Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p35280 Brassica napus HOM05D002144 ORTHO05D002170 8.7e-53 209.9 98 100.0
C05p53460 Brassica napus HOM05D002144 ORTHO05D002170 9.3e-47 189.9 96 89.6
BolC5t34023H Brassica oleracea HOM05D002144 ORTHO05D002170 9.3e-47 189.9 96 89.6
BraA05t22338Z Brassica rapa HOM05D002144 ORTHO05D002170 2.1e-46 188.7 97 87.6
BraA01t03992Z Brassica rapa HOM05D002144 ORTHO05D002170 8.5e-32 140.2 103 68.9
C01p50450 Brassica napus HOM05D002144 ORTHO05D002170 5.5e-31 137.5 91 71.4
BolC1t04997H Brassica oleracea HOM05D002144 ORTHO05D002170 5.5e-31 137.5 91 71.4
Sp3g12440 Schrenkiella parvula HOM05D002144 ORTHO05D002170 3.6e-30 134.8 85 77.6
A01p39510 Brassica napus HOM05D002144 ORTHO05D002170 1.0e-29 133.3 87 74.7
AL3G26430 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 7.0e-26 120.6 85 70.6
CARHR089060 Cardamine hirsuta HOM05D002144 ORTHO05D002170 9.7e-20 100.1 85 60.0
Carub.0003s1379 Capsella rubella HOM05D002144 ORTHO05D002170 2.4e-18 95.5 88 61.4
Aa31LG10G1360 Aethionema arabicum HOM05D000815 ORTHO05D000636 1.7e-16 89.4 116 47.4
CARHR044400 Cardamine hirsuta HOM05D002144 ORTHO05D002170 2.2e-16 89.0 91 54.9
A05p17730 Brassica napus HOM05D002144 ORTHO05D002170 3.8e-16 88.2 82 61.0
BraA05t20665Z Brassica rapa HOM05D002144 ORTHO05D002170 3.8e-16 88.2 82 61.0
C06p15600 Brassica napus HOM05D002144 ORTHO05D002170 1.1e-15 86.7 112 48.2
BcaB02g10863 Brassica carinata HOM05D002144 ORTHO05D002170 2.5e-15 85.5 115 43.5
BolC6t36748H Brassica oleracea HOM05D002144 ORTHO05D002170 4.2e-15 84.7 82 58.5
Thhalv10011865m.g Eutrema salsugineum HOM05D002144 ORTHO05D002170 1.2e-14 83.2 92 52.2
Sp1g40510 Schrenkiella parvula HOM05D001069 ORTHO05D002170 1.2e-14 83.2 93 51.6
BcaB07g33437 Brassica carinata HOM05D002144 ORTHO05D002170 2.7e-14 82.0 94 50.0
AL1G62770 Arabidopsis lyrata HOM05D002144 ORTHO05D002170 4.7e-14 81.3 91 51.6
BcaC08g44159 Brassica carinata HOM05D002144 ORTHO05D002170 6.1e-14 80.9 82 57.3
Carub.0001s4330 Capsella rubella HOM05D002144 ORTHO05D002170 3.0e-13 78.6 126 42.1
Gohir.D05G140350 Gossypium hirsutum HOM05D002144 ORTHO05D002170 3.4e-12 75.1 73 52.1
Gorai.009G144700 Gossypium raimondii HOM05D002144 ORTHO05D002170 3.7e-11 71.6 91 47.3
Gohir.A05G138200 Gossypium hirsutum HOM05D002144 ORTHO05D002170 6.3e-11 70.9 91 47.3
THA.LOC104822669 Tarenaya hassleriana HOM05D002144 ORTHO05D002170 8.3e-11 70.5 105 41.0
AT1G54070 Arabidopsis thaliana HOM05D002144 ORTHO05D002170 1.8e-10 69.3 91 48.4
Cpa.g.sc25.165 Carica papaya HOM05D002144 ORTHO05D002170 4.1e-10 68.2 90 46.7
GSVIVG01016701001 Vitis vinifera HOM05D002144 ORTHO05D002170 5.4e-10 67.8 95 43.2
MBI19_g38000_MAGBIO Magnolia biondii HOM05D002144 ORTHO05D002170 9.1e-10 67.0 85 42.4
Duzib235G0612 Durio zibethinus HOM05D002144 ORTHO05D002170 1.2e-09 66.6 85 47.1
Dinv37840 Davidia involucrata HOM05D002144 ORTHO05D002170 3.5e-09 65.1 87 43.7
Aa31LG8G1430 Aethionema arabicum HOM05D002144 ORTHO05D002170 1.3e-08 63.2 71 50.7
Haze_16090 Corylus avellana HOM05D002144 ORTHO05D002170 1.7e-08 62.8 82 43.9
TWI23G1155 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 2.2e-08 62.4 97 40.2
TWI14G1240 Tripterygium wilfordii HOM05D002144 ORTHO05D002170 8.5e-08 60.5 81 46.9
COL.COLO4_30825 Corchorus olitorius HOM05D002144 ORTHO05D002170 1.5e-07 59.7 78 47.4
Dinv20398 Davidia involucrata HOM05D002144 ORTHO05D002170 2.5e-07 58.9 95 41.1
unitig_748.g8062 Utricularia gibba HOM05D002144 ORTHO05D002170 3.2e-07 58.5 82 45.1
Manes.11G015300 Manihot esculenta HOM05D002144 ORTHO05D002170 4.2e-07 58.2 76 44.7
Thecc.06G126600 Theobroma cacao HOM05D002144 ORTHO05D002170 5.5e-07 57.8 79 44.3
FvH4_6g35330 Fragaria vesca HOM05D002144 ORTHO05D002170 7.2e-07 57.4 89 40.4
FAN09G1588 Fragaria x ananassa HOM05D002144 ORTHO05D002170 7.2e-07 57.4 89 40.4
FAN14G0119 Fragaria x ananassa HOM05D002144 ORTHO05D002170 7.2e-07 57.4 89 40.4
Oeu008518.1 Olea europaea HOM05D002144 ORTHO05D002170 9.4e-07 57.0 80 41.2
PSO223G0021 Papaver somniferum HOM05D002144 ORTHO05D002170 9.4e-07 57.0 88 42.0
PGR031G3340 Punica granatum HOM05D002144 ORTHO05D002170 9.4e-07 57.0 99 37.4
Manes.04G148800 Manihot esculenta HOM05D002144 ORTHO05D002170 1.6e-06 56.2 76 43.4
Potri.001G164800 Populus trichocarpa HOM05D002144 ORTHO05D002170 1.6e-06 56.2 79 45.6
Duzib192G0893 Durio zibethinus HOM05D002144 ORTHO05D002170 2.1e-06 55.8 78 43.6
Oeu059028.1 Olea europaea HOM05D002144 ORTHO05D002170 2.1e-06 55.8 76 44.7
CiPaw.01G214500 Carya illinoinensis HOM05D002144 ORTHO05D002170 4.7e-06 54.7 71 45.1
Sabra01G0128200 Salix brachista HOM05D002144 ORTHO05D002170 4.7e-06 54.7 81 39.5
MSTRG.10926 Avicennia marina HOM05D002144 ORTHO05D002170 8.0e-06 53.9 60 48.3
CsaV3_7G034150 Cucumis sativus L. HOM05D002144 ORTHO05D002170 8.0e-06 53.9 82 45.1
PSO386G0143 Papaver somniferum HOM05D002144 ORTHO05D002170 8.0e-06 53.9 88 39.8
Sc15g0000660 Simmondsia chinensis HOM05D002144 ORTHO05D002170 8.0e-06 53.9 25 92.0


User provided reference genes

Program Settings