Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 2.2e-134 482.3 242 100.0
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 1.7e-118 429.5 256 87.9
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 5.2e-115 417.9 257 85.6
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 1.3e-113 413.3 258 85.3
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 1.3e-113 413.3 258 85.3
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 2.4e-112 409.1 258 84.5
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.2e-103 380.2 250 80.8
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 2.1e-103 379.4 252 80.6
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 6.6e-102 374.4 257 76.7
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 4.3e-101 371.7 257 77.8
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 6.8e-99 364.4 256 77.0
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 4.6e-95 351.7 242 78.1
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 4.0e-91 338.6 264 70.1
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 4.4e-90 335.1 258 69.0
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.5e-85 320.1 234 70.5
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 7.3e-85 317.8 259 67.6
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 1.6e-84 316.6 259 66.8
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 2.1e-84 316.2 241 68.0
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 2.8e-84 315.8 261 65.9
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 6.2e-84 314.7 260 65.8
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 1.8e-83 313.2 260 65.4
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 2.4e-83 312.8 248 66.1
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 3.1e-83 312.4 256 66.4
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 5.3e-83 311.6 259 65.6
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 6.9e-83 311.2 259 64.5
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 6.9e-83 311.2 259 65.3
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 6.9e-83 311.2 259 65.3
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 1.5e-82 310.1 259 64.5
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 1.5e-82 310.1 247 66.4
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 2.0e-82 309.7 260 64.2
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 2.0e-82 309.7 258 64.7
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 7.6e-82 307.8 254 65.4
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 7.6e-82 307.8 248 64.1
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 7.6e-82 307.8 250 64.8
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 2.2e-81 306.2 239 67.8
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 3.8e-81 305.4 237 67.1
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 3.8e-81 305.4 248 65.3
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 4.9e-81 305.1 247 64.8
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 4.9e-81 305.1 250 64.0
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 8.4e-81 304.3 248 63.3
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 1.1e-80 303.9 256 64.5
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.9e-80 303.1 230 67.4
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 3.2e-80 302.4 250 63.2
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 5.4e-80 301.6 247 65.6
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 7.1e-80 301.2 233 66.5
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 9.3e-80 300.8 254 65.0
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 9.3e-80 300.8 233 68.7
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 9.3e-80 300.8 230 67.8
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 9.3e-80 300.8 260 62.3
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 1.2e-79 300.4 230 65.7
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 1.6e-79 300.1 250 64.0
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 1.6e-79 300.1 250 64.0
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 2.1e-79 299.7 247 66.4
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 4.6e-79 298.5 223 69.1
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 6.0e-79 298.1 254 62.6
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 7.9e-79 297.7 230 67.8
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 2.3e-78 296.2 233 67.8
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 3.0e-78 295.8 229 65.9
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 8.7e-78 294.3 247 65.2
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 1.5e-77 293.5 206 73.8
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.3e-76 290.4 248 61.3
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 6.2e-76 288.1 259 58.3
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 8.1e-76 287.7 224 68.3
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 1.5e-74 283.5 202 73.3
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 1.4e-72 276.9 241 61.8
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 2.4e-72 276.2 248 59.7
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 2.1e-68 263.1 223 64.6
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 3.1e-67 259.2 188 69.7
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 5.3e-67 258.5 169 81.1
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 3.7e-60 235.7 248 55.2
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 3.4e-58 229.2 212 61.8
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 1.0e-54 217.6 168 68.5
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 5.1e-54 215.3 186 63.4
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 1.5e-53 213.8 217 56.2
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 1.9e-53 213.4 177 65.5
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 2.0e-50 203.4 141 70.2
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 1.0e-49 201.1 232 46.1
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 1.9e-48 196.8 235 48.1
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 4.1e-35 152.5 178 50.0
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 1.0e-33 147.9 113 64.6
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 8.2e-28 128.3 141 48.2
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 9.1e-27 124.8 141 46.8
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 4.7e-23 112.5 106 58.5
GSVIVG01028671001 Vitis vinifera HOM05D007814 ORTHO05D009902 7.7e-18 95.1 72 65.3
PRCOL_00001446 Prasinoderma coloniale HOM05D007814 ORTHO05D009902 6.1e-07 58.9 201 28.9
RcHm_v2.0_Chr6g0284811 Rosa chinensis HOM05D007814 ORTHO05D009902 4.0e-06 56.2 49 61.2


User provided reference genes

Program Settings