Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p26820 Brassica napus HOM05D000022 ORTHO05D010289 2.8e-73 278.5 136 100.0
BcaC05g28112 Brassica carinata HOM05D001285 ORTHO05D000199 2.5e-29 132.5 105 64.8
C05p41430 Brassica napus HOM05D000022 ORTHO05D010289 2.5e-29 132.5 105 64.8
BolC5t32881H Brassica oleracea HOM05D000022 ORTHO05D010289 2.5e-29 132.5 105 64.8
A05p26840 Brassica napus HOM05D000022 ORTHO05D010289 1.6e-28 129.8 105 62.9
BraA05t21563Z Brassica rapa HOM05D000022 ORTHO05D010289 1.6e-28 129.8 105 62.9
A05p26790 Brassica napus HOM05D000022 ORTHO05D010289 5.3e-24 114.8 103 60.2
BcaB06g26296 Brassica carinata HOM05D000022 ORTHO05D010289 1.2e-23 113.6 106 55.7
BolC5t32880H Brassica oleracea HOM05D000022 ORTHO05D010289 1.2e-23 113.6 99 60.6
C05p41390 Brassica napus HOM05D000022 ORTHO05D010289 1.5e-23 113.2 103 58.3
BcaB06g26394 Brassica carinata HOM05D000022 ORTHO05D010289 2.6e-23 112.5 105 56.2
BolC3t14202H Brassica oleracea HOM05D000022 ORTHO05D010289 3.8e-22 108.6 103 56.3
BcaB06g26298 Brassica carinata HOM05D000022 ORTHO05D010289 1.4e-21 106.7 96 59.4
BcaC05g28015 Brassica carinata HOM05D000022 ORTHO05D010289 1.4e-21 106.7 96 59.4
BolC5t32772H Brassica oleracea HOM05D000022 ORTHO05D010289 1.4e-21 106.7 96 59.4
A03p15360 Brassica napus HOM05D000022 ORTHO05D010289 1.9e-21 106.3 103 55.3
BraA03t10828Z Brassica rapa HOM05D000022 ORTHO05D010289 1.9e-21 106.3 103 55.3
BcaC01g06223 Brassica carinata HOM05D000022 ORTHO05D010289 3.2e-21 105.5 103 55.3
C03p17960 Brassica napus HOM05D000022 ORTHO05D010289 3.2e-21 105.5 103 55.3
C05p40310 Brassica napus HOM05D000022 ORTHO05D010289 9.4e-21 104.0 96 58.3
BcaC05g28113 Brassica carinata HOM05D000022 ORTHO05D010289 1.6e-20 103.2 107 51.4
A05p25930 Brassica napus HOM05D000022 ORTHO05D010289 1.6e-20 103.2 103 54.4
A05p26860 Brassica napus HOM05D000022 ORTHO05D010289 1.6e-20 103.2 108 52.8
C05p41440 Brassica napus HOM05D000022 ORTHO05D010289 1.6e-20 103.2 107 52.3
BolC5t32882H Brassica oleracea HOM05D000022 ORTHO05D010289 1.6e-20 103.2 107 52.3
BraA05t21479Z Brassica rapa HOM05D000022 ORTHO05D010289 1.6e-20 103.2 96 57.3
BraA05t21565Z Brassica rapa HOM05D000022 ORTHO05D010289 1.6e-20 103.2 108 52.8
BcaB06g26294 Brassica carinata HOM05D000022 ORTHO05D010289 2.7e-20 102.4 106 51.9
BcaC05g28114 Brassica carinata HOM05D000022 ORTHO05D010289 2.3e-19 99.4 106 51.9
C05p41460 Brassica napus HOM05D000022 ORTHO05D010289 2.3e-19 99.4 106 51.9
BolC5t32885H Brassica oleracea HOM05D000022 ORTHO05D010289 2.3e-19 99.4 106 51.9
A05p26880 Brassica napus HOM05D000022 ORTHO05D010289 8.8e-19 97.4 106 50.9
BraA05t21568Z Brassica rapa HOM05D000022 ORTHO05D010289 8.8e-19 97.4 106 50.9
BcaB06g26293 Brassica carinata HOM05D000022 ORTHO05D010289 1.1e-18 97.1 108 49.1
BcaB06g26297 Brassica carinata HOM05D000022 ORTHO05D010289 1.9e-18 96.3 66 74.2
BcaC05g28116 Brassica carinata HOM05D000022 ORTHO05D010289 3.3e-18 95.5 106 49.1
A05p26890 Brassica napus HOM05D000022 ORTHO05D010289 9.7e-18 94.0 103 49.5
BraA05t21569Z Brassica rapa HOM05D000022 ORTHO05D010289 9.7e-18 94.0 103 49.5
Thhalv10021912m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 6.3e-17 91.3 105 44.8
C05p41470 Brassica napus HOM05D000022 ORTHO05D010289 8.2e-17 90.9 107 48.6
BolC5t32886H Brassica oleracea HOM05D000022 ORTHO05D010289 8.2e-17 90.9 107 48.6
Sp5g14760 Schrenkiella parvula HOM05D000022 ORTHO05D010289 1.8e-16 89.7 105 48.6
AT3G21910 Arabidopsis thaliana HOM05D000022 ORTHO05D010289 2.0e-15 86.3 111 45.9
Carub.0003s2199 Capsella rubella HOM05D000022 ORTHO05D010289 5.9e-15 84.7 111 45.0
AL3G36090 Arabidopsis lyrata HOM05D000022 ORTHO05D010289 2.9e-14 82.4 105 45.7
AL3G36130 Arabidopsis lyrata HOM05D000022 ORTHO05D010289 3.8e-14 82.0 100 45.0
AL3G36100 Arabidopsis lyrata HOM05D000022 ORTHO05D010289 1.4e-13 80.1 77 53.2
BcaB04g20552 Brassica carinata HOM05D000022 ORTHO05D010289 1.9e-13 79.7 106 42.5
BcaC09g49135 Brassica carinata HOM05D000022 ORTHO05D010289 5.5e-13 78.2 106 40.6
BolC1t04183H Brassica oleracea HOM05D000022 ORTHO05D010289 5.5e-13 78.2 106 40.6
AT3G21920 Arabidopsis thaliana HOM05D000022 ORTHO05D010289 7.2e-13 77.8 100 43.0
AT3G21930 Arabidopsis thaliana HOM05D000022 ORTHO05D010289 7.2e-13 77.8 100 43.0
C01p42240 Brassica napus HOM05D000022 ORTHO05D010289 2.1e-12 76.3 106 40.6
A01p33070 Brassica napus HOM05D000022 ORTHO05D010289 2.7e-12 75.9 106 40.6
BraA01t03429Z Brassica rapa HOM05D000022 ORTHO05D010289 2.7e-12 75.9 106 40.6
Carub.0003s2201 Capsella rubella HOM05D000022 ORTHO05D010289 4.7e-12 75.1 100 41.0
Carub.0003s2203 Capsella rubella HOM05D000022 ORTHO05D000306 4.7e-12 75.1 108 43.5
AT3G22060 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 6.1e-12 74.7 105 39.0
BcaB04g20551 Brassica carinata HOM05D000022 ORTHO05D010289 6.1e-12 74.7 92 42.4
Carub.0003s2198 Capsella rubella HOM05D000022 ORTHO05D010289 7.9e-12 74.3 105 42.9
Carub.0003s2210 Capsella rubella HOM05D000022 ORTHO05D000306 1.0e-11 73.9 106 39.6
Carub.0003s2202 Capsella rubella HOM05D000022 ORTHO05D010289 1.4e-11 73.6 99 39.4
BcaB04g20550 Brassica carinata HOM05D000022 ORTHO05D010289 2.3e-11 72.8 92 41.3
AL3G36140 Arabidopsis lyrata HOM05D000022 ORTHO05D000306 3.9e-11 72.0 99 41.4
Carub.0003s2200 Capsella rubella HOM05D000022 ORTHO05D010289 5.1e-11 71.6 110 37.3
AL3G36200 Arabidopsis lyrata HOM05D000022 ORTHO05D000306 1.1e-10 70.5 96 40.6
AL3G36110 Arabidopsis lyrata HOM05D000022 ORTHO05D010289 1.5e-10 70.1 106 38.7
Thhalv10021371m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 4.4e-10 68.6 98 37.8
AL5G18930 Arabidopsis lyrata HOM05D000022 ORTHO05D038690 1.3e-09 67.0 113 38.9
Sp5g04470 Schrenkiella parvula HOM05D000022 ORTHO05D000306 1.3e-09 67.0 98 39.8
A05p26780 Brassica napus HOM05D000022 ORTHO05D000306 1.7e-09 66.6 105 35.2
BraA05t21559Z Brassica rapa HOM05D000022 ORTHO05D000306 1.7e-09 66.6 105 35.2
AT4G20530 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20540 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20550 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20560 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20570 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20580 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20590 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20600 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20610 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20620 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20630 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20640 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20645 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
AT4G20670 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.7e-09 65.5 96 37.5
BcaC09g49139 Brassica carinata HOM05D000022 ORTHO05D010289 3.7e-09 65.5 91 39.6
C01p42200 Brassica napus HOM05D000022 ORTHO05D010289 3.7e-09 65.5 91 39.6
BolC1t04181H Brassica oleracea HOM05D000022 ORTHO05D010289 3.7e-09 65.5 91 39.6
AT3G21990 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 6.3e-09 64.7 96 37.5
BcaC05g28111 Brassica carinata HOM05D000022 ORTHO05D000306 6.3e-09 64.7 105 35.2
A01p33060 Brassica napus HOM05D000022 ORTHO05D010289 6.3e-09 64.7 90 38.9
C05p41380 Brassica napus HOM05D000022 ORTHO05D000306 6.3e-09 64.7 105 35.2
BolC5t32878H Brassica oleracea HOM05D000022 ORTHO05D000306 6.3e-09 64.7 105 35.2
BraA01t03428Z Brassica rapa HOM05D000022 ORTHO05D010289 6.3e-09 64.7 90 38.9
AT3G21900 Arabidopsis thaliana HOM05D000022 ORTHO05D010289 1.1e-08 63.9 87 41.4
BcaB06g26302 Brassica carinata HOM05D000022 ORTHO05D000306 1.1e-08 63.9 105 35.2
CARHR097920 Cardamine hirsuta HOM05D000022 ORTHO05D000306 1.1e-08 63.9 98 35.7
ECA240G3651 Erigeron canadensis HOM05D000022 ORTHO05D000306 1.4e-08 63.5 96 34.4
Carub.0005s2512 Capsella rubella HOM05D000022 ORTHO05D000306 2.4e-08 62.8 95 37.9
Carub.0003s2222 Capsella rubella HOM05D000022 ORTHO05D000306 3.1e-08 62.4 98 35.7
Thhalv10022150m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 3.1e-08 62.4 107 36.4
Aa31LG8G8470 Aethionema arabicum HOM05D000022 ORTHO05D000306 7.0e-08 61.2 106 35.8
Thhalv10021994m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 7.0e-08 61.2 99 34.3
AL5G18920 Arabidopsis lyrata HOM05D000022 ORTHO05D012060 1.5e-07 60.1 96 38.5
ECA238G2716 Erigeron canadensis HOM05D000022 ORTHO05D000306 1.5e-07 60.1 96 32.3
CARHR168670 Cardamine hirsuta HOM05D000022 ORTHO05D000306 2.0e-07 59.7 98 34.7
Hma1.2p1_0613F.1_g189320 Hydrangea macrophylla HOM05D000022 ORTHO05D000306 2.0e-07 59.7 96 36.5
AT3G58310 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 3.4e-07 58.9 95 36.8
Carub.0003s2211 Capsella rubella HOM05D000022 ORTHO05D000306 3.4e-07 58.9 95 35.8
Thhalv10021973m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 3.4e-07 58.9 107 34.6
BcaB04g19189 Brassica carinata HOM05D000022 ORTHO05D012060 4.5e-07 58.5 103 36.9
COL.COLO4_30654 Corchorus olitorius HOM05D000022 ORTHO05D000306 4.5e-07 58.5 95 35.8
Thhalv10021965m.g Eutrema salsugineum HOM05D000022 ORTHO05D010289 4.5e-07 58.5 74 41.9
Nn1g03704 Nelumbo nucifera HOM05D000022 ORTHO05D000306 4.5e-07 58.5 92 38.0
Carub.0003s2212 Capsella rubella HOM05D000022 ORTHO05D000306 5.9e-07 58.2 111 36.9
Hma1.2p1_0613F.1_g189300 Hydrangea macrophylla HOM05D000022 ORTHO05D000306 5.9e-07 58.2 92 37.0
Thhalv10021968m.g Eutrema salsugineum HOM05D000022 ORTHO05D012060 7.7e-07 57.8 98 41.8
AT3G29040 Arabidopsis thaliana HOM05D000022 ORTHO05D012060 1.0e-06 57.4 96 37.5
PGR042G2884 Punica granatum HOM05D000022 ORTHO05D000306 1.0e-06 57.4 96 35.4
AT4G20680 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 1.3e-06 57.0 111 37.8
Lsat_1_v5_gn_9_118840 Lactuca sativa HOM05D000022 ORTHO05D000306 1.3e-06 57.0 96 35.4
Lsat_1_v5_gn_9_118880 Lactuca sativa HOM05D000022 ORTHO05D000306 1.3e-06 57.0 96 35.4
Lsat_1_v5_gn_9_119440 Lactuca sativa HOM05D000022 ORTHO05D000306 1.3e-06 57.0 96 35.4
BcaB04g19188 Brassica carinata HOM05D000022 ORTHO05D012060 2.2e-06 56.2 101 38.6
Lsat_1_v5_gn_0_41221 Lactuca sativa HOM05D000022 ORTHO05D000306 2.2e-06 56.2 96 35.4
TWI18G1227 Tripterygium wilfordii HOM05D000022 ORTHO05D000306 2.2e-06 56.2 93 36.6
Carub.0003s2206 Capsella rubella HOM05D000022 ORTHO05D000306 3.8e-06 55.5 108 35.2
Lj3g0006515 Lotus japonicus HOM05D000022 ORTHO05D000306 3.8e-06 55.5 95 36.8
Medtr2g088930 Medicago truncatula HOM05D000022 ORTHO05D000306 3.8e-06 55.5 91 33.0
Rhsim06G0157400 Rhododendron simsii HOM05D000022 ORTHO05D000306 3.8e-06 55.5 96 33.3
Thecc.06G111000 Theobroma cacao HOM05D000022 ORTHO05D000306 3.8e-06 55.5 95 34.7
Actinidia12494 Actinidia chinensis HOM05D000022 ORTHO05D000306 5.0e-06 55.1 94 33.0
AT3G22000 Arabidopsis thaliana HOM05D000022 ORTHO05D000306 5.0e-06 55.1 111 36.9
Prupe.3G110100 Prunus persica HOM05D000022 ORTHO05D000306 5.0e-06 55.1 91 34.1
Sp3g21050 Schrenkiella parvula HOM05D000022 ORTHO05D371285 5.0e-06 55.1 67 46.3
Cfa010202 Carpinus fangiana HOM05D000022 ORTHO05D000306 6.5e-06 54.7 91 36.3
Thhalv10022331m.g Eutrema salsugineum HOM05D000022 ORTHO05D010270 6.5e-06 54.7 108 32.4
Hma1.2p1_0613F.1_g189270 Hydrangea macrophylla HOM05D000022 ORTHO05D000306 6.5e-06 54.7 92 35.9
Lalb_Chr22g0349621 Lupinus albus HOM05D000022 ORTHO05D000306 6.5e-06 54.7 91 36.3
Prupe.3G110300 Prunus persica HOM05D000022 ORTHO05D000306 6.5e-06 54.7 96 33.3
Ciclev10017568m.g Citrus clementina HOM05D000022 ORTHO05D000306 8.5e-06 54.3 95 37.9
Thhalv10022184m.g Eutrema salsugineum HOM05D000022 ORTHO05D000306 8.5e-06 54.3 97 36.1
Gohir.D10G061200 Gossypium hirsutum HOM05D000022 ORTHO05D000306 8.5e-06 54.3 95 32.6
Gorai.011G065500 Gossypium raimondii HOM05D000022 ORTHO05D000306 8.5e-06 54.3 95 32.6
Rhsim06G0157300 Rhododendron simsii HOM05D000022 ORTHO05D000306 8.5e-06 54.3 96 32.3


User provided reference genes

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