Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 5.7e-157 557.8 326 100.0
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 5.7e-157 557.8 326 100.0
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 9.7e-141 503.8 320 91.2
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 9.7e-141 503.8 320 91.2
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 9.7e-141 503.8 320 91.2
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.3e-108 397.1 324 70.7
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 1.8e-107 393.3 320 69.7
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 1.8e-107 393.3 332 70.5
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 2.3e-105 386.3 329 69.0
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 2.3e-105 386.3 329 69.0
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 6.6e-105 384.8 332 72.9
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 4.4e-101 372.1 318 66.7
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 2.2e-100 369.8 324 65.4
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 3.3e-96 355.9 341 63.6
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 8.6e-89 331.3 335 60.6
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.8e-84 315.8 323 60.4
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.5e-72 277.3 339 54.9
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 2.5e-56 223.4 296 46.6
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.3e-55 221.1 296 47.0
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 1.4e-54 217.6 289 46.4
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 9.0e-54 214.9 314 46.8
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.0e-53 213.8 319 43.9
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 1.7e-52 210.7 304 45.4
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 4.9e-52 209.1 293 44.4
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 8.4e-52 208.4 307 44.3
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 1.4e-51 207.6 340 42.9
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.4e-51 207.6 322 43.8
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 2.5e-51 206.8 335 41.8
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 3.2e-51 206.5 288 45.1
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 1.2e-50 204.5 313 43.1
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.6e-50 204.1 286 45.5
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 7.9e-50 201.8 288 43.8
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 1.0e-49 201.4 313 44.1
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.0e-49 201.4 286 45.5
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.3e-49 201.1 308 42.2
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.1e-48 198.0 303 43.6
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.1e-48 198.0 298 43.6
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.1e-48 198.0 280 43.2
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.5e-48 196.8 271 44.6
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.5e-48 196.8 297 43.4
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 3.3e-48 196.4 305 42.3
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.3e-48 196.4 315 41.0
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 5.7e-48 195.7 294 43.2
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 7.4e-48 195.3 278 45.7
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 1.3e-47 194.5 281 44.8
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.3e-47 194.5 286 44.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 2.8e-47 193.4 289 40.8
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 3.7e-47 193.0 297 43.1
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 3.7e-47 193.0 352 38.6
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 6.3e-47 192.2 294 41.2
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 6.3e-47 192.2 279 42.7
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.4e-46 191.0 294 42.9
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 4.1e-46 189.5 304 41.8
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 4.1e-46 189.5 285 41.1
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 9.0e-46 188.3 288 43.4
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 9.0e-46 188.3 314 40.1
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 9.0e-46 188.3 292 40.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 9.0e-46 188.3 283 42.4
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 9.0e-46 188.3 379 37.7
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.2e-45 188.0 330 40.9
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 4.5e-45 186.0 314 40.4
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 7.6e-45 185.3 367 37.3
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 1.3e-44 184.5 293 41.6
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.3e-44 184.5 291 41.9
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.3e-44 184.5 282 41.5
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 2.9e-44 183.3 299 42.5
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.9e-44 183.3 280 42.9
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 2.9e-44 183.3 336 40.2
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 3.8e-44 183.0 305 39.0
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 3.8e-44 183.0 305 39.0
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 3.8e-44 183.0 280 43.2
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 3.8e-44 183.0 306 42.5
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 5.0e-44 182.6 303 40.9
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 8.5e-44 181.8 282 41.1
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.1e-43 181.4 296 42.9
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 1.4e-43 181.0 363 36.9
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 2.5e-43 180.3 327 39.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.5e-43 180.3 281 43.1
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 3.2e-43 179.9 323 39.3
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 1.2e-42 177.9 327 38.8
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 1.4e-41 174.5 254 41.7
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 3.9e-41 172.9 298 41.6
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 8.8e-41 171.8 284 39.4
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 8.8e-41 171.8 323 37.2
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 8.8e-41 171.8 295 40.0
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.9e-40 170.6 283 38.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 2.2e-39 167.2 225 47.1
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.1e-38 164.9 228 46.5
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 4.1e-38 162.9 342 38.6
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 5.3e-38 162.5 317 38.2
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 6.9e-38 162.2 261 39.5
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 6.9e-38 162.2 286 39.9
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 1.2e-37 161.4 299 39.5
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 5.9e-37 159.1 291 39.5
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 2.9e-36 156.8 214 46.7
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 5.0e-36 156.0 210 47.6
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 6.5e-36 155.6 293 37.5
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.9e-35 154.1 198 46.5
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.9e-35 154.1 219 46.6
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.9e-35 154.1 157 54.1
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 7.2e-35 152.1 338 36.4
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 9.4e-35 151.8 247 40.1
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 9.4e-35 151.8 322 35.7
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.7e-34 150.2 247 39.7
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 7.9e-34 148.7 336 34.8
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 1.4e-33 147.9 288 37.8
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 3.0e-33 146.7 283 35.0
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 6.7e-33 145.6 207 47.8
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 2.8e-31 140.2 305 33.8
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 3.1e-30 136.7 279 36.6
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.0e-29 134.0 326 32.5
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.7e-29 132.1 286 36.0
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 5.0e-28 129.4 345 30.7
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 3.0e-25 120.2 219 41.1
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 5.9e-21 105.9 147 46.3
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 8.5e-20 102.1 311 30.2
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 5.5e-19 99.4 196 34.7
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 8.0e-10 68.9 162 34.6
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.8e-09 67.8 46 67.4
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 1.5e-08 64.7 202 30.2
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 4.4e-08 63.2 333 22.8
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 2.4e-06 57.4 49 59.2
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 7.0e-06 55.8 49 59.2


User provided reference genes

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