Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p22020 Brassica napus HOM05D000920 ORTHO05D004854 8.8e-50 199.9 96 100.0
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 7.8e-38 160.2 96 82.3
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-35 152.1 94 81.9
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-35 152.1 96 80.2
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-33 143.7 92 77.2
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 4.7e-27 124.4 94 71.3
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-26 121.7 106 66.0
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 1.3e-24 116.3 106 64.2
BNapus_Darmor_BZH_scaffold_107p00320 Brassica napus HOM05D000920 ORTHO05D004854 3.5e-22 108.2 61 85.2
A05p22130 Brassica napus HOM05D000920 ORTHO05D004854 8.6e-21 103.6 82 69.5
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 1.9e-20 102.4 81 67.9
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-20 101.7 96 60.4
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 4.3e-20 101.3 95 58.9
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 4.3e-20 101.3 95 58.9
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-18 95.9 95 57.9
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 8.9e-18 93.6 71 70.4
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 1.2e-17 93.2 69 68.1
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 7.6e-17 90.5 95 54.7
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 2.2e-16 89.0 103 50.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 4.9e-16 87.8 96 53.1
A05p22070 Brassica napus HOM05D000920 ORTHO05D004854 8.3e-16 87.0 59 74.6
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 4.1e-15 84.7 57 75.4
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 4.1e-15 84.7 57 75.4
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 1.0e-13 80.1 50 80.0
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 2.3e-13 79.0 94 52.1
Sc21g0003270 Simmondsia chinensis HOM05D000920 ORTHO05D004854 3.0e-13 78.6 55 70.9
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 3.0e-13 78.6 100 49.0
A04p09260 Brassica napus HOM05D000920 ORTHO05D003704 3.9e-13 78.2 46 80.4
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 8.6e-13 77.0 97 45.4
Zm00001eb439260 Zea mays HOM05D010106 ORTHO05D000626 1.1e-12 76.6 100 52.0
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 1.5e-12 76.3 46 80.4
Zm00001eb262430 Zea mays HOM05D001847 ORTHO05D004854 1.5e-12 76.3 46 80.4
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 7.3e-12 73.9 52 73.1
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 9.6e-12 73.6 45 80.0
A06p24170 Brassica napus HOM05D000920 ORTHO05D000626 1.6e-11 72.8 64 60.9
Zm00001eb264000 Zea mays HOM05D000920 ORTHO05D004854 1.6e-11 72.8 47 78.7
Oeu043254.2 Olea europaea HOM05D000920 ORTHO05D022949 2.8e-11 72.0 47 76.6
EL10As19g24180 Beta vulgaris HOM05D000920 ORTHO05D004854 3.6e-11 71.6 47 76.6
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 3.6e-11 71.6 44 77.3
CSS0039809 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 6.2e-11 70.9 43 81.4
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-10 70.1 57 64.9
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 1.1e-10 70.1 57 64.9
CSS0007537 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 1.4e-10 69.7 43 79.1
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 3.1e-10 68.6 49 67.3
Zm00001eb264050 Zea mays HOM05D000920 ORTHO05D004854 4.0e-10 68.2 46 73.9
CSS0041785 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D024711 5.2e-10 67.8 43 79.1
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-09 65.9 86 47.7
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 3.4e-09 65.1 43 67.4
CSS0035511 Camellia sinensis var. sinensis HOM05D012847 ORTHO05D004854 4.4e-09 64.7 43 74.4
A05p22190 Brassica napus HOM05D008039 ORTHO05D000922 9.9e-09 63.5 53 64.2
A05p21940 Brassica napus HOM05D001018 ORTHO05D000626 2.2e-08 62.4 91 42.9
A06p25590 Brassica napus HOM05D000920 ORTHO05D000922 6.4e-08 60.8 84 51.2
A09p31420 Brassica napus HOM05D000920 ORTHO05D010211 1.1e-07 60.1 33 84.8
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 1.1e-07 60.1 41 70.7
A06p24120 Brassica napus HOM05D001018 ORTHO05D000626 5.4e-07 57.8 32 81.2
BNapus_Darmor_BZH_scaffold_107p00280 Brassica napus HOM05D000920 ORTHO05D004854 9.3e-07 57.0 41 73.2
A05p21920 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-06 55.8 32 81.2
Sc11g0005300 Simmondsia chinensis HOM05D012847 ORTHO05D014920 2.7e-06 55.5 37 75.7
Zm00001eb262370 Zea mays HOM05D010106 ORTHO05D000626 4.6e-06 54.7 31 80.6
Oeu009014.1 Olea europaea HOM05D026590 ORTHO05D004854 6.0e-06 54.3 47 59.6
PRCOL_00001067 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 6.0e-06 54.3 46 56.5
PRCOL_00001107 Prasinoderma coloniale HOM05D026590 ORTHO05D024711 6.0e-06 54.3 46 56.5
Zm00001eb437520 Zea mays HOM05D010106 ORTHO05D000626 7.8e-06 53.9 42 64.3


User provided reference genes

Program Settings