Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 3.7e-100 368.2 188 100.0
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 1.2e-98 363.2 188 98.4
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 3.3e-93 345.1 187 93.6
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 4.2e-88 328.2 178 93.3
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 4.7e-87 324.7 178 93.8
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 1.5e-77 293.1 187 82.4
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 1.2e-58 230.3 186 62.4
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.2e-53 213.8 187 58.3
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 3.2e-51 205.7 187 57.8
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 7.0e-51 204.5 186 58.6
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.3e-44 183.7 188 51.6
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.4e-43 180.3 190 52.1
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 7.0e-43 177.9 187 49.7
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 7.0e-43 177.9 171 52.0
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 2.3e-41 172.9 186 50.5
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 3.9e-41 172.2 187 49.7
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 1.5e-40 170.2 187 46.5
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 1.5e-40 170.2 187 46.5
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 2.5e-40 169.5 187 48.1
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 7.3e-40 167.9 187 46.5
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 7.3e-40 167.9 188 46.8
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 9.5e-40 167.5 187 46.5
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 1.2e-39 167.2 187 46.5
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 1.6e-39 166.8 187 47.1
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 1.4e-38 163.7 187 47.1
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 2.9e-36 156.0 186 48.4
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 2.9e-36 156.0 184 46.2
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 1.4e-30 137.1 187 46.0
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 3.1e-30 136.0 187 42.2
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 4.0e-30 135.6 187 40.6
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 8.9e-30 134.4 190 45.8
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 1.2e-29 134.0 187 44.9
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 4.4e-29 132.1 187 44.4
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 2.2e-28 129.8 187 44.4
BolC1t05672H Brassica oleracea HOM05D008745 ORTHO05D010941 5.8e-21 105.1 191 34.6
Sp3g04630 Schrenkiella parvula HOM05D008745 ORTHO05D010941 4.2e-19 99.0 188 32.4
BraA01t04492Z Brassica rapa HOM05D008745 ORTHO05D010941 9.3e-19 97.8 179 34.6
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.3e-16 89.4 116 39.7
AL3G16450 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 9.6e-16 87.8 179 34.1
BcaC09g47846 Brassica carinata HOM05D008745 ORTHO05D010941 6.2e-15 85.1 179 34.1
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 8.1e-15 84.7 147 33.3
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.4e-11 73.9 97 42.3
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.6e-10 70.5 159 30.8
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 2.7e-10 69.7 152 33.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 4.6e-10 68.9 165 32.1
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 6.7e-09 65.1 167 31.7
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 2.8e-07 59.7 144 29.2
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 2.8e-07 59.7 130 30.8
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 8.1e-07 58.2 173 30.1
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.8e-06 57.0 151 27.2
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.8e-06 57.0 96 32.3
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 4.0e-06 55.8 172 27.3
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 4.0e-06 55.8 162 30.9
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.3e-06 55.5 117 32.5
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.3e-06 55.5 117 32.5
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 9.0e-06 54.7 99 34.3
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 9.0e-06 54.7 144 27.1


User provided reference genes

Program Settings