 235.3 160 73.1
BcaC05g29304 Brassica carinata HOM05D007923 ORTHO05D009651 7.8e-60 234.2 160 73.8
A05p37350 Brassica napus HOM05D007923 ORTHO05D009651 7.8e-60 234.2 160 74.4
C05p55880 Brassica napus HOM05D007923 ORTHO05D009651 7.8e-60 234.2 160 73.8
BolC5t34257H Brassica oleracea HOM05D007923 ORTHO05D009651 7.8e-60 234.2 160 73.8
BraA05t22532Z Brassica rapa HOM05D007923 ORTHO05D009651 7.8e-60 234.2 160 74.4
BraA05t22534Z Brassica rapa HOM05D007923 ORTHO05D009651 3.9e-59 231.9 160 73.8
BraA05t22533Z Brassica rapa HOM05D007923 ORTHO05D009651 5.1e-59 231.5 160 73.1
A05p37340 Brassica napus HOM05D007923 ORTHO05D009651 8.7e-59 230.7 160 73.1
BraA05t22531Z Brassica rapa HOM05D007923 ORTHO05D009651 8.7e-59 230.7 160 73.1
C05p55890 Brassica napus HOM05D007923 ORTHO05D009651 1.9e-58 229.6 160 72.5
BolC5t34258H Brassica oleracea HOM05D007923 ORTHO05D009651 1.9e-58 229.6 160 72.5
BcaB06g25556 Brassica carinata HOM05D007923 ORTHO05D009651 1.3e-57 226.9 165 70.9
Sp3g10220 Schrenkiella parvula HOM05D007923 ORTHO05D009651 2.4e-56 222.6 179 63.1
AT1G47470 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 9.9e-55 217.2 175 60.0
CARHR086550 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.7e-54 216.5 175 58.3
AL3G23600 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 3.8e-54 215.3 175 60.6
BcaC05g29305 Brassica carinata HOM05D007923 ORTHO05D009651 2.1e-52 209.5 146 70.5
AT1G45190 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.5e-52 208.8 175 58.3
AT3G11990 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.0e-51 207.2 175 58.3
Carub.0008s0480 Capsella rubella HOM05D007923 ORTHO05D009651 1.5e-50 203.4 174 57.5
BcaC09g48206 Brassica carinata HOM05D007923 ORTHO05D009651 2.1e-49 199.5 178 60.1
Thhalv10022160m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 5.5e-45 184.9 178 56.2
BolC1t05274H Brassica oleracea HOM05D007923 ORTHO05D009651 3.0e-43 179.1 162 59.3
BraA01t04147Z Brassica rapa HOM05D007923 ORTHO05D009651 1.5e-42 176.8 162 58.0
CARHR179580 Cardamine hirsuta HOM05D007923 ORTHO05D009651 2.8e-41 172.6 169 50.9
AL1G53940 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.0e-40 168.7 175 50.3
AL9U10560 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 2.2e-38 162.9 178 52.2
Carub.0006s2829 Capsella rubella HOM05D007923 ORTHO05D009651 4.6e-36 155.2 176 47.7
C06p22200 Brassica napus HOM05D007923 ORTHO05D009651 1.0e-35 154.1 165 54.5
AT5G35405 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.0e-35 152.5 174 50.6
BcaB04g20407 Brassica carinata HOM05D007923 ORTHO05D009651 5.1e-35 151.8 169 51.5
AT4G13261 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 6.7e-35 151.4 174 50.6
BolC6t37406H Brassica oleracea HOM05D007923 ORTHO05D009651 1.5e-34 150.2 165 54.5
AT1G47450 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 2.5e-34 149.4 176 46.6
AL5G13890 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 5.7e-34 148.3 174 48.3
AT4G13263 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 5.7e-34 148.3 174 50.0
AL5G13880 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 7.4e-34 147.9 174 48.9
AL5G13870 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 1.5e-31 140.2 174 47.1
AT2G04037 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 4.5e-31 138.7 175 46.9
AL5G13900 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 8.5e-30 134.4 218 39.9
AT2G04031 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.2e-29 132.5 174 45.4
AL5G13910 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 4.2e-29 132.1 157 47.1
BcaC08g44686 Brassica carinata HOM05D007923 ORTHO05D009651 1.5e-26 123.6 87 66.7
AT2G04041 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 3.7e-25 119.0 175 42.9
THA.LOC104799715 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 1.0e-22 110.9 174 38.5
THA.LOC104810160 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 2.1e-20 103.2 138 39.9
BcaC09g48207 Brassica carinata HOM05D007923 ORTHO05D009651 2.7e-20 102.8 159 39.6
BcaC08g44685 Brassica carinata HOM05D007923 ORTHO05D009651 1.1e-18 97.4 69 75.4
C05p55910 Brassica napus HOM05D007923 ORTHO05D009651 1.1e-18 97.4 67 76.1
BolC5t34259H Brassica oleracea HOM05D007923 ORTHO05D009651 1.1e-18 97.4 67 76.1
Carub.0001s4211 Capsella rubella HOM05D007923 ORTHO05D009651 4.4e-18 95.5 162 34.0
C05p55900 Brassica napus HOM05D007923 ORTHO05D009651 1.5e-15 87.0 57 71.9
CARHR103140 Cardamine hirsuta HOM05D007923 ORTHO05D009651 4.5e-15 85.5 164 32.9
THA.LOC104824530 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 7.7e-15 84.7 170 30.6
Thhalv10012072m.g Eutrema salsugineum HOM05D007923 ORTHO05D009651 1.0e-14 84.3 110 37.3
CARHR043170 Cardamine hirsuta HOM05D007923 ORTHO05D009651 1.7e-14 83.6 162 29.6
Sp1g39520 Schrenkiella parvula HOM05D007923 ORTHO05D009651 1.7e-14 83.6 163 29.4
BcaC05g29303 Brassica carinata HOM05D007923 ORTHO05D009651 2.9e-14 82.8 50 86.0
AL1G61300 Arabidopsis lyrata HOM05D007923 ORTHO05D009651 6.5e-14 81.6 162 30.2
AT1G52970 Arabidopsis thaliana HOM05D007923 ORTHO05D009651 1.4e-13 80.5 123 31.7
COL.COLO4_10003 Corchorus olitorius HOM05D007923 ORTHO05D009651 8.0e-12 74.7 162 30.2
THA.LOC104817628 Tarenaya hassleriana HOM05D007923 ORTHO05D009976 8.2e-09 64.7 134 33.6
Cpa.g.sc4.156 Carica papaya HOM05D007923 ORTHO05D009651 3.1e-08 62.8 127 30.7
THA.LOC104813239 Tarenaya hassleriana HOM05D007923 ORTHO05D009651 5.3e-08 62.0 82 37.8
Thecc.05G151700 Theobroma cacao HOM05D001614 ORTHO05D000988 2.0e-07 60.1 88 34.1
QL02p094689 Quercus lobata HOM05D008402 ORTHO05D009651 2.6e-07 59.7 115 30.4
COL.COLO4_13737 Corchorus olitorius HOM05D001614 ORTHO05D000988 7.7e-07 58.2 80 31.2
Eucgr.C00224 Eucalyptus grandis HOM05D007923 ORTHO05D009651 7.7e-07 58.2 79 36.7
Eucgr.B01478 Eucalyptus grandis HOM05D013157 ORTHO05D017001 8.5e-06 54.7 79 34.2


User provided reference genes

Program Settings