Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 6.2e-282 973.4 467 100.0
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 2.0e-280 968.4 467 99.1
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.0e-276 956.1 467 98.9
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 6.4e-271 936.8 462 97.8
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 5.1e-260 900.6 456 93.0
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 2.5e-259 898.3 461 92.8
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 4.8e-258 894.0 467 91.4
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 1.8e-257 892.1 467 91.2
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 5.8e-256 887.1 467 90.8
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 1.0e-255 886.3 456 91.4
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 2.9e-255 884.8 467 91.0
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 8.4e-255 883.2 461 90.0
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 1.1e-254 882.9 467 90.6
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 1.4e-254 882.5 461 89.8
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 3.0e-252 874.8 461 89.6
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 9.4e-238 826.6 465 84.9
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 2.0e-235 818.9 445 85.4
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 6.7e-228 793.9 445 84.0
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 3.5e-216 755.0 438 79.9
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 5.4e-209 731.1 457 76.4
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 3.5e-208 728.4 460 76.1
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 3.5e-208 728.4 464 75.4
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.5e-208 728.4 471 74.1
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 7.7e-208 727.2 471 74.1
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 3.8e-207 724.9 455 76.9
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.2e-205 719.9 462 74.2
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 2.1e-205 719.2 448 76.1
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 1.4e-204 716.5 448 75.9
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 1.4e-204 716.5 447 77.0
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 6.8e-204 714.1 446 76.2
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 1.8e-201 706.1 452 75.9
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 2.4e-201 705.7 446 75.3
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 1.6e-200 703.0 454 74.2
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 1.7e-199 699.5 449 75.1
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.7e-199 699.5 467 73.4
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 2.3e-199 699.1 436 75.2
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 1.9e-198 696.0 449 75.7
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 2.5e-198 695.7 448 73.9
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 2.5e-198 695.7 438 75.3
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 4.3e-198 694.9 438 75.3
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 4.3e-198 694.9 449 74.8
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.3e-198 694.9 437 75.5
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 5.6e-198 694.5 440 75.2
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.3e-198 694.1 442 75.3
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 9.5e-198 693.7 465 73.3
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 1.6e-197 693.0 450 73.8
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 2.1e-197 692.6 469 73.8
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 3.6e-197 691.8 448 73.4
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 3.6e-197 691.8 459 72.3
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 4.7e-197 691.4 458 75.1
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 1.0e-196 690.3 440 75.5
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 2.3e-196 689.1 467 73.4
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 5.2e-196 688.0 448 74.3
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 6.8e-196 687.6 437 74.1
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 8.9e-196 687.2 440 74.3
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.2e-195 686.8 438 74.7
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 1.5e-195 686.4 441 74.6
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 1.5e-195 686.4 451 74.3
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 7.5e-195 684.1 445 73.7
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 1.3e-194 683.3 439 74.9
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 1.7e-194 682.9 440 73.6
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.7e-194 682.9 445 73.3
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.7e-194 682.9 434 75.6
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 4.9e-194 681.4 469 71.4
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 6.4e-194 681.0 449 73.9
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 6.4e-194 681.0 436 75.5
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 8.3e-194 680.6 442 73.8
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.4e-193 679.9 444 71.8
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 1.4e-193 679.9 449 72.6
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 1.4e-193 679.9 437 73.2
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 1.4e-193 679.9 397 79.6
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 1.9e-193 679.5 471 72.4
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 9.2e-193 677.2 433 73.0
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 1.6e-192 676.4 444 73.0
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 2.0e-192 676.0 440 72.3
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.0e-192 676.0 435 72.9
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 3.5e-192 675.2 435 73.8
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 4.6e-192 674.9 435 72.6
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.0e-191 673.7 442 74.2
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 1.7e-191 672.9 439 74.9
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 1.7e-191 672.9 437 72.5
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.3e-191 672.5 435 72.4
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 3.9e-191 671.8 444 72.3
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 5.0e-191 671.4 464 69.2
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 5.0e-191 671.4 442 73.3
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 1.5e-190 669.8 447 72.3
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.5e-190 669.1 433 74.1
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 3.3e-190 668.7 465 71.0
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 5.6e-190 667.9 477 69.2
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 9.5e-190 667.2 365 82.7
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 9.5e-190 667.2 365 83.0
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 3.6e-189 665.2 441 72.6
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 6.2e-189 664.5 442 71.7
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 8.0e-189 664.1 400 77.2
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 2.3e-188 662.5 407 76.4
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 3.1e-188 662.1 439 72.4
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 3.1e-188 662.1 443 72.0
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 5.2e-188 661.4 460 70.0
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 9.8e-187 657.1 444 72.3
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 4.1e-185 651.7 435 70.6
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 1.1e-182 643.7 430 72.6
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 4.3e-182 641.7 444 70.5
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 2.1e-181 639.4 385 76.9
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.1e-180 637.1 434 71.7
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 3.1e-180 635.6 433 72.7
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 1.5e-179 633.3 430 72.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 1.5e-179 633.3 515 61.9
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 2.6e-179 632.5 456 67.8
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 8.3e-178 627.5 452 66.8
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 1.6e-176 623.2 380 76.3
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 3.5e-176 622.1 445 68.1
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.3e-175 620.2 435 68.7
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 3.1e-172 609.0 443 66.4
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 1.2e-171 607.1 446 66.1
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 7.1e-169 597.8 427 69.1
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 3.5e-168 595.5 383 72.3
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 2.3e-167 592.8 323 83.6
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 6.4e-162 574.7 323 81.1
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 1.9e-161 573.2 348 76.4
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 1.6e-157 560.1 428 65.0
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 5.3e-156 555.1 380 66.6
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 4.9e-154 548.5 409 65.3
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.3e-151 540.4 290 84.8
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 8.7e-151 537.7 290 84.5
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 4.8e-149 531.9 290 82.4
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 2.5e-145 519.6 335 69.3
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 2.1e-141 506.5 287 78.7
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 2.8e-141 506.1 343 70.8
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 2.4e-140 503.1 271 85.2
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.6e-139 498.0 397 65.2
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.5e-130 468.4 310 72.9
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 2.2e-125 453.4 305 72.5
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 1.7e-122 443.7 299 72.2
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.4e-121 440.7 389 51.9
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 7.0e-116 421.8 286 65.7
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.2e-107 394.4 385 49.6
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 7.5e-94 348.6 319 52.7
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 7.0e-92 342.0 274 63.5
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.3e-90 337.8 333 49.2
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 1.6e-64 251.1 180 66.7
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 6.8e-63 245.7 137 82.5
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 2.2e-53 214.2 110 86.4
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 1.6e-48 198.0 123 73.2
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 2.1e-48 197.6 119 73.1
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 5.3e-47 193.0 138 61.6
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 4.2e-44 183.3 128 67.2
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 3.3e-33 147.1 85 78.8
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 9.6e-33 145.6 85 77.6
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 1.8e-26 124.8 81 70.4
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 5.3e-23 113.2 101 56.4
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.2e-13 81.3 52 71.2
BcaB01g02088 Brassica carinata HOM05D004680 ORTHO05D039099 5.7e-09 66.6 30 93.3
QL11p016407 Quercus lobata HOM05D004680 ORTHO05D039099 6.9e-07 59.7 132 35.6
SHI25903 Sapria himalayana HOM05D004680 ORTHO05D365905 2.0e-06 58.2 123 37.4
HanXRQChr10g0311001 Helianthus annuus HOM05D004680 ORTHO05D005939 3.4e-06 57.4 112 37.5


User provided reference genes

Program Settings