Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 7.0e-159 563.9 289 100.0
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 1.0e-157 560.1 288 99.0
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 1.0e-157 560.1 288 99.0
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 1.0e-157 560.1 288 99.0
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 3.8e-157 558.1 289 99.0
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 2.1e-155 552.4 289 98.3
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 3.6e-155 551.6 289 97.2
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 6.1e-155 550.8 289 97.2
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.0e-154 550.1 289 96.9
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.8e-154 549.3 288 97.2
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.0e-154 548.5 289 96.5
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 8.9e-154 547.0 288 96.2
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.3e-152 543.1 288 95.8
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 3.7e-152 541.6 288 95.5
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.0e-149 531.9 288 94.1
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 7.3e-148 527.3 282 95.4
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 7.3e-148 527.3 282 95.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 9.5e-148 526.9 288 93.4
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 9.5e-148 526.9 282 95.4
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.3e-141 505.8 290 88.6
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.6e-131 471.9 291 83.5
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 1.7e-128 463.0 290 81.4
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 1.3e-125 453.4 289 80.6
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.3e-125 452.6 289 79.9
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.3e-125 452.6 289 79.9
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 1.5e-124 449.9 295 76.9
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 3.3e-124 448.7 289 78.9
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.3e-124 448.4 293 77.5
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.1e-123 446.0 289 79.2
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.1e-122 443.7 289 78.5
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 1.4e-122 443.4 289 78.5
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.1e-122 442.2 289 78.2
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 3.4e-121 438.7 295 75.9
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 4.4e-121 438.3 292 77.4
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 4.4e-121 438.3 281 77.9
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.4e-121 438.3 289 77.2
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 7.6e-121 437.6 290 77.9
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 7.6e-121 437.6 289 76.8
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 9.9e-121 437.2 291 75.3
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 1.7e-120 436.4 292 77.1
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 2.2e-120 436.0 290 77.6
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 2.9e-120 435.6 292 76.7
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 8.4e-120 434.1 294 75.5
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 2.4e-119 432.6 292 76.7
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 3.2e-119 432.2 292 77.1
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 3.2e-119 432.2 294 75.2
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 4.2e-119 431.8 292 76.4
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 7.1e-119 431.0 290 76.6
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 9.3e-119 430.6 294 74.5
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 9.3e-119 430.6 290 75.5
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 1.2e-118 430.3 297 74.7
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 1.2e-118 430.3 294 74.5
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.6e-118 429.9 291 76.6
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.7e-118 429.1 290 75.2
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 3.5e-118 428.7 291 76.6
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 3.5e-118 428.7 290 75.2
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 1.3e-117 426.8 295 75.3
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 3.9e-117 425.2 295 74.9
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 5.1e-117 424.9 288 74.3
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 1.9e-116 422.9 292 76.0
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 1.9e-116 422.9 297 74.1
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 4.3e-116 421.8 288 75.0
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.6e-116 420.6 288 75.0
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.3e-115 420.2 288 75.0
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 1.3e-115 420.2 293 73.7
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 2.1e-115 419.5 290 73.1
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 2.8e-115 419.1 288 74.7
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.8e-115 418.3 289 75.4
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 6.2e-115 417.9 288 72.9
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 8.1e-115 417.5 292 73.6
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-114 417.2 291 73.5
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 1.1e-114 417.2 291 73.5
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 1.4e-114 416.8 292 74.0
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.8e-114 416.4 292 73.6
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 2.4e-114 416.0 288 74.3
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 4.0e-114 415.2 294 73.8
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.0e-114 415.2 288 74.3
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 6.9e-114 414.5 291 72.5
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 6.9e-114 414.5 291 73.5
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 9.0e-114 414.1 291 73.9
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 1.2e-113 413.7 292 74.3
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 2.6e-113 412.5 291 72.5
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 3.4e-113 412.1 294 72.1
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 5.8e-113 411.4 294 74.8
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 4.9e-112 408.3 280 75.7
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 4.9e-112 408.3 288 72.6
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 4.9e-112 408.3 289 72.7
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.1e-111 407.1 291 73.2
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 2.4e-111 406.0 291 73.2
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.2e-111 405.2 291 71.8
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 5.4e-111 404.8 295 72.5
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 5.4e-111 404.8 288 72.6
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 7.1e-111 404.4 281 72.6
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 9.3e-111 404.1 292 72.9
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 2.1e-110 402.9 289 73.0
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.7e-110 402.5 285 73.3
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 4.6e-110 401.7 296 72.6
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 1.0e-109 400.6 293 71.0
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 1.0e-109 400.6 289 72.0
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.8e-109 399.8 292 70.9
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.8e-109 399.8 291 72.2
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 5.1e-109 398.3 289 69.9
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 5.1e-109 398.3 289 69.9
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 6.7e-109 397.9 293 70.3
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 1.9e-108 396.4 289 69.6
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 7.4e-108 394.4 289 70.6
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 9.6e-108 394.0 292 71.2
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.3e-107 393.7 292 69.2
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 4.8e-107 391.7 291 69.4
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 1.1e-106 390.6 296 70.9
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.4e-106 390.2 292 69.5
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.8e-106 389.8 285 71.2
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.4e-106 389.4 292 71.2
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 4.0e-106 388.7 295 71.5
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.3e-106 388.3 294 71.4
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 9.0e-106 387.5 278 73.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.5e-105 386.7 292 69.9
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.6e-105 386.0 295 68.5
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 5.8e-105 384.8 293 70.0
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 1.3e-104 383.6 296 69.3
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 1.7e-104 383.3 291 71.1
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 2.2e-104 382.9 282 70.6
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.9e-104 381.7 289 69.6
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 6.0e-102 374.8 295 66.1
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 2.3e-101 372.9 286 70.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 5.6e-100 368.2 268 70.5
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 2.1e-99 366.3 286 65.7
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 2.4e-98 362.8 291 63.9
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 5.8e-97 358.2 292 66.8
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 1.7e-96 356.7 303 63.0
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 3.8e-96 355.5 294 63.6
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 4.2e-95 352.1 260 69.2
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 7.9e-94 347.8 295 64.4
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.8e-93 346.7 295 63.1
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 6.7e-93 344.7 291 65.6
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 3.3e-92 342.4 300 61.7
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 4.3e-92 342.0 302 62.6
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 9.7e-92 340.9 295 63.1
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 2.2e-91 339.7 302 61.6
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 4.8e-91 338.6 293 63.5
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 3.1e-90 335.9 293 62.8
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 6.5e-88 328.2 295 60.3
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 1.6e-86 323.6 291 59.5
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 5.1e-85 318.5 278 60.1
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 8.8e-85 317.8 247 68.0
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 2.5e-84 316.2 214 79.0
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 6.3e-75 285.0 277 56.7
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 5.9e-73 278.5 277 54.5
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 8.8e-69 264.6 194 73.2
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 3.3e-68 262.7 265 56.6
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 9.7e-60 234.6 143 79.7
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 2.8e-59 233.0 282 46.5
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 7.2e-55 218.4 278 48.9
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 1.7e-48 197.2 166 66.3
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 1.1e-47 194.5 147 66.7
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 1.9e-47 193.7 126 72.2
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 1.8e-42 177.2 145 68.3
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 2.0e-28 130.6 114 62.3
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 2.9e-27 126.7 100 67.0
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 7.1e-26 122.1 112 60.7
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 2.1e-25 120.6 285 31.2
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 4.3e-23 112.8 99 63.6
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 2.1e-22 110.5 72 77.8
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 1.7e-16 90.9 71 60.6
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 1.1e-10 71.6 55 63.6
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 4.2e-10 69.7 89 52.8
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 1.5e-07 61.2 164 31.7
MD16G1097300 Malus domestica HOM05D005748 ORTHO05D007123 2.5e-07 60.5 163 29.4
Ciclev10032509m.g Citrus clementina HOM05D005748 ORTHO05D007123 4.8e-06 56.2 166 31.3
PGR119G1070 Punica granatum HOM05D005748 ORTHO05D007123 6.2e-06 55.8 141 33.3


User provided reference genes

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