Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 1.7e-183 646.0 358 100.0
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.9e-182 642.5 358 99.4
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 5.8e-179 630.9 358 97.8
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 5.8e-179 630.9 358 97.8
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 2.4e-177 625.5 356 97.5
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 4.6e-168 594.7 358 93.3
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 1.0e-167 593.6 358 92.7
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 3.9e-167 591.7 358 92.2
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 4.3e-166 588.2 359 92.5
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 1.6e-165 586.3 358 92.5
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 3.4e-163 578.6 358 91.3
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 3.4e-163 578.6 358 91.3
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 4.2e-161 571.6 358 90.2
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 4.2e-161 571.6 358 90.2
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 6.7e-159 564.3 361 90.3
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 8.7e-159 563.9 356 89.3
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 3.3e-158 562.0 358 85.2
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 6.2e-157 557.8 358 89.9
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 2.0e-155 552.7 366 86.6
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 7.6e-155 550.8 333 93.1
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.7e-154 549.7 362 87.0
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 6.7e-143 511.1 361 81.7
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.2e-131 473.8 311 79.7
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 7.2e-129 464.5 341 72.7
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 1.6e-128 463.4 355 67.6
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 5.1e-127 458.4 305 87.5
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 6.7e-127 458.0 355 69.0
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 1.1e-126 457.2 344 68.6
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 1.1e-126 457.2 344 68.6
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 3.3e-126 455.7 344 68.3
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.3e-126 455.7 351 72.6
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 7.4e-126 454.5 341 70.7
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 7.4e-126 454.5 338 69.8
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 1.7e-125 453.4 351 67.8
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 4.8e-125 451.8 355 66.8
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 4.8e-125 451.8 357 70.9
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 4.8e-125 451.8 346 67.9
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 6.3e-125 451.4 358 67.9
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 6.3e-125 451.4 351 67.2
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 8.2e-125 451.1 364 66.5
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.1e-124 449.1 340 77.1
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 2.0e-123 446.4 365 65.2
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 5.9e-123 444.9 341 68.9
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 7.7e-123 444.5 365 64.9
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 1.0e-122 444.1 357 66.1
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 3.8e-122 442.2 355 67.3
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 3.8e-122 442.2 351 66.4
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 3.8e-122 442.2 357 66.4
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 5.0e-122 441.8 355 67.3
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 5.0e-122 441.8 352 68.2
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 6.5e-122 441.4 362 66.3
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 1.1e-121 440.7 357 65.5
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 1.4e-121 440.3 341 68.0
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 1.9e-121 439.9 352 68.5
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.9e-121 439.9 345 67.0
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 3.2e-121 439.1 360 64.7
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 5.5e-121 438.3 355 65.4
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 5.5e-121 438.3 361 66.5
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 9.4e-121 437.6 320 70.0
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 9.4e-121 437.6 360 64.7
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 1.6e-120 436.8 359 68.0
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 1.6e-120 436.8 359 68.0
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.6e-120 436.8 385 62.1
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 2.1e-120 436.4 344 66.9
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 2.7e-120 436.0 357 66.7
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 3.6e-120 435.6 385 62.1
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 3.6e-120 435.6 350 65.7
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 4.7e-120 435.3 359 67.7
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 4.7e-120 435.3 315 71.4
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 4.7e-120 435.3 379 63.1
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 4.7e-120 435.3 343 66.2
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 4.7e-120 435.3 348 66.1
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 8.0e-120 434.5 348 65.2
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 8.0e-120 434.5 361 63.4
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.4e-119 433.7 323 71.2
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 1.4e-119 433.7 352 64.8
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.4e-119 433.7 355 66.2
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 1.8e-119 433.3 359 67.4
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.3e-119 433.0 363 63.4
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 2.3e-119 433.0 323 69.7
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 8.8e-119 431.0 356 64.6
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.0e-118 429.9 343 65.3
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 5.7e-118 428.3 353 65.4
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 5.7e-118 428.3 364 63.7
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 1.3e-117 427.2 360 63.3
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 1.3e-117 427.2 363 63.9
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 1.7e-117 426.8 333 65.2
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.7e-117 426.8 359 64.1
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 2.2e-117 426.4 342 64.3
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 6.3e-117 424.9 354 63.8
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 6.3e-117 424.9 352 65.6
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 1.8e-116 423.3 349 64.2
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 4.1e-116 422.2 358 64.8
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 5.3e-116 421.8 359 65.7
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 5.3e-116 421.8 361 62.3
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 7.0e-116 421.4 322 67.1
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 7.0e-116 421.4 320 75.0
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.6e-115 420.2 355 63.9
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 2.0e-115 419.9 324 67.0
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 2.6e-115 419.5 351 62.1
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 4.5e-115 418.7 354 65.8
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 4.5e-115 418.7 345 63.2
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 1.0e-114 417.5 345 62.9
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.0e-114 417.5 354 64.4
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 1.3e-114 417.2 357 64.7
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 1.7e-114 416.8 357 65.0
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 2.2e-114 416.4 347 64.3
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 2.9e-114 416.0 330 66.4
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 3.8e-114 415.6 328 73.8
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 1.5e-113 413.7 354 63.0
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 3.2e-113 412.5 330 63.3
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 4.2e-113 412.1 325 64.9
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 9.4e-113 411.0 333 64.6
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 1.6e-112 410.2 355 63.1
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 4.0e-111 405.6 357 61.1
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 3.3e-110 402.5 359 59.9
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 1.7e-109 400.2 329 61.7
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 2.2e-109 399.8 325 65.2
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 2.4e-108 396.4 322 62.7
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 3.1e-108 396.0 362 58.0
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 9.1e-108 394.4 291 69.4
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 1.0e-106 391.0 354 59.9
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 1.3e-106 390.6 362 56.9
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 1.7e-106 390.2 452 52.0
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 8.5e-106 387.9 305 64.9
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 3.2e-105 386.0 357 57.7
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 4.2e-105 385.6 357 57.7
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 7.2e-105 384.8 264 81.8
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 3.6e-104 382.5 347 60.2
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 2.3e-103 379.8 323 62.2
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 3.1e-100 369.4 364 58.5
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 2.0e-99 366.7 327 58.4
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 2.7e-99 366.3 345 60.9
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 1.7e-98 363.6 350 54.9
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 1.3e-93 347.4 278 65.5
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 2.4e-84 316.6 334 50.0
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 1.7e-82 310.5 468 45.1
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 8.0e-80 301.6 325 56.6
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 8.9e-79 298.1 322 50.6
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 7.8e-75 285.0 346 48.6
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 1.0e-74 284.6 316 50.3
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 1.0e-74 284.6 208 69.2
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 2.3e-74 283.5 297 50.5
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 1.1e-73 281.2 323 52.9
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 5.4e-68 262.3 216 64.4
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 9.2e-68 261.5 221 62.9
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 1.5e-65 254.2 193 65.8
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 7.3e-65 251.9 213 64.3
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 8.1e-64 248.4 219 59.8
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 1.5e-62 244.2 223 59.6
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 8.4e-61 238.4 241 54.8
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 6.2e-56 222.2 295 43.1
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 3.4e-46 189.9 133 69.9
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 1.9e-44 184.1 141 66.0
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 9.3e-44 181.8 141 65.2
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 2.1e-32 144.1 119 63.9
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 8.2e-32 142.1 152 53.3
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 1.0e-21 108.6 212 29.7
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 8.5e-21 105.5 100 57.0
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 3.2e-20 103.6 108 55.6
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 6.1e-19 99.4 253 28.9
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 3.0e-10 70.5 92 40.2
BcaB01g01266 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-09 67.0 38 94.7
A03p67900 Brassica napus HOM05D006735 ORTHO05D009558 4.5e-06 56.6 36 75.0


User provided reference genes

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