Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p28800 Brassica napus HOM05D007725 ORTHO05D009774 1.7e-175 619.8 465 100.0
BolC5t33143H Brassica oleracea HOM05D007725 ORTHO05D009774 4.6e-168 595.1 465 97.2
C05p44210 Brassica napus HOM05D007725 ORTHO05D009774 6.6e-167 591.3 465 97.0
Sp3g18200 Schrenkiella parvula HOM05D007725 ORTHO05D009774 1.8e-140 503.4 461 88.1
Carub.0003s2010 Capsella rubella HOM05D007725 ORTHO05D009774 1.4e-137 493.8 462 86.1
BcaB04g19094 Brassica carinata HOM05D007725 ORTHO05D009774 9.3e-137 491.1 460 87.2
CARHR095760 Cardamine hirsuta HOM05D007725 ORTHO05D009774 2.1e-136 490.0 460 84.1
AL3G33870 Arabidopsis lyrata HOM05D007725 ORTHO05D009774 8.7e-135 484.6 465 83.4
AT3G20170 Arabidopsis thaliana HOM05D007725 ORTHO05D009774 9.6e-134 481.1 465 85.6
A03p41610 Brassica napus HOM05D007725 ORTHO05D009774 1.6e-133 480.3 460 85.0
BraA03t13314Z Brassica rapa HOM05D007725 ORTHO05D009774 1.6e-133 480.3 460 85.0
BolC3t17381H Brassica oleracea HOM05D007725 ORTHO05D009774 2.8e-133 479.6 460 84.6
C03p50970 Brassica napus HOM05D007725 ORTHO05D009774 5.8e-131 471.9 460 83.9
Thhalv10020642m.g Eutrema salsugineum HOM05D007725 ORTHO05D009774 1.1e-129 467.6 461 82.9
Aa31LG8G7000 Aethionema arabicum HOM05D007725 ORTHO05D009774 1.9e-121 440.3 462 81.2
BraA05t21757Z Brassica rapa HOM05D007725 ORTHO05D009774 1.1e-113 414.5 214 98.1
Duzib170G0716 Durio zibethinus HOM05D007725 ORTHO05D009774 7.5e-62 242.3 458 53.7
COL.COLO4_09791 Corchorus olitorius HOM05D007725 ORTHO05D009774 2.7e-59 233.8 460 58.7
BcaC01g03576 Brassica carinata HOM05D007725 ORTHO05D009774 4.3e-57 226.5 460 42.6
Gorai.007G311000 Gossypium raimondii HOM05D007725 ORTHO05D009774 1.6e-56 224.6 454 44.3
Glyma.08G326100 Glycine max HOM05D007725 ORTHO05D009774 4.7e-56 223.0 464 55.8
Gohir.A11G277300 Gossypium hirsutum HOM05D007725 ORTHO05D009774 4.7e-56 223.0 453 47.7
Sopen12g007550 Solanum pennellii HOM05D007725 ORTHO05D009774 2.3e-55 220.7 457 54.9
VMungo0540G1375 Vigna mungo HOM05D007725 ORTHO05D009774 8.9e-55 218.8 461 54.7
PGSC0003DMG402029798 Solanum tuberosum HOM05D007725 ORTHO05D009774 9.8e-54 215.3 457 54.9
Peaxi162Scf00955g00014 Petunia axillaris HOM05D007725 ORTHO05D009774 2.2e-53 214.2 459 52.5
Lj1P886T16 Lonicera japonica HOM05D007725 ORTHO05D009774 3.7e-53 213.4 457 59.3
Solyc12g015650.3 Solanum lycopersicum HOM05D007725 ORTHO05D009774 4.9e-53 213.0 457 54.5
Nitab4.5_0002517g0030 Nicotiana tabacum HOM05D007725 ORTHO05D009774 2.4e-52 210.7 459 51.2
Cfa020227 Carpinus fangiana HOM05D007725 ORTHO05D009774 3.5e-51 206.8 476 55.7
ClCG09G021110 Citrullus lanatus HOM05D007725 ORTHO05D009774 1.3e-50 204.9 459 56.4
Manes.03G138100 Manihot esculenta HOM05D007725 ORTHO05D009774 2.3e-50 204.1 461 59.2
CSS0027076 Camellia sinensis var. sinensis HOM05D007725 ORTHO05D009774 3.9e-50 203.4 459 50.1
GSVIVG01037783001 Vitis vinifera HOM05D007725 ORTHO05D009774 5.1e-50 203.0 455 52.3
Gohir.D11G287700 Gossypium hirsutum HOM05D007725 ORTHO05D009774 8.6e-50 202.2 454 40.3
Medtr3g056580 Medicago truncatula HOM05D007725 ORTHO05D009774 8.6e-50 202.2 455 43.3
GSVIVG01037784001 Vitis vinifera HOM05D007725 ORTHO05D009774 2.5e-49 200.7 462 56.3
Psat5g175640 Pisum sativum HOM05D007725 ORTHO05D009774 4.3e-49 199.9 461 57.9
Ciclev10008214m.g Citrus clementina HOM05D007725 ORTHO05D009774 7.3e-49 199.1 464 54.1
arahy.Tifrunner.gnm1.ann1.TWJV4J Arachis hypogaea HOM05D007725 ORTHO05D009774 1.2e-48 198.4 440 56.1
Nitab4.5_0000163g0300 Nicotiana tabacum HOM05D007725 ORTHO05D009774 1.2e-48 198.4 459 56.4
Cpa.g.sc12.189 Carica papaya HOM05D007725 ORTHO05D009774 1.6e-48 198.0 458 53.5
Haze_09790 Corylus avellana HOM05D007725 ORTHO05D009774 2.8e-48 197.2 450 58.9
arahy.Tifrunner.gnm1.ann1.Q8DMES Arachis hypogaea HOM05D007725 ORTHO05D009774 4.0e-47 193.4 440 58.6
HanXRQChr11g0333971 Helianthus annuus HOM05D007725 ORTHO05D009774 4.0e-47 193.4 467 45.4
arahy.Tifrunner.gnm1.ann1.LCTM2T Arachis hypogaea HOM05D007725 ORTHO05D009774 5.2e-47 193.0 440 55.9
MELO3C024908.2 Cucumis melo HOM05D007725 ORTHO05D009774 2.0e-46 191.0 439 54.9
PSO478G1598 Papaver somniferum HOM05D007725 ORTHO05D009774 2.0e-46 191.0 463 55.3
Nn1g07446 Nelumbo nucifera HOM05D007725 ORTHO05D009774 1.3e-45 188.3 463 46.9
Cc05_g14730 Coffea canephora HOM05D007725 ORTHO05D009774 1.6e-43 181.4 458 55.5
CsaV3_7G018510 Cucumis sativus L. HOM05D007725 ORTHO05D009774 1.6e-43 181.4 458 55.5
Sed0002917 Sechium edule HOM05D007725 ORTHO05D009774 4.6e-43 179.9 440 57.5
Ca_26464_v3 Cicer arietinum L. HOM05D007725 ORTHO05D009774 1.0e-42 178.7 457 46.8
Nn1g03245 Nelumbo nucifera HOM05D007725 ORTHO05D009774 6.6e-42 176.0 461 48.6
MSTRG.15782 Avicennia marina HOM05D007725 ORTHO05D009774 7.3e-41 172.6 466 56.2
Hma1.2p1_2796F.1_g328670 Hydrangea macrophylla HOM05D007725 ORTHO05D009774 1.2e-40 171.8 460 55.2
EL10Ac4g07611 Beta vulgaris HOM05D007725 ORTHO05D009774 1.1e-39 168.7 342 53.8
Lj6g0016094 Lotus japonicus HOM05D007725 ORTHO05D009774 1.1e-39 168.7 455 56.0
TPR.G1953 Trifolium pratense HOM05D007725 ORTHO05D009774 1.8e-39 167.9 459 30.5
TAR624G0507 Trochodendron aralioides HOM05D007725 ORTHO05D009774 6.9e-39 166.0 456 54.4
Dinv10315 Davidia involucrata HOM05D007725 ORTHO05D009774 1.5e-38 164.9 342 53.5
Phvul.006G053700 Phaseolus vulgaris HOM05D007725 ORTHO05D009774 1.7e-37 161.4 361 59.6
Lj6g0024671 Lotus japonicus HOM05D007725 ORTHO05D009774 6.4e-37 159.5 457 54.9
Migut.M01753 Erythranthe guttata HOM05D007725 ORTHO05D009774 2.4e-36 157.5 459 55.3
Nn1g03425 Nelumbo nucifera HOM05D007725 ORTHO05D009774 2.4e-36 157.5 442 54.3
DCAR_022605 Daucus carota HOM05D007725 ORTHO05D009774 3.2e-36 157.1 436 44.7
Lj2g0017250 Lotus japonicus HOM05D007725 ORTHO05D009774 5.4e-36 156.4 453 39.1
QL08p005480 Quercus lobata HOM05D007725 ORTHO05D009774 5.4e-36 156.4 461 48.4
AUR62040655 Chenopodium quinoa HOM05D007725 ORTHO05D009774 7.8e-35 152.5 457 51.4
AUR62017062 Chenopodium quinoa HOM05D007725 ORTHO05D009774 1.3e-34 151.8 458 51.1
SEGI_22467 Sequoiadendron giganteum HOM05D007725 ORTHO05D009774 3.3e-33 147.1 447 54.6
SGA_v2.0_scaffold168G38532 Striga asiatica HOM05D007725 ORTHO05D009774 9.0e-31 139.0 347 31.4
PGR031G2940 Punica granatum HOM05D007725 ORTHO05D009774 3.4e-30 137.1 325 48.9
Lj6g0003901 Lotus japonicus HOM05D007725 ORTHO05D009774 9.9e-30 135.6 348 49.1
ATR1149G149 Amborella trichopoda HOM05D007725 ORTHO05D009774 2.2e-29 134.4 454 50.9
Oeu005490.1 Olea europaea HOM05D007725 ORTHO05D009774 3.2e-28 130.6 203 41.4
SalBow8G2031 Salvia bowleyana HOM05D007725 ORTHO05D009774 7.1e-28 129.4 436 56.9
COL.COLO4_09793 Corchorus olitorius HOM05D007725 ORTHO05D009774 1.3e-26 125.2 180 43.3
C04p21250 Brassica napus HOM05D007725 ORTHO05D009774 1.5e-25 121.7 104 63.5
BcaC02g11621 Brassica carinata HOM05D007725 ORTHO05D009774 3.8e-21 107.1 64 84.4
Thecc.07G022000 Theobroma cacao HOM05D007725 ORTHO05D009774 7.9e-19 99.4 178 37.6
BcaC02g11617 Brassica carinata HOM05D007725 ORTHO05D009774 1.8e-18 98.2 182 53.3
HPP92_006089 Vanilla planifolia HOM05D007725 ORTHO05D009774 3.1e-15 87.4 341 45.5
TPR.G1910 Trifolium pratense HOM05D007725 ORTHO05D009774 8.4e-13 79.3 62 62.9
BcaB06g26090 Brassica carinata HOM05D007725 ORTHO05D009774 2.3e-10 71.2 37 94.6


User provided reference genes

Program Settings