Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p27540 Brassica napus HOM05D007568 ORTHO05D009779 1.0e-148 530.0 259 100.0
C02p26050 Brassica napus HOM05D007568 ORTHO05D009779 1.7e-143 512.7 259 96.9
BolC4t25354H Brassica oleracea HOM05D007568 ORTHO05D009779 2.9e-140 501.9 259 95.8
C02p26010 Brassica napus HOM05D007568 ORTHO05D009779 2.1e-98 362.8 223 78.0
BraA09t40709Z Brassica rapa HOM05D007568 ORTHO05D009779 1.7e-79 300.1 250 60.0
BcaB07g31875 Brassica carinata HOM05D007568 ORTHO05D009779 7.6e-72 274.6 245 55.5
BcaC05g26582 Brassica carinata HOM05D007568 ORTHO05D009779 2.2e-71 273.1 173 78.0
BcaB05g25263 Brassica carinata HOM05D007568 ORTHO05D009779 2.7e-69 266.2 245 54.7
BcaB04g18340 Brassica carinata HOM05D007568 ORTHO05D009779 6.9e-65 251.5 234 53.8
C07p00760 Brassica napus HOM05D007568 ORTHO05D009779 2.6e-56 223.0 244 45.5
BcaC01g06154 Brassica carinata HOM05D007568 ORTHO05D009779 3.9e-52 209.1 225 46.7
BolC3t14260H Brassica oleracea HOM05D007568 ORTHO05D009779 2.0e-51 206.8 225 46.2
C03p18690 Brassica napus HOM05D007568 ORTHO05D009779 4.3e-51 205.7 225 46.2
C09p27130 Brassica napus HOM05D007568 ORTHO05D009779 9.7e-51 204.5 225 46.2
BcaB04g20792 Brassica carinata HOM05D007568 ORTHO05D009779 1.3e-50 204.1 244 45.9
BolC9t55448H Brassica oleracea HOM05D007568 ORTHO05D009779 2.2e-50 203.4 225 46.2
A08p24970 Brassica napus HOM05D007568 ORTHO05D009779 2.8e-50 203.0 244 43.0
A02p32020 Brassica napus HOM05D007568 ORTHO05D009779 8.2e-50 201.4 225 44.9
BraA02t08213Z Brassica rapa HOM05D007568 ORTHO05D009779 8.2e-50 201.4 225 44.9
C01p17360 Brassica napus HOM05D007568 ORTHO05D009779 5.9e-48 195.3 242 40.9
C03p86040 Brassica napus HOM05D007568 ORTHO05D009779 2.2e-47 193.4 242 40.9
BcaC02g08832 Brassica carinata HOM05D007568 ORTHO05D009779 2.1e-45 186.8 242 41.7
BcaC01g01043 Brassica carinata HOM05D007568 ORTHO05D009779 1.4e-44 184.1 208 44.2
A03p66080 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-44 184.1 245 43.7
A05p17030 Brassica napus HOM05D007568 ORTHO05D009779 1.4e-44 184.1 245 43.7
A01p06890 Brassica napus HOM05D007568 ORTHO05D009779 3.9e-44 182.6 245 43.3
A07p36520 Brassica napus HOM05D007568 ORTHO05D009779 3.9e-44 182.6 200 43.0
A03p66230 Brassica napus HOM05D007568 ORTHO05D009779 6.7e-44 181.8 236 41.1
BcaB02g11011 Brassica carinata HOM05D007568 ORTHO05D009779 1.8e-41 173.7 219 41.1
BolC8t51027H Brassica oleracea HOM05D007568 ORTHO05D009779 6.5e-39 165.2 241 41.9
BraA03t15678Z Brassica rapa HOM05D007568 ORTHO05D009779 4.2e-38 162.5 179 43.6
BcaB08g34629 Brassica carinata HOM05D007568 ORTHO05D009779 5.5e-38 162.2 250 37.2
BcaB04g18026 Brassica carinata HOM05D007568 ORTHO05D009779 3.9e-36 156.0 181 40.9
BcaC09g50027 Brassica carinata HOM05D007568 ORTHO05D009779 2.0e-35 153.7 211 42.2
BolC2t10349H Brassica oleracea HOM05D007568 ORTHO05D009779 5.7e-35 152.1 228 39.9
C09p36930 Brassica napus HOM05D007568 ORTHO05D009779 1.8e-33 147.1 175 44.0
BolC9t56523H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-33 147.1 175 44.0
C01p25160 Brassica napus HOM05D030822 ORTHO05D009779 5.9e-32 142.1 176 43.2
BolC4t26648H Brassica oleracea HOM05D007568 ORTHO05D009779 1.0e-31 141.4 173 42.2
BolC7t45261H Brassica oleracea HOM05D007568 ORTHO05D009779 1.0e-31 141.4 176 42.6
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-30 137.9 143 45.5
C03p18140 Brassica napus HOM05D007568 ORTHO05D009779 2.5e-30 136.7 147 41.5
BcaC01g00913 Brassica carinata HOM05D007568 ORTHO05D009779 5.5e-30 135.6 169 39.6
BcaC09g50463 Brassica carinata HOM05D007568 ORTHO05D009779 5.5e-30 135.6 174 42.0
BcaB05g24631 Brassica carinata HOM05D007568 ORTHO05D009779 4.4e-27 125.9 170 38.2
C04p16590 Brassica napus HOM05D030822 ORTHO05D009779 6.3e-26 122.1 154 42.2
A07p20380 Brassica napus HOM05D007568 ORTHO05D009779 3.5e-24 116.3 106 52.8
BcaNung01428 Brassica carinata HOM05D007568 ORTHO05D009779 4.5e-24 115.9 187 37.4
A04p34410 Brassica napus HOM05D007568 ORTHO05D009779 7.7e-24 115.2 134 44.8
A03p65180 Brassica napus HOM05D007568 ORTHO05D009779 1.1e-22 111.3 109 46.8
BolC6t36043H Brassica oleracea HOM05D007568 ORTHO05D009779 5.5e-22 109.0 106 47.2
C04p50500 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-21 106.3 169 38.5
C03p85880 Brassica napus HOM05D007568 ORTHO05D009779 6.1e-21 105.5 155 36.8
BcaB07g30022 Brassica carinata HOM05D007568 ORTHO05D009779 6.8e-20 102.1 126 43.7
BolC2t11013H Brassica oleracea HOM05D007568 ORTHO05D009779 6.8e-20 102.1 174 37.4
BcaC05g29164 Brassica carinata HOM05D007568 ORTHO05D009779 2.0e-19 100.5 247 32.8
BcaC01g02309 Brassica carinata HOM05D007568 ORTHO05D009779 9.8e-19 98.2 130 40.0
BcaC01g02319 Brassica carinata HOM05D007568 ORTHO05D009779 8.3e-18 95.1 130 39.2
C06p20120 Brassica napus HOM05D007568 ORTHO05D009779 9.1e-17 91.7 165 30.9
BraA03t15576Z Brassica rapa HOM05D007568 ORTHO05D009779 9.1e-17 91.7 71 53.5
BolC8t50060H Brassica oleracea HOM05D007568 ORTHO05D009779 2.7e-16 90.1 133 38.3
A09p28960 Brassica napus HOM05D007568 ORTHO05D009779 4.5e-16 89.4 141 35.5
BolC4t23333H Brassica oleracea HOM05D007568 ORTHO05D009779 4.5e-16 89.4 142 35.9
BraA09t38460Z Brassica rapa HOM05D007568 ORTHO05D009779 4.5e-16 89.4 141 35.5
AL1G55590 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.9e-16 89.0 231 23.8
AL5G12730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.9e-16 89.0 226 27.0
AL9U11480 Arabidopsis lyrata HOM05D000353 ORTHO05D011313 7.7e-16 88.6 228 26.3
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 1.0e-15 88.2 143 35.0
AL1G50720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.9e-15 86.7 226 26.5
BolC5t34087H Brassica oleracea HOM05D007568 ORTHO05D009779 2.9e-15 86.7 60 63.3
AL27U10060 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL2G23190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL3G39070 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL7G11680 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL7G15190 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL7G49540 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL8G18830 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 22.9
AL8G23600 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.8e-15 86.3 231 23.4
AL1G50690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL1G59740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL2G16090 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL3G51030 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL4G20730 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL5G12670 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL5G19810 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL6G34510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL6G41960 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL8G20930 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL9U11530 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.0e-15 85.9 231 23.4
AL2G25150 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 8.6e-15 85.1 231 23.4
AL2G18690 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 220 24.1
AL2G22580 Arabidopsis lyrata HOM05D000022 ORTHO05D010269 1.1e-14 84.7 220 24.1
AL8G18160 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.1e-14 84.7 231 22.9
AL1G44420 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.9e-14 84.0 231 22.9
AL3G41740 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-14 83.6 230 23.0
AL7G48330 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.5e-14 81.6 231 22.9
AL8G17260 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.1e-13 80.5 231 22.5
Carub.0016s0014 Capsella rubella HOM05D012762 ORTHO05D011313 2.1e-13 80.5 217 28.1
AL6G43510 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.8e-13 80.1 210 25.2
AL2G19880 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 3.6e-13 79.7 234 27.8
A05p18670 Brassica napus HOM05D007568 ORTHO05D009779 3.6e-13 79.7 72 45.8
BolC8t48651H Brassica oleracea HOM05D000353 ORTHO05D000174 3.6e-13 79.7 248 28.2
BolC4t23434H Brassica oleracea HOM05D007568 ORTHO05D009779 4.7e-13 79.3 71 49.3
AL3G51050 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 6.1e-13 79.0 231 26.0
AL5G12680 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 6.1e-13 79.0 231 26.0
C05p33930 Brassica napus HOM05D030822 ORTHO05D099489 6.1e-13 79.0 70 55.7
BcaB08g34681 Brassica carinata HOM05D009963 ORTHO05D009779 8.0e-13 78.6 113 34.5
Carub.0012s0012 Capsella rubella HOM05D012762 ORTHO05D011313 2.3e-12 77.0 189 30.7
AL8G17270 Arabidopsis lyrata HOM05D007965 ORTHO05D023618 5.2e-12 75.9 200 27.0
A05p24570 Brassica napus HOM05D007568 ORTHO05D009779 6.8e-12 75.5 68 60.3
BcaB01g01501 Brassica carinata HOM05D000353 ORTHO05D000174 1.2e-11 74.7 248 25.0
AL2G19900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-11 73.9 206 25.7
AL2G22230 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-11 73.9 206 25.7
AL6G41900 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-11 73.9 206 25.7
AL7G11630 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.0e-11 73.9 206 25.7
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 2.0e-11 73.9 248 25.0
BcaNung06627 Brassica carinata HOM05D007568 ORTHO05D009779 3.4e-11 73.2 68 45.6
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-11 73.2 248 25.0
C04p18020 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-11 73.2 191 24.6
BolC4t23348H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-11 73.2 191 24.6
AL4G20700 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 4.4e-11 72.8 226 25.2
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.7e-11 72.4 227 24.2
AL2G23140 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 7.5e-11 72.0 229 21.0
A03p30420 Brassica napus HOM05D007568 ORTHO05D009779 7.5e-11 72.0 66 48.5
A03p64530 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-10 70.5 222 23.0
C01p49430 Brassica napus HOM05D007568 ORTHO05D009779 3.7e-10 69.7 102 37.3
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.9e-10 69.3 245 23.7
AL1G26430 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 6.3e-10 68.9 184 24.5
BolC1t05940H Brassica oleracea HOM05D007568 ORTHO05D027567 6.3e-10 68.9 88 39.8
C09p45610 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-09 67.8 222 22.5
Carub.0001s3741 Capsella rubella HOM05D000353 ORTHO05D000174 1.4e-09 67.8 236 24.2
BolC2t09294H Brassica oleracea HOM05D007568 ORTHO05D009779 1.8e-09 67.4 86 40.7
C04p17840 Brassica napus HOM05D007568 ORTHO05D014500 2.4e-09 67.0 111 33.3
BolC2t09295H Brassica oleracea HOM05D007568 ORTHO05D009779 2.4e-09 67.0 98 32.7
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 3.2e-09 66.6 241 23.2
C03p28750 Brassica napus HOM05D007568 ORTHO05D041881 3.2e-09 66.6 87 37.9
BolC3t15795H Brassica oleracea HOM05D007568 ORTHO05D041881 3.2e-09 66.6 87 37.9
AL2G19910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 5.4e-09 65.9 245 23.7
C04p31750 Brassica napus HOM05D000353 ORTHO05D000174 5.4e-09 65.9 223 21.5
BolC4t24724H Brassica oleracea HOM05D000353 ORTHO05D000174 5.4e-09 65.9 223 21.5
BcaB05g23080 Brassica carinata HOM05D009963 ORTHO05D013780 7.0e-09 65.5 112 33.9
BcaC07g38223 Brassica carinata HOM05D000353 ORTHO05D000174 7.0e-09 65.5 200 26.5
Carub.0001s3685 Capsella rubella HOM05D012762 ORTHO05D011313 7.0e-09 65.5 188 28.7
AL5G12720 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.2e-09 65.1 245 23.7
AL6G41910 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 9.2e-09 65.1 245 23.7
BcaB06g28316 Brassica carinata HOM05D000353 ORTHO05D000174 9.2e-09 65.1 243 23.5
C07p41190 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-08 63.9 222 21.6
AL2G22240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.7e-08 63.5 245 23.7
Carub.0149s0001 Capsella rubella HOM05D011333 ORTHO05D011313 2.7e-08 63.5 251 21.9
C01p31900 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-08 62.8 228 22.4
C08p32530 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-08 62.8 228 22.4
C07p13750 Brassica napus HOM05D000353 ORTHO05D000174 5.9e-08 62.4 225 23.1
BolC3t18107H Brassica oleracea HOM05D000353 ORTHO05D000174 5.9e-08 62.4 248 26.2
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 5.9e-08 62.4 214 23.8
BcaB05g22568 Brassica carinata HOM05D000353 ORTHO05D000174 7.8e-08 62.0 235 20.0
BcaC07g40033 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-07 61.6 202 21.8
BraA09t38906Z Brassica rapa HOM05D000353 ORTHO05D000174 1.0e-07 61.6 227 23.8
C09p27940 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-07 61.2 220 23.6
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-07 61.2 234 23.5
AL1G45320 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 1.7e-07 60.8 140 27.1
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-07 60.8 226 22.1
Carub.0007s3609 Capsella rubella HOM05D011333 ORTHO05D011313 1.7e-07 60.8 258 24.0
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 2.3e-07 60.5 200 24.5
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.9e-07 60.1 240 23.3
BcaB06g27257 Brassica carinata HOM05D000353 ORTHO05D000174 2.9e-07 60.1 237 21.9
C03p86410 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-07 60.1 222 21.2
AL9U11490 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 3.9e-07 59.7 240 23.8
C03p19550 Brassica napus HOM05D007568 ORTHO05D009779 3.9e-07 59.7 94 35.1
C04p22790 Brassica napus HOM05D007568 ORTHO05D027567 5.0e-07 59.3 85 35.3
Carub.0003s3392 Capsella rubella HOM05D000353 ORTHO05D000174 5.0e-07 59.3 226 23.0
BolC9t53770H Brassica oleracea HOM05D000353 ORTHO05D000174 8.6e-07 58.5 173 19.7
AL2G22210 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 1.5e-06 57.8 247 23.5
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.5e-06 57.8 240 22.9
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 240 22.9
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 240 22.9
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 240 22.9
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.9e-06 57.4 240 22.9
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 1.9e-06 57.4 240 22.9
C03p67580 Brassica napus HOM05D007568 ORTHO05D009779 1.9e-06 57.4 55 47.3
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.9e-06 57.4 126 26.2
AL1G50240 Arabidopsis lyrata HOM05D007965 ORTHO05D010269 2.5e-06 57.0 163 24.5
AL4G20680 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 2.5e-06 57.0 247 23.9
BcaC02g09404 Brassica carinata HOM05D007568 ORTHO05D009779 2.5e-06 57.0 59 42.4
Carub.0007s3603 Capsella rubella HOM05D000353 ORTHO05D011313 2.5e-06 57.0 241 22.4
BolC3t20878H Brassica oleracea HOM05D007568 ORTHO05D009779 3.3e-06 56.6 92 34.8
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 4.3e-06 56.2 240 22.9
BolC4t25735H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-06 55.8 173 19.1
AL1G59760 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.3e-06 55.5 234 24.4
AL5G12750 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.3e-06 55.5 234 24.4
AL7G11610 Arabidopsis lyrata HOM05D011333 ORTHO05D011313 7.3e-06 55.5 234 24.4
BcaC06g36422 Brassica carinata HOM05D007568 ORTHO05D009779 7.3e-06 55.5 82 34.1
ECA248G0780 Erigeron canadensis HOM05D000353 ORTHO05D000174 7.3e-06 55.5 216 24.1
BcaC05g28967 Brassica carinata HOM05D000353 ORTHO05D000174 9.5e-06 55.1 184 21.7


User provided reference genes

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