Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 1.2e-52 209.5 104 100.0
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-46 188.0 95 98.9
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 6.4e-46 187.2 95 98.9
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-35 151.4 95 84.2
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 3.4e-31 138.3 103 74.8
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 2.9e-30 135.2 101 74.3
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 2.9e-30 135.2 96 76.0
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 3.8e-30 134.8 93 78.5
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.1e-29 133.3 93 77.4
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-29 132.5 93 77.4
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-29 132.1 93 77.4
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 7.1e-29 130.6 93 76.3
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 7.1e-29 130.6 93 76.3
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 9.3e-29 130.2 93 76.3
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 9.3e-29 130.2 93 76.3
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 9.3e-29 130.2 93 76.3
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 9.3e-29 130.2 93 76.3
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-28 129.4 93 75.3
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-28 129.4 93 75.3
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 1.9e-26 122.5 93 75.3
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 7.6e-23 110.5 81 72.8
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 6.5e-22 107.5 93 64.5
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 3.2e-21 105.1 92 66.3
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 3.2e-21 105.1 92 66.3
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-20 103.2 92 66.3
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-20 103.2 92 66.3
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-20 103.2 92 66.3
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-20 103.2 92 66.3
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-20 103.2 92 66.3
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 2.7e-20 102.1 73 78.1
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 2.7e-20 102.1 92 65.2
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 3.5e-20 101.7 94 63.8
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 3.5e-20 101.7 80 70.0
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 4.6e-20 101.3 97 58.8
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 6.1e-20 100.9 92 65.2
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 6.1e-20 100.9 92 65.2
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 7.9e-20 100.5 99 56.6
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 65.2
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 64.1
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 64.1
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 64.1
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 64.1
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 7.9e-20 100.5 92 64.1
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-19 100.1 92 65.2
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-19 100.1 91 64.8
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-19 100.1 92 64.1
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-19 100.1 73 76.7
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-19 100.1 92 65.2
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-19 100.1 92 64.1
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-19 100.1 91 64.8
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 1.0e-19 100.1 92 64.1
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-19 99.8 92 64.1
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 1.3e-19 99.8 91 64.8
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-19 99.4 92 63.0
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-19 99.4 92 63.0
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-19 99.4 91 64.8
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-19 99.4 88 64.8
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 1.8e-19 99.4 91 64.8
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-19 99.0 92 64.1
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-19 99.0 92 64.1
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 3.0e-19 98.6 92 64.1
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 3.0e-19 98.6 92 64.1
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 3.0e-19 98.6 92 64.1
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 3.9e-19 98.2 92 63.0
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 5.1e-19 97.8 92 64.1
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 5.1e-19 97.8 90 64.4
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-19 97.4 92 63.0
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 6.7e-19 97.4 92 63.0
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 6.7e-19 97.4 92 62.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-18 96.3 97 56.7
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 1.9e-18 95.9 93 59.1
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-18 95.9 92 63.0
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-18 95.1 95 56.8
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-18 95.1 92 63.0
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 4.3e-18 94.7 93 60.2
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 4.3e-18 94.7 93 59.1
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 7.4e-18 94.0 93 59.1
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 7.4e-18 94.0 85 63.5
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-18 93.6 99 53.5
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-18 93.6 105 50.5
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 9.7e-18 93.6 93 59.1
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 9.7e-18 93.6 93 58.1
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-17 93.2 89 57.3
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-17 92.8 89 57.3
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 2.8e-17 92.0 88 56.8
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 2.8e-17 92.0 93 57.0
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 2.8e-17 92.0 93 55.9
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 2.8e-17 92.0 89 56.2
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-17 91.7 85 62.4
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 3.7e-17 91.7 85 62.4
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 8.2e-17 90.5 100 53.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-16 89.7 102 52.9
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 1.8e-16 89.4 96 60.4
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 9.0e-16 87.0 88 55.7
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 2.0e-15 85.9 84 59.5
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 2.0e-15 85.9 85 55.3
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 2.6e-15 85.5 85 58.8
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 2.6e-15 85.5 91 51.6
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 2.6e-15 85.5 86 55.8
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 4.5e-15 84.7 99 50.5
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 4.5e-15 84.7 84 58.3
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 4.5e-15 84.7 85 54.1
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 4.5e-15 84.7 85 54.1
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 7.7e-15 84.0 85 54.1
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-14 83.2 84 57.1
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 1.3e-14 83.2 85 52.9
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 1.3e-14 83.2 85 52.9
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 1.3e-14 83.2 85 52.9
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 1.3e-14 83.2 78 61.5
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-14 82.8 81 58.0
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-14 82.8 92 51.1
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 1.7e-14 82.8 80 58.8
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 1.7e-14 82.8 80 61.2
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 1.7e-14 82.8 71 66.2
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 2.2e-14 82.4 84 57.1
BraA05t21653Z Brassica rapa HOM05D003591 ORTHO05D107715 2.2e-14 82.4 56 76.8
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 2.9e-14 82.0 85 52.9
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 2.9e-14 82.0 85 51.8
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 5.0e-14 81.3 78 60.3
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 5.0e-14 81.3 78 60.3
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 6.5e-14 80.9 85 54.1
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 1.9e-13 79.3 95 49.5
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 2.5e-13 79.0 83 55.4
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 2.5e-13 79.0 75 62.7
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-12 76.6 92 47.8
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-12 76.6 92 45.7
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 4.6e-12 74.7 80 52.5
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 6.1e-12 74.3 99 48.5
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 1.4e-11 73.2 88 46.6
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-11 72.8 66 62.1
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 1.8e-11 72.8 54 74.1
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 2.3e-11 72.4 95 45.3
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 2.3e-11 72.4 75 57.3
BraA05t21545Z Brassica rapa HOM05D003591 ORTHO05D107559 2.3e-11 72.4 37 89.2
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 6.7e-11 70.9 80 53.8
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 9.7e-10 67.0 41 87.8
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.7e-09 66.2 77 51.9
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 2.2e-09 65.9 33 100.0
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 2.2e-09 65.9 33 100.0
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 3.7e-09 65.1 99 44.4
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 6.3e-09 64.3 95 42.1
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 1.1e-08 63.5 40 80.0
BolC7t43136H Brassica oleracea HOM05D003591 ORTHO05D042843 1.1e-08 63.5 40 80.0
BolC8t50331H Brassica oleracea HOM05D003591 ORTHO05D005681 1.1e-08 63.5 40 80.0
C04p51490 Brassica napus HOM05D003591 ORTHO05D042843 1.4e-08 63.2 40 80.0
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 2.4e-08 62.4 41 70.7
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 2.4e-08 62.4 40 77.5
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 5.3e-08 61.2 40 77.5
BcaB07g32445 Brassica carinata HOM05D003591 ORTHO05D023905 9.1e-08 60.5 40 75.0
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 1.2e-07 60.1 78 48.7
A05p23640 Brassica napus HOM05D003591 ORTHO05D005681 1.5e-07 59.7 40 75.0
BraA05t21231Z Brassica rapa HOM05D003591 ORTHO05D005681 1.5e-07 59.7 40 75.0
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 2.0e-07 59.3 65 56.9
BcaB01g01390 Brassica carinata HOM05D001499 ORTHO05D001560 3.4e-07 58.5 42 66.7
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 5.9e-07 57.8 71 49.3
BraA08t33466Z Brassica rapa HOM05D012384 ORTHO05D014535 7.7e-07 57.4 34 85.3
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 2.9e-06 55.5 39 74.4
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.9e-06 55.5 39 74.4


User provided reference genes

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