Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 4.1e-251 870.9 446 100.0
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 4.1e-251 870.9 446 100.0
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 1.1e-240 836.3 450 96.2
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 7.6e-221 770.4 453 89.6
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 1.6e-215 752.7 445 88.8
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 2.1e-215 752.3 456 87.7
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 1.4e-214 749.6 437 89.2
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 5.3e-214 747.7 448 87.7
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 4.5e-213 744.6 460 87.0
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 1.5e-205 719.5 448 83.9
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 1.7e-199 699.5 390 90.5
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 6.7e-193 677.6 446 77.6
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 5.7e-184 647.9 414 75.8
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 1.1e-182 643.7 426 74.4
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 2.0e-181 639.4 429 73.9
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.0e-180 637.1 422 74.6
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 3.8e-180 635.2 422 74.4
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 5.0e-180 634.8 427 73.5
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 6.5e-180 634.4 415 74.0
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 9.4e-179 630.6 432 72.7
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 2.7e-178 629.0 427 73.8
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 6.1e-178 627.9 420 73.1
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 1.8e-177 626.3 426 73.7
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 5.2e-177 624.8 410 74.6
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 5.2e-177 624.8 410 74.4
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 6.7e-177 624.4 422 73.5
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 6.7e-177 624.4 433 72.1
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 2.0e-176 622.9 439 70.6
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 5.7e-176 621.3 410 73.4
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 7.5e-176 620.9 409 74.6
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 7.5e-176 620.9 430 71.2
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 1.7e-175 619.8 408 74.0
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 1.1e-174 617.1 414 72.9
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 1.8e-174 616.3 435 69.0
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 2.4e-174 615.9 427 71.7
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.1e-174 615.5 442 68.6
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 7.0e-174 614.4 437 68.9
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 1.6e-173 613.2 432 70.4
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 4.5e-173 611.7 410 72.2
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 5.9e-173 611.3 401 75.3
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 7.7e-173 610.9 428 70.8
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 2.9e-172 609.0 429 70.6
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 2.5e-171 605.9 410 72.9
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.5e-171 605.9 410 73.2
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 5.5e-171 604.7 422 72.0
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 7.2e-171 604.4 450 67.6
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 7.2e-171 604.4 410 72.0
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 2.3e-169 599.4 414 72.7
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 4.4e-168 595.1 388 75.0
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 3.7e-167 592.0 390 74.4
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 2.7e-165 585.9 459 65.1
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 3.8e-164 582.0 421 68.6
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 8.0e-162 574.3 408 68.4
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.4e-161 573.5 436 67.0
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 4.1e-158 562.0 410 65.9
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.0e-157 559.7 370 73.5
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 1.7e-156 556.6 368 73.4
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.6e-154 550.1 524 56.5
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 8.3e-151 537.7 639 48.4
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 6.0e-149 531.6 436 64.4
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 3.0e-148 529.3 282 96.5
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 1.2e-146 523.9 411 64.0
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 6.8e-145 518.1 349 73.9
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.0e-144 516.5 411 63.5
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 9.8e-144 514.2 420 63.6
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 2.9e-143 512.7 411 63.7
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 4.9e-143 511.9 432 61.3
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 1.1e-142 510.8 368 66.8
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 3.0e-140 502.7 411 59.4
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 2.5e-139 499.6 411 62.8
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 1.4e-137 493.8 410 60.7
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 2.3e-137 493.0 343 70.6
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 4.0e-137 492.3 353 70.0
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 7.5e-136 488.0 335 71.0
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 7.5e-136 488.0 436 55.7
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 7.5e-136 488.0 535 51.0
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 2.1e-133 479.9 321 71.3
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.7e-132 476.9 323 72.8
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 1.7e-132 476.9 414 58.0
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 1.5e-131 473.8 417 56.6
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.9e-131 473.4 409 60.1
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.2e-120 437.6 429 55.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 1.3e-116 424.1 422 55.2
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 7.6e-112 408.3 281 72.2
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 6.0e-109 398.7 286 70.6
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 7.9e-109 398.3 309 64.4
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 2.4e-105 386.7 282 69.1
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 3.1e-105 386.3 265 71.3
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.1e-102 377.9 442 47.7
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 6.2e-98 362.1 225 85.3
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 1.0e-87 328.2 304 56.2
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 2.2e-87 327.0 428 41.8
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 5.1e-84 315.8 316 52.8
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 1.3e-79 301.2 456 40.1
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 4.5e-72 276.2 196 70.9
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.1e-67 261.5 172 76.2
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 8.8e-60 235.3 200 58.0
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.8e-49 201.1 170 63.5
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 6.6e-47 192.6 121 76.9
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.0e-44 185.3 411 31.1
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 8.3e-42 175.6 122 66.4
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.7e-39 167.9 115 71.3
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 7.3e-38 162.5 102 77.5
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 1.2e-37 161.8 103 76.7
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 7.0e-33 146.0 78 88.5
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 7.0e-33 146.0 78 88.5
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 8.6e-31 139.0 75 85.3
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 4.3e-30 136.7 73 83.6
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.5e-19 101.7 62 69.4
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 7.3e-14 82.8 205 27.3
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 3.8e-10 70.5 53 58.5
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 1.1e-09 68.9 47 76.6
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 1.6e-08 65.1 46 71.7
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 1.3e-07 62.0 76 43.4
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 3.0e-07 60.8 42 66.7


User provided reference genes

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