Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p20660 Brassica napus HOM05D000135 ORTHO05D011359 1.5e-39 166.4 132 100.0
BraA05t20974Z Brassica rapa HOM05D000135 ORTHO05D011359 1.4e-34 149.8 134 85.1
BcaB02g11072 Brassica carinata HOM05D000135 ORTHO05D011359 1.2e-33 146.7 132 82.6
Sp1g33430 Schrenkiella parvula HOM05D000135 ORTHO05D011359 5.3e-29 131.3 132 65.9
BcaB07g33677 Brassica carinata HOM05D000135 ORTHO05D011359 1.7e-27 126.3 131 61.8
Thhalv10012139m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 4.2e-26 121.7 108 71.3
A06p03870 Brassica napus HOM05D000135 ORTHO05D011359 1.0e-24 117.1 131 48.9
BraA06t23595Z Brassica rapa HOM05D000135 ORTHO05D011359 1.0e-24 117.1 131 48.9
BcaC08g43136 Brassica carinata HOM05D000135 ORTHO05D011359 3.9e-24 115.2 131 67.9
C06p04130 Brassica napus HOM05D000135 ORTHO05D011359 3.9e-24 115.2 131 67.9
BolC6t35541H Brassica oleracea HOM05D000135 ORTHO05D011359 2.6e-23 112.5 131 67.2
BcaC05g27517 Brassica carinata HOM05D000135 ORTHO05D011359 2.2e-22 109.4 133 72.2
Carub.0003s0255 Capsella rubella HOM05D000135 ORTHO05D011359 5.3e-21 104.8 132 40.9
AL3G13080 Arabidopsis lyrata HOM05D000227 ORTHO05D011359 4.5e-20 101.7 132 39.4
Thhalv10022182m.g Eutrema salsugineum HOM05D000135 ORTHO05D011359 1.0e-19 100.5 132 50.8
AT3G03410 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 1.6e-17 93.2 132 37.9
C05p34910 Brassica napus HOM05D000135 ORTHO05D011359 1.7e-14 83.2 67 70.1
BolC5t32216H Brassica oleracea HOM05D000135 ORTHO05D011359 1.7e-14 83.2 67 70.1
CARHR077430 Cardamine hirsuta HOM05D000135 ORTHO05D011359 2.4e-13 79.3 102 62.7
Sp3g02410 Schrenkiella parvula HOM05D000227 ORTHO05D011359 9.1e-13 77.4 108 48.1
Sp3g02400 Schrenkiella parvula HOM05D000135 ORTHO05D000203 6.5e-11 71.2 121 35.5
AL3G13072 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 9.4e-10 67.4 121 34.7
AL6G28550 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 9.4e-10 67.4 121 44.6
Thhalv10022417m.g Eutrema salsugineum HOM05D000135 ORTHO05D000203 1.2e-09 67.0 121 34.7
C06p04190 Brassica napus HOM05D000135 ORTHO05D011359 1.6e-09 66.6 45 68.9
Carub.0004s1794 Capsella rubella HOM05D000135 ORTHO05D000203 2.1e-09 66.2 120 33.3
AT3G03400 Arabidopsis thaliana HOM05D000135 ORTHO05D011359 2.7e-09 65.9 121 33.1
CARHR195730 Cardamine hirsuta HOM05D000135 ORTHO05D000203 2.7e-09 65.9 121 35.5
CARHR077420 Cardamine hirsuta HOM05D000135 ORTHO05D000203 4.7e-09 65.1 121 33.9
AT5G17470 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 6.1e-09 64.7 121 37.2
BcaC05g30534 Brassica carinata HOM05D000135 ORTHO05D011359 1.8e-08 63.2 109 33.0
AL4G32280 Arabidopsis lyrata HOM05D000135 ORTHO05D011359 6.7e-08 61.2 121 43.0
SGA_v2.0_scaffold5G02968 Striga asiatica HOM05D000135 ORTHO05D000203 6.7e-08 61.2 120 29.2
BcaC05g30277 Brassica carinata HOM05D000135 ORTHO05D011359 8.8e-08 60.8 109 32.1
C05p63420 Brassica napus HOM05D000227 ORTHO05D011359 1.5e-07 60.1 109 42.2
Carub.0004s0480 Capsella rubella HOM05D000135 ORTHO05D000203 5.7e-07 58.2 121 31.4
Carub.0006s1570 Capsella rubella HOM05D000135 ORTHO05D011359 7.5e-07 57.8 121 38.8
A03p01440 Brassica napus HOM05D000135 ORTHO05D000203 9.7e-07 57.4 119 31.1
BcaB01g05778 Brassica carinata HOM05D000135 ORTHO05D000203 1.7e-06 56.6 120 30.8
BcaC02g08883 Brassica carinata HOM05D000135 ORTHO05D000203 1.7e-06 56.6 119 43.7
C03p01770 Brassica napus HOM05D000135 ORTHO05D000203 1.7e-06 56.6 120 30.8
C04p49500 Brassica napus HOM05D000135 ORTHO05D000203 1.7e-06 56.6 119 43.7
BolC3t12732H Brassica oleracea HOM05D000135 ORTHO05D000203 1.7e-06 56.6 120 30.8
BolC4t26538H Brassica oleracea HOM05D000135 ORTHO05D000203 1.7e-06 56.6 119 43.7
Sp7g04260 Schrenkiella parvula HOM05D000135 ORTHO05D000203 1.7e-06 56.6 116 36.2
AT2G36180 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 2.2e-06 56.2 118 32.2
BcaB06g27704 Brassica carinata HOM05D000135 ORTHO05D000203 2.8e-06 55.8 119 43.7
BraA03t09523Z Brassica rapa HOM05D000135 ORTHO05D000203 4.8e-06 55.1 121 29.8
CARHR058370 Cardamine hirsuta HOM05D000135 ORTHO05D000203 6.3e-06 54.7 123 27.6


User provided reference genes

Program Settings