Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p33670 Brassica napus HOM05D000209 ORTHO05D000129 1.8e-40 168.7 81 100.0
A05p33700 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-39 165.6 81 97.5
C05p50700 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-38 161.8 80 96.2
BcaB06g25681 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-37 159.1 79 94.9
BcaC05g28942 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-37 158.3 80 93.8
BolC5t33817H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-37 158.3 80 93.8
Sp3g14050 Schrenkiella parvula HOM05D000209 ORTHO05D000129 4.5e-31 137.5 79 79.7
Thhalv10020932m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.3e-29 130.2 79 77.2
AL2G18120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-22 109.0 79 68.4
AL3G28670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.7e-20 100.9 79 67.1
C05p50670 Brassica napus HOM05D000209 ORTHO05D000129 5.2e-19 97.4 79 63.3
A05p33650 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-18 95.9 79 62.0
BolC5t33815H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-18 95.9 79 62.0
BraA05t22190Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-18 95.9 79 62.0
AL5G27570 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.6e-18 95.1 79 59.5
BcaB06g25682 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-15 86.3 71 64.8
BcaC05g28939 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-15 85.5 71 62.0
CARHR090170 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.3e-14 82.8 80 57.5
AL3G30730 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-13 79.0 80 53.8
AT3G17620 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.9e-13 79.0 80 55.0
AT3G17320 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.2e-12 76.3 67 59.7
CARHR092000 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.1e-12 75.5 84 53.6
CARHR213520 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.6e-12 74.7 69 56.5
CARHR214390 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.1e-12 73.6 81 50.6
CARHR092940 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.4e-11 72.8 88 47.7
AL3G29740 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.8e-11 70.5 82 51.2
AL3G30470 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.8e-11 70.5 85 51.8
Carub.0003s2043 Capsella rubella HOM05D000209 ORTHO05D000129 8.9e-11 70.1 83 50.6
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-10 69.3 80 51.2
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-10 68.2 69 50.7
CARHR092630 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.4e-10 67.8 68 54.4
A01p38090 Brassica napus HOM05D000209 ORTHO05D000129 5.8e-10 67.4 80 48.8
BraA01t03792Z Brassica rapa HOM05D000209 ORTHO05D000129 5.8e-10 67.4 80 48.8
AL3G40140 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-09 65.9 80 48.8
CARHR107830 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.7e-09 65.9 80 50.0
AT5G36730 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.2e-09 65.5 80 50.0
AT5G36820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.2e-09 65.5 80 50.0
AL3G53160 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-09 65.1 83 50.6
AL3G29670 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.9e-09 64.3 80 46.2
BcaC09g48583 Brassica carinata HOM05D000209 ORTHO05D000129 4.9e-09 64.3 80 47.5
C01p48270 Brassica napus HOM05D000209 ORTHO05D000129 1.1e-08 63.2 80 46.2
AL1G53830 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.9e-08 62.4 82 47.6
BolC1t04790H Brassica oleracea HOM05D000209 ORTHO05D000129 2.4e-08 62.0 80 45.0
Carub.0003s1660 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-08 62.0 80 45.0
Carub.0003s1703 Capsella rubella HOM05D000209 ORTHO05D000129 2.4e-08 62.0 66 53.0
CARHR092560 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.2e-08 61.6 60 55.0
Thhalv10027355m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.2e-08 61.6 82 48.8
AT3G16880 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-08 61.2 67 53.7
BcaC06g35831 Brassica carinata HOM05D000209 ORTHO05D014439 4.1e-08 61.2 67 47.8
AT3G16740 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.4e-08 60.8 80 46.2
BcaC05g28838 Brassica carinata HOM05D000209 ORTHO05D000129 5.4e-08 60.8 83 43.4
C05p49440 Brassica napus HOM05D000209 ORTHO05D018806 5.4e-08 60.8 83 43.4
AL3G30480 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 7.1e-08 60.5 74 48.6
BcaC01g03771 Brassica carinata HOM05D000209 ORTHO05D000129 7.1e-08 60.5 80 45.0
BcaC01g03778 Brassica carinata HOM05D000209 ORTHO05D000129 7.1e-08 60.5 80 45.0
C05p49540 Brassica napus HOM05D000389 ORTHO05D000287 7.1e-08 60.5 90 42.2
BolC5t33690H Brassica oleracea HOM05D000209 ORTHO05D000129 7.1e-08 60.5 83 43.4
BolC5t33707H Brassica oleracea HOM05D000209 ORTHO05D000129 7.1e-08 60.5 90 42.2
BcaC05g28848 Brassica carinata HOM05D000209 ORTHO05D000129 9.2e-08 60.1 90 43.3
BolC3t17150H Brassica oleracea HOM05D000209 ORTHO05D000129 9.2e-08 60.1 80 45.0
CARHR092080 Cardamine hirsuta HOM05D000209 ORTHO05D014056 9.2e-08 60.1 67 47.8
BcaB06g25776 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-07 59.7 79 45.6
BcaB04g18933 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-07 59.3 67 50.7
CARHR107470 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-07 59.3 74 48.6
BcaC05g28936 Brassica carinata HOM05D011362 ORTHO05D000129 2.1e-07 58.9 58 51.7
BolC5t33813H Brassica oleracea HOM05D000209 ORTHO05D000129 2.1e-07 58.9 53 54.7
Thhalv10001171m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 3.5e-07 58.2 78 47.4
Thhalv10022067m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 4.6e-07 57.8 78 47.4
CARHR135370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.0e-07 57.4 79 41.8
AT2G17830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.0e-06 56.6 67 49.3
BolC6t38417H Brassica oleracea HOM05D000209 ORTHO05D000129 1.0e-06 56.6 79 43.0
AL3G40130 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-06 55.8 74 45.9
AL4G21820 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-06 55.8 80 45.0
AT5G36200 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.3e-06 55.5 76 48.7
AT3G16820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.9e-06 54.7 66 45.5
BcaNung00144 Brassica carinata HOM05D000209 ORTHO05D000129 3.9e-06 54.7 72 40.3
C06p32980 Brassica napus HOM05D000209 ORTHO05D000129 3.9e-06 54.7 78 42.3
Carub.0002s0645 Capsella rubella HOM05D000209 ORTHO05D000129 3.9e-06 54.7 59 47.5
CARHR094260 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.9e-06 54.7 80 43.8
AL3G34120 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.1e-06 54.3 75 44.0
AT3G19560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.6e-06 53.9 69 43.5
BcaB02g06977 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-06 53.9 79 41.8
BcaB02g06982 Brassica carinata HOM05D000209 ORTHO05D000129 6.6e-06 53.9 79 41.8
C09p33240 Brassica napus HOM05D000209 ORTHO05D018806 6.6e-06 53.9 86 41.9
BolC9t56161H Brassica oleracea HOM05D022249 ORTHO05D018806 6.6e-06 53.9 86 41.9
CARHR127660 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.6e-06 53.9 68 44.1
AL3G29780 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.6e-06 53.5 66 50.0
AT3G24580 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 8.6e-06 53.5 73 45.2
CARHR108730 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.6e-06 53.5 80 42.5
CARHR192030 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.6e-06 53.5 69 50.7


User provided reference genes

Program Settings