Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p35340 Brassica napus HOM05D004368 ORTHO05D004990 3.5e-175 618.2 319 100.0
BraA05t22344Z Brassica rapa HOM05D004368 ORTHO05D004990 3.5e-175 618.2 319 100.0
C05p53530 Brassica napus HOM05D004368 ORTHO05D004990 6.1e-148 527.7 322 87.3
BolC5t34030H Brassica oleracea HOM05D004368 ORTHO05D004990 6.1e-148 527.7 322 87.3
CARHR088970 Cardamine hirsuta HOM05D004368 ORTHO05D004990 2.3e-139 499.2 322 80.7
Thhalv10021156m.g Eutrema salsugineum HOM05D004368 ORTHO05D004990 7.5e-138 494.2 322 81.4
BcaC05g29122 Brassica carinata HOM05D004368 ORTHO05D004990 2.2e-137 492.7 322 82.3
Sp3g12370 Schrenkiella parvula HOM05D004368 ORTHO05D004990 1.9e-136 489.6 330 79.4
AT3G14110 Arabidopsis thaliana HOM05D004368 ORTHO05D004990 5.4e-136 488.0 322 80.7
BolC3t16938H Brassica oleracea HOM05D004368 ORTHO05D004990 2.3e-134 482.6 330 80.9
BcaC01g03958 Brassica carinata HOM05D004368 ORTHO05D004990 3.9e-134 481.9 324 82.1
BraA03t13009Z Brassica rapa HOM05D004368 ORTHO05D004990 4.3e-133 478.4 329 80.2
C03p46730 Brassica napus HOM05D004368 ORTHO05D004990 7.3e-133 477.6 325 81.8
A03p38620 Brassica napus HOM05D004368 ORTHO05D004990 1.2e-132 476.9 323 81.1
BcaB04g18818 Brassica carinata HOM05D004368 ORTHO05D004990 2.0e-130 469.5 323 79.3
Carub.0003s1372 Capsella rubella HOM05D004368 ORTHO05D004990 6.0e-127 458.0 323 77.4
Aa31LG8G1340 Aethionema arabicum HOM05D004368 ORTHO05D004990 2.2e-121 439.5 332 75.0
AL3G26340 Arabidopsis lyrata HOM05D004368 ORTHO05D004990 4.3e-101 372.1 223 87.4
THA.LOC104822665 Tarenaya hassleriana HOM05D004368 ORTHO05D004990 4.8e-100 368.6 342 62.0
Thecc.06G124200 Theobroma cacao HOM05D004368 ORTHO05D004990 3.3e-93 345.9 264 72.3
Potri.001G166000 Populus trichocarpa HOM05D004368 ORTHO05D004990 2.1e-92 343.2 333 61.3
Sc15g0000580 Simmondsia chinensis HOM05D004368 ORTHO05D004990 4.8e-92 342.0 247 73.3
Ah.15g095150 Amaranthus hybridus HOM05D004368 ORTHO05D004990 1.1e-91 340.9 225 78.7
Gorai.009G145200 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.4e-91 340.5 258 70.9
QL05p003761 Quercus lobata HOM05D004368 ORTHO05D004990 1.8e-91 340.1 228 76.3
CSS0030612 Camellia sinensis var. sinensis HOM05D004368 ORTHO05D004990 3.1e-91 339.3 244 72.5
Manes.11G016500 Manihot esculenta HOM05D004368 ORTHO05D004990 3.1e-91 339.3 232 76.3
Duzib235G0527 Durio zibethinus HOM05D004368 ORTHO05D004990 4.1e-91 339.0 259 71.4
Cc06_g01580 Coffea canephora HOM05D004368 ORTHO05D004990 5.3e-91 338.6 228 75.9
Actinidia32205 Actinidia chinensis HOM05D004368 ORTHO05D004990 9.0e-91 337.8 257 69.3
Haze_16075 Corylus avellana HOM05D004368 ORTHO05D004990 9.0e-91 337.8 325 62.2
FvH4_6g35160 Fragaria vesca HOM05D004368 ORTHO05D004990 1.5e-90 337.0 232 76.3
Sed0018133 Sechium edule HOM05D004368 ORTHO05D004990 2.0e-90 336.7 322 61.5
GSVIVG01016719001 Vitis vinifera HOM05D004368 ORTHO05D004990 2.0e-90 336.7 233 76.0
CiPaw.01G216100 Carya illinoinensis HOM05D004368 ORTHO05D004990 2.6e-90 336.3 233 75.1
DCAR_016106 Daucus carota HOM05D004368 ORTHO05D004990 2.6e-90 336.3 223 78.0
FAN09G0342 Fragaria x ananassa HOM05D004368 ORTHO05D004990 4.5e-90 335.5 229 76.4
ClCG07G014470 Citrullus lanatus HOM05D004368 ORTHO05D004990 7.6e-90 334.7 233 76.8
Duzib160G0466 Durio zibethinus HOM05D004368 ORTHO05D004990 1.0e-89 334.3 256 71.1
MD09G1178400 Malus domestica HOM05D004368 ORTHO05D004990 1.3e-89 334.0 230 76.5
Actinidia21803 Actinidia chinensis HOM05D004368 ORTHO05D004990 2.2e-89 333.2 257 69.6
CsaV3_3G030850 Cucumis sativus L. HOM05D000945 ORTHO05D000919 2.2e-89 333.2 233 76.0
TPR.G29997 Trifolium pratense HOM05D004368 ORTHO05D004990 2.2e-89 333.2 227 75.3
MELO3C022680.2 Cucumis melo HOM05D004368 ORTHO05D004990 2.9e-89 332.8 233 76.0
Ciclev10026090m.g Citrus clementina HOM05D004368 ORTHO05D004990 6.5e-89 331.6 328 57.9
FAN02G3674 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.5e-89 331.6 233 74.7
FAN05G4100 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.5e-89 331.6 233 74.7
Nitab4.5_0003342g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 6.5e-89 331.6 227 75.8
RcHm_v2.0_Chr2g0146421 Rosa chinensis HOM05D004368 ORTHO05D004990 6.5e-89 331.6 233 75.1
TAR626G1097 Trochodendron aralioides HOM05D004368 ORTHO05D004990 8.4e-89 331.3 227 75.3
Hma1.2p1_0414F.1_g147650 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.1e-88 330.9 241 71.8
Cpa.g.sc25.148 Carica papaya HOM05D004368 ORTHO05D004990 1.4e-88 330.5 214 79.4
Gohir.D05G141000 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.4e-88 330.5 228 76.3
MD17G1148400 Malus domestica HOM05D004368 ORTHO05D004990 1.4e-88 330.5 322 59.0
Peaxi162Scf00043g02929 Petunia axillaris HOM05D004368 ORTHO05D004990 1.9e-88 330.1 231 75.3
DCAR_022662 Daucus carota HOM05D004368 ORTHO05D004990 2.5e-88 329.7 223 77.6
MBI02_g13231_MAGBIO Magnolia biondii HOM05D004368 ORTHO05D004990 2.5e-88 329.7 245 72.7
Rhsim08G0241200 Rhododendron simsii HOM05D004368 ORTHO05D004990 2.5e-88 329.7 225 75.6
Gohir.A05G138800 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.2e-88 329.3 228 76.3
Nitab4.5_0000845g0110 Nicotiana tabacum HOM05D004368 ORTHO05D004990 3.2e-88 329.3 244 71.7
AUR62001444 Chenopodium quinoa HOM05D004368 ORTHO05D004990 4.2e-88 328.9 308 60.4
Eucgr.F02457 Eucalyptus grandis HOM05D004368 ORTHO05D004990 4.2e-88 328.9 319 59.6
PGR119G1615 Punica granatum HOM05D004368 ORTHO05D004990 5.5e-88 328.6 227 74.4
TWI23G0003 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 7.2e-88 328.2 224 75.9
vmacro06407 Vaccinium macrocarpon HOM05D004368 ORTHO05D004990 7.2e-88 328.2 227 74.9
COL.COLO4_30792 Corchorus olitorius HOM05D004368 ORTHO05D004990 9.3e-88 327.8 228 75.9
Psat4g167320 Pisum sativum HOM05D004368 ORTHO05D004990 1.2e-87 327.4 228 75.4
EL10Ac7g16443 Beta vulgaris HOM05D004368 ORTHO05D004990 1.6e-87 327.0 248 70.6
AUR62009921 Chenopodium quinoa HOM05D004368 ORTHO05D004990 1.6e-87 327.0 224 75.9
Hund18675 Selenicereus undatus HOM05D004368 ORTHO05D004990 2.1e-87 326.6 228 75.0
Lj3g0026199 Lotus japonicus HOM05D004368 ORTHO05D004990 3.5e-87 325.9 227 75.8
FAN14G3095 Fragaria x ananassa HOM05D004368 ORTHO05D004990 6.1e-87 325.1 256 69.1
HanXRQChr15g0497161 Helianthus annuus HOM05D004368 ORTHO05D004990 6.1e-87 325.1 226 74.3
Lj9C535T4 Lonicera japonica HOM05D004368 ORTHO05D004990 7.9e-87 324.7 223 75.3
Ca_23409_v3 Cicer arietinum L. HOM05D004368 ORTHO05D004990 1.0e-86 324.3 227 74.9
Medtr8g022040 Medicago truncatula HOM05D004368 ORTHO05D004990 1.0e-86 324.3 221 77.4
ATR0568G120 Amborella trichopoda HOM05D004368 ORTHO05D004990 3.0e-86 322.8 235 71.9
CAN.G1487.1 Capsicum annuum HOM05D004368 ORTHO05D004990 1.9e-85 320.1 227 73.6
Hma1.2p1_0311F.1_g121230 Hydrangea macrophylla HOM05D004368 ORTHO05D004990 1.9e-85 320.1 240 71.2
CAN.G941.28 Capsicum annuum HOM05D004368 ORTHO05D004990 4.3e-85 318.9 223 74.4
Gorai.010G235500 Gossypium raimondii HOM05D004368 ORTHO05D004990 4.3e-85 318.9 233 73.4
Lj5A32G57 Lonicera japonica HOM05D004368 ORTHO05D004990 4.3e-85 318.9 224 74.1
Nn8g38578 Nelumbo nucifera HOM05D004368 ORTHO05D004990 5.7e-85 318.5 222 75.2
Peaxi162Scf01157g00111 Petunia axillaris HOM05D004368 ORTHO05D004990 5.7e-85 318.5 223 74.4
VMungo0540G1553 Vigna mungo HOM05D004368 ORTHO05D004990 5.7e-85 318.5 228 74.6
ECA248G3608 Erigeron canadensis HOM05D004368 ORTHO05D004990 7.4e-85 318.2 252 68.7
Glyma.16G010200 Glycine max HOM05D004368 ORTHO05D004990 7.4e-85 318.2 228 74.1
TAR468G0014 Trochodendron aralioides HOM05D004368 ORTHO05D004990 9.7e-85 317.8 227 71.8
Gohir.D06G201700 Gossypium hirsutum HOM05D004368 ORTHO05D004990 1.3e-84 317.4 233 73.0
Solyc09g072880.3 Solanum lycopersicum HOM05D004368 ORTHO05D004990 1.3e-84 317.4 234 71.4
PGSC0003DMG400003792 Solanum tuberosum HOM05D004368 ORTHO05D004990 1.3e-84 317.4 225 74.2
Glyma.07G041700 Glycine max HOM05D004368 ORTHO05D004990 1.6e-84 317.0 228 74.1
Sopen06g002970 Solanum pennellii HOM05D004368 ORTHO05D004990 1.6e-84 317.0 223 73.5
Sopen09g028680 Solanum pennellii HOM05D004368 ORTHO05D004990 1.6e-84 317.0 225 74.2
Sopen09g028700 Solanum pennellii HOM05D004368 ORTHO05D004990 1.6e-84 317.0 225 74.2
Phvul.006G206500 Phaseolus vulgaris HOM05D004368 ORTHO05D004990 2.8e-84 316.2 228 75.0
Solyc06g008160.4 Solanum lycopersicum HOM05D004368 ORTHO05D004990 2.8e-84 316.2 223 73.5
SalBow5G3644 Salvia bowleyana HOM05D004368 ORTHO05D004990 3.7e-84 315.8 294 60.2
Gohir.A06G193900 Gossypium hirsutum HOM05D004368 ORTHO05D004990 4.8e-84 315.5 229 73.4
Lalb_Chr17g0343461 Lupinus albus HOM05D004368 ORTHO05D004990 1.1e-83 314.3 254 67.3
SalBow5G0362 Salvia bowleyana HOM05D004368 ORTHO05D004990 1.8e-83 313.5 294 59.9
ECA247G3177 Erigeron canadensis HOM05D004368 ORTHO05D004990 2.4e-83 313.2 233 69.5
Aqoxy7G01007 Aquilegia oxysepala HOM05D004368 ORTHO05D004990 4.1e-83 312.4 229 72.1
Lsat_1_v5_gn_4_91400 Lactuca sativa HOM05D004368 ORTHO05D004990 9.0e-83 311.2 218 74.8
PSO386G0078 Papaver somniferum HOM05D004368 ORTHO05D004990 2.0e-82 310.1 293 58.0
unitig_27.g24839 Utricularia gibba HOM05D004368 ORTHO05D004990 5.9e-82 308.5 226 70.4
PSO724G0024 Papaver somniferum HOM05D004368 ORTHO05D004990 1.3e-81 307.4 231 69.7
unitig_27.g24862 Utricularia gibba HOM05D004368 ORTHO05D004990 1.3e-81 307.4 226 69.9
Oeu064511.1 Olea europaea HOM05D004368 ORTHO05D004990 2.9e-81 306.2 212 75.5
HanXRQChr09g0277121 Helianthus annuus HOM05D004368 ORTHO05D004990 1.1e-80 304.3 222 70.3
Migut.L01998 Erythranthe guttata HOM05D004368 ORTHO05D004990 3.2e-80 302.8 229 70.3
unitig_699.g19383 Utricularia gibba HOM05D004368 ORTHO05D004990 7.2e-80 301.6 226 68.6
Sabra01G0127300 Salix brachista HOM05D004368 ORTHO05D004990 1.2e-79 300.8 294 59.9
CANSAT56G3889 Cannabis sativa HOM05D004368 ORTHO05D004990 6.1e-79 298.5 233 69.1
HPP92_003012 Vanilla planifolia HOM05D004368 ORTHO05D004990 1.8e-78 297.0 229 71.2
CDE05G2024 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 8.8e-78 294.7 224 70.5
Lalb_Chr04g0253731 Lupinus albus HOM05D004368 ORTHO05D004990 5.7e-77 292.0 221 70.1
arahy.Tifrunner.gnm1.ann1.26KYL2 Arachis hypogaea HOM05D004368 ORTHO05D004990 9.7e-77 291.2 229 68.6
CDE04G0878 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 9.7e-77 291.2 219 69.4
Os01g0510600 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 2.2e-76 290.0 222 69.4
Zm00001eb308830 Zea mays HOM05D004368 ORTHO05D004990 2.8e-76 289.7 222 68.9
arahy.Tifrunner.gnm1.ann1.AFL61P Arachis hypogaea HOM05D004368 ORTHO05D004990 3.1e-75 286.2 177 80.2
Nn6g35672 Nelumbo nucifera HOM05D004368 ORTHO05D004990 6.9e-75 285.0 199 73.4
Atru.chr1.4073 Acer truncatum HOM05D004368 ORTHO05D004990 1.2e-74 284.3 177 83.1
Nitab4.5_0006980g0020 Nicotiana tabacum HOM05D004368 ORTHO05D004990 3.3e-69 266.2 169 79.9
Gorai.004G102400 Gossypium raimondii HOM05D004368 ORTHO05D004990 1.4e-67 260.8 190 74.2
Nitab4.5_0000326g0270 Nicotiana tabacum HOM05D004368 ORTHO05D004990 2.2e-65 253.4 166 77.7
Os02g0586800 Oryza sativa ssp. japonica HOM05D004368 ORTHO05D004990 3.2e-64 249.6 220 63.2
Atru.chr1.4083 Acer truncatum HOM05D004368 ORTHO05D004990 3.7e-60 236.1 202 66.3
Gohir.D08G096333 Gossypium hirsutum HOM05D004368 ORTHO05D004990 3.7e-60 236.1 190 70.0
Dinv37846 Davidia involucrata HOM05D004368 ORTHO05D004990 4.8e-60 235.7 173 71.1
Gorai.001G096600 Gossypium raimondii HOM05D004368 ORTHO05D004990 6.3e-60 235.3 212 63.7
Gohir.D07G090325 Gossypium hirsutum HOM05D004368 ORTHO05D004990 4.1e-59 232.6 173 72.8
Mapoly0108s0002 Marchantia polymorpha HOM05D004368 ORTHO05D004990 3.5e-58 229.6 227 57.7
Mapoly0110s0050 Marchantia polymorpha HOM05D004368 ORTHO05D004990 3.5e-58 229.6 227 57.7
SGA_v2.0_scaffold110G31269 Striga asiatica HOM05D004368 ORTHO05D004990 7.7e-58 228.4 312 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3011 Anthoceros agrestis HOM05D004368 ORTHO05D004990 6.5e-57 225.3 216 59.3
Dinv20409 Davidia involucrata HOM05D004368 ORTHO05D004990 6.5e-57 225.3 173 68.2
FAN05G2230 Fragaria x ananassa HOM05D004368 ORTHO05D004990 8.0e-55 218.4 166 71.1
CDE05G2107 Ceratophyllum demersum HOM05D004368 ORTHO05D004990 1.4e-54 217.6 223 57.8
Prupe.3G037600 Prunus persica HOM05D004368 ORTHO05D004990 1.4e-54 217.6 168 69.6
CBR_g39266 Chara braunii HOM05D004368 ORTHO05D004990 3.1e-51 206.5 204 55.4
HPP92_027544 Vanilla planifolia HOM05D004368 ORTHO05D004990 1.2e-50 204.5 168 69.6
Pp3c11_3130 Physcomitrium patens HOM05D004368 ORTHO05D004990 4.5e-50 202.6 184 58.7
SMO141G0180 Selaginella moellendorffii HOM05D004368 ORTHO05D004990 9.4e-48 194.9 186 55.4
Rhsim03G0211800 Rhododendron simsii HOM05D004368 ORTHO05D004990 2.0e-45 187.2 237 46.8
Zm00001eb245590 Zea mays HOM05D004368 ORTHO05D004990 2.8e-39 166.8 156 58.3
Cre10.g460050 Chlamydomonas reinhardtii HOM05D004368 ORTHO05D004990 4.9e-28 129.4 242 36.4
TWI14G0995 Tripterygium wilfordii HOM05D004368 ORTHO05D004990 1.6e-26 124.4 224 37.9
PGSC0003DMG400014712 Solanum tuberosum HOM05D004368 ORTHO05D004990 3.0e-25 120.2 68 83.8
PRCOL_00003238 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 2.9e-20 103.6 230 34.3
MCO11G340 Micromonas commoda HOM05D004368 ORTHO05D004990 6.0e-18 95.9 198 34.8
MCO14G328 Micromonas commoda HOM05D004368 ORTHO05D004990 1.5e-16 91.3 235 31.9
BcaB04g18771 Brassica carinata HOM05D004368 ORTHO05D004990 7.3e-16 89.0 93 61.3
PRCOL_00003077 Prasinoderma coloniale HOM05D004368 ORTHO05D004990 1.8e-14 84.3 201 32.8
SGA_v2.0_scaffold382G50397 Striga asiatica HOM05D004368 ORTHO05D004990 2.7e-10 70.5 42 73.8
TAR624G0904 Trochodendron aralioides HOM05D004368 ORTHO05D004990 2.7e-10 70.5 45 77.8
CBR_g29854 Chara braunii HOM05D004368 ORTHO05D004990 6.6e-09 65.9 51 64.7
TAR624G0589 Trochodendron aralioides HOM05D004368 ORTHO05D004990 5.6e-08 62.8 41 73.2
MCO15G457 Micromonas commoda HOM05D004368 ORTHO05D268172 3.6e-07 60.1 181 29.8
Nitab4.5_0000780g0100 Nicotiana tabacum HOM05D004368 ORTHO05D004990 3.1e-06 57.0 160 32.5


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