Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p17400 Brassica napus HOM05D000675 ORTHO05D019849 1.0e-69 266.5 130 100.0
BraA06t25677Z Brassica rapa HOM05D000675 ORTHO05D019849 3.5e-57 224.9 120 93.3
C06p35350 Brassica napus HOM05D000675 ORTHO05D019849 5.2e-45 184.5 125 79.2
BolC5t31432H Brassica oleracea HOM05D000675 ORTHO05D019849 5.4e-42 174.5 109 84.4
A10p08730 Brassica napus HOM05D000675 ORTHO05D019849 1.1e-31 140.2 124 69.4
C07p04710 Brassica napus HOM05D000675 ORTHO05D000395 8.9e-29 130.6 136 52.2
BcaC05g26837 Brassica carinata HOM05D000675 ORTHO05D019849 3.4e-28 128.6 78 84.6
C06p33690 Brassica napus HOM05D000675 ORTHO05D000395 8.3e-27 124.0 141 54.6
A01p22890 Brassica napus HOM05D000675 ORTHO05D013243 2.1e-25 119.4 131 48.9
C04p10840 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-24 115.9 157 47.8
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 2.3e-24 115.9 160 46.2
C05p33310 Brassica napus HOM05D000675 ORTHO05D000395 2.5e-23 112.5 160 45.0
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 7.3e-23 110.9 160 45.0
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-20 102.4 161 37.3
C03p35030 Brassica napus HOM05D000675 ORTHO05D000395 3.4e-20 102.1 160 43.8
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 7.6e-20 100.9 161 37.3
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 7.6e-20 100.9 161 37.3
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-19 99.8 128 39.1
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 6.4e-19 97.8 128 39.8
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-18 96.7 157 42.7
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 3.2e-18 95.5 142 43.7
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-18 94.7 126 41.3
BcaC02g10974 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-18 94.7 157 40.8
BolC4t23150H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-16 90.5 151 40.4
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-16 90.1 151 40.4
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 1.3e-16 90.1 151 40.4
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-16 90.1 151 40.4
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-16 90.1 151 40.4
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-16 90.1 151 40.4
BraA07t28911Z Brassica rapa HOM05D000675 ORTHO05D000395 2.3e-16 89.4 109 46.8
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-16 89.0 151 39.7
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-16 88.6 164 35.4
BcaC04g21549 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-15 87.0 75 62.7
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 1.5e-15 86.7 165 38.8
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-15 86.7 149 38.9
BcaB04g17681 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-15 85.9 128 38.3
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 3.3e-15 85.5 157 40.1
BolC8t48443H Brassica oleracea HOM05D000675 ORTHO05D013243 7.3e-15 84.3 71 62.0
BcaC07g38048 Brassica carinata HOM05D000675 ORTHO05D013243 1.3e-14 83.6 71 62.0
BolC4t25485H Brassica oleracea HOM05D000675 ORTHO05D000395 1.6e-14 83.2 144 36.1
A08p07920 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-14 82.8 106 43.4
C01p26930 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-14 82.8 114 40.4
BolC1t02639H Brassica oleracea HOM05D000675 ORTHO05D000395 2.1e-14 82.8 114 40.4
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-14 82.4 162 34.6
A10p26180 Brassica napus HOM05D000675 ORTHO05D000395 6.2e-14 81.3 104 42.3
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 1.8e-13 79.7 130 36.2
BolC2t09930H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-13 79.7 143 36.4
BolC5t30408H Brassica oleracea HOM05D000675 ORTHO05D000395 1.8e-13 79.7 149 34.9
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 1.8e-13 79.7 130 36.2
C02p39190 Brassica napus HOM05D000675 ORTHO05D000395 5.3e-13 78.2 143 36.4
BolC1t03531H Brassica oleracea HOM05D000675 ORTHO05D000395 1.2e-12 77.0 92 45.7
BcaB06g27534 Brassica carinata HOM05D000675 ORTHO05D000395 2.6e-12 75.9 88 47.7
A02p08880 Brassica napus HOM05D000675 ORTHO05D013243 2.6e-12 75.9 92 51.1
BolC5t33747H Brassica oleracea HOM05D000675 ORTHO05D104666 2.6e-12 75.9 48 85.4
BraA02t05957Z Brassica rapa HOM05D000675 ORTHO05D013243 2.6e-12 75.9 92 51.1
BcaC05g26973 Brassica carinata HOM05D000675 ORTHO05D013243 5.8e-12 74.7 70 60.0
C03p49550 Brassica napus HOM05D000675 ORTHO05D040856 1.3e-11 73.6 94 45.7
BolC3t17251H Brassica oleracea HOM05D000675 ORTHO05D000395 1.3e-11 73.6 94 45.7
A08p06340 Brassica napus HOM05D000675 ORTHO05D000395 1.7e-11 73.2 90 51.1
C06p46010 Brassica napus HOM05D000675 ORTHO05D000395 6.4e-11 71.2 94 46.8
BcaC01g01732 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-11 70.9 117 35.9
BolC4t25530H Brassica oleracea HOM05D000675 ORTHO05D000395 8.4e-11 70.9 120 36.7
BolC9t57807H Brassica oleracea HOM05D000675 ORTHO05D013243 8.4e-11 70.9 66 53.0
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-10 69.7 117 35.9
BraA07t28421Z Brassica rapa HOM05D000675 ORTHO05D000395 2.4e-10 69.3 92 48.9
BolC6t38640H Brassica oleracea HOM05D000675 ORTHO05D019849 3.2e-10 68.9 48 75.0
Thhalv10027512m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 3.2e-10 68.9 111 36.9
BraA10t43278Z Brassica rapa HOM05D000675 ORTHO05D000395 4.2e-10 68.6 94 43.6
BcaB01g01025 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-10 68.2 103 37.9
BcaC01g03691 Brassica carinata HOM05D000675 ORTHO05D000395 5.4e-10 68.2 113 38.9
BcaB01g02520 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-09 66.6 114 34.2
BcaC04g18662 Brassica carinata HOM05D000675 ORTHO05D000395 1.6e-09 66.6 124 34.7
Thhalv10015254m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.6e-09 66.6 90 43.3
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-09 66.2 73 50.7
A02p27950 Brassica napus HOM05D000675 ORTHO05D013243 2.1e-09 66.2 75 56.0
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 2.1e-09 66.2 73 50.7
AL4G30840 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 2.7e-09 65.9 121 37.2
AT1G36970 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 2.7e-09 65.9 125 32.8
A07p03550 Brassica napus HOM05D000675 ORTHO05D033415 2.7e-09 65.9 60 60.0
CARHR150440 Cardamine hirsuta HOM05D000675 ORTHO05D000395 2.7e-09 65.9 126 37.3
BcaC05g25771 Brassica carinata HOM05D000675 ORTHO05D021848 3.5e-09 65.5 134 35.1
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 4.6e-09 65.1 119 36.1
BcaB03g15207 Brassica carinata HOM05D000675 ORTHO05D000395 4.6e-09 65.1 124 35.5
A06p22650 Brassica napus HOM05D000675 ORTHO05D000395 4.6e-09 65.1 111 35.1
BcaNung03743 Brassica carinata HOM05D000675 ORTHO05D000395 6.0e-09 64.7 116 35.3
A10p13650 Brassica napus HOM05D000675 ORTHO05D000395 6.0e-09 64.7 112 34.8
C07p33000 Brassica napus HOM05D000675 ORTHO05D000395 6.0e-09 64.7 126 32.5
BraA07t31229Z Brassica rapa HOM05D000675 ORTHO05D000395 6.0e-09 64.7 112 34.8
Thhalv10002316m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.0e-09 64.7 111 35.1
A01p35410 Brassica napus HOM05D000675 ORTHO05D013243 7.8e-09 64.3 75 54.7
A06p28200 Brassica napus HOM05D000675 ORTHO05D013243 7.8e-09 64.3 75 54.7
C05p25460 Brassica napus HOM05D000675 ORTHO05D000395 7.8e-09 64.3 117 34.2
C01p31580 Brassica napus HOM05D000675 ORTHO05D013510 1.0e-08 63.9 95 37.9
C03p78160 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-08 63.9 111 36.0
C06p32570 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-08 63.9 114 35.1
C07p27890 Brassica napus HOM05D000675 ORTHO05D000395 1.0e-08 63.9 114 34.2
BolC7t40834H Brassica oleracea HOM05D000675 ORTHO05D000395 1.0e-08 63.9 111 36.0
BcaC04g21582 Brassica carinata HOM05D000675 ORTHO05D000395 1.3e-08 63.5 112 34.8
BolC6t36483H Brassica oleracea HOM05D000675 ORTHO05D032234 1.3e-08 63.5 114 34.2
BraA01t02713Z Brassica rapa HOM05D000675 ORTHO05D027218 1.3e-08 63.5 111 36.0
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-08 63.2 138 35.5
BolC4t25936H Brassica oleracea HOM05D000675 ORTHO05D000395 1.7e-08 63.2 112 33.0
BcaC02g10278 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-08 62.8 111 36.0
C05p28300 Brassica napus HOM05D000675 ORTHO05D013243 2.3e-08 62.8 87 47.1
C06p37640 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-08 62.8 112 34.8
C07p23780 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-08 62.8 114 34.2
BolC2t12302H Brassica oleracea HOM05D000675 ORTHO05D000395 2.3e-08 62.8 112 34.8
BcaC03g18179 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-08 62.4 112 34.8
A05p23390 Brassica napus HOM05D000675 ORTHO05D000395 3.0e-08 62.4 111 34.2
BraA05t21202Z Brassica rapa HOM05D000675 ORTHO05D000395 3.0e-08 62.4 111 34.2
BcaC01g05607 Brassica carinata HOM05D000675 ORTHO05D000395 3.9e-08 62.0 108 35.2
BolC3t14487H Brassica oleracea HOM05D018291 ORTHO05D019888 3.9e-08 62.0 89 48.3
C04p36560 Brassica napus HOM05D000675 ORTHO05D000395 6.6e-08 61.2 112 33.0
BolC3t14837H Brassica oleracea HOM05D000675 ORTHO05D000395 6.6e-08 61.2 111 35.1
BolC4t25141H Brassica oleracea HOM05D000675 ORTHO05D000395 6.6e-08 61.2 112 33.0
BcaB05g24643 Brassica carinata HOM05D000675 ORTHO05D000395 8.7e-08 60.8 114 35.1
BcaC01g00314 Brassica carinata HOM05D000675 ORTHO05D000395 8.7e-08 60.8 110 34.5
BraA02t08657Z Brassica rapa HOM05D000675 ORTHO05D021814 8.7e-08 60.8 114 34.2
Thhalv10029293m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.7e-08 60.8 111 34.2
BcaB07g32139 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-07 60.1 114 32.5
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 1.5e-07 60.1 133 35.3
BcaNung03607 Brassica carinata HOM05D000675 ORTHO05D000395 1.9e-07 59.7 97 37.1
A07p03370 Brassica napus HOM05D000675 ORTHO05D000395 1.9e-07 59.7 120 35.0
BraA05t19895Z Brassica rapa HOM05D000675 ORTHO05D000395 1.9e-07 59.7 39 64.1
Carub.0001s3343 Capsella rubella HOM05D000675 ORTHO05D000395 1.9e-07 59.7 118 34.7
BcaB06g26589 Brassica carinata HOM05D000675 ORTHO05D000395 2.5e-07 59.3 114 33.3
Thhalv10024063m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 2.5e-07 59.3 111 33.3
BcaB07g31602 Brassica carinata HOM05D000675 ORTHO05D000395 3.3e-07 58.9 114 33.3
A07p36210 Brassica napus HOM05D000675 ORTHO05D013243 4.3e-07 58.5 64 51.6
Thhalv10002281m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.3e-07 58.5 108 34.3
BcaC02g09792 Brassica carinata HOM05D000675 ORTHO05D000395 5.6e-07 58.2 112 32.1
A09p51440 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-07 58.2 120 34.2
BolC8t46874H Brassica oleracea HOM05D000675 ORTHO05D000395 5.6e-07 58.2 112 33.0
Thhalv10012388m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 5.6e-07 58.2 111 33.3
BcaB05g22367 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-07 57.8 114 32.5
BcaC03g14557 Brassica carinata HOM05D000675 ORTHO05D000395 7.3e-07 57.8 99 37.4
Carub.0004s0647 Capsella rubella HOM05D000675 ORTHO05D000395 7.3e-07 57.8 130 29.2
Thhalv10012358m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.6e-07 57.4 109 33.9
Thhalv10029439m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 9.6e-07 57.4 119 30.3
A08p09110 Brassica napus HOM05D000675 ORTHO05D000395 1.6e-06 56.6 56 51.8
BcaC09g51286 Brassica carinata HOM05D000675 ORTHO05D000395 2.1e-06 56.2 56 50.0
A08p04840 Brassica napus HOM05D000675 ORTHO05D041170 2.1e-06 56.2 79 46.8
C01p14780 Brassica napus HOM05D000675 ORTHO05D000395 2.1e-06 56.2 56 50.0
BcaB04g20306 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-06 55.8 120 30.8
BcaC08g45572 Brassica carinata HOM05D000675 ORTHO05D000395 2.8e-06 55.8 114 32.5
A09p50420 Brassica napus HOM05D000675 ORTHO05D000395 3.6e-06 55.5 120 33.3
BraA05t20960Z Brassica rapa HOM05D000675 ORTHO05D033165 3.6e-06 55.5 61 52.5
Carub.0009s0004 Capsella rubella HOM05D000675 ORTHO05D000395 3.6e-06 55.5 96 36.5
AL1G57250 Arabidopsis lyrata HOM05D000675 ORTHO05D000395 4.8e-06 55.1 131 31.3
BcaB02g11112 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-06 55.1 107 34.6
BcaC09g49264 Brassica carinata HOM05D000675 ORTHO05D000395 4.8e-06 55.1 120 31.7
A07p13050 Brassica napus HOM05D000675 ORTHO05D021848 4.8e-06 55.1 75 41.3
C05p51330 Brassica napus HOM05D000675 ORTHO05D000395 4.8e-06 55.1 113 32.7
BraA01t02216Z Brassica rapa HOM05D000675 ORTHO05D000395 4.8e-06 55.1 89 36.0
BraA08t32511Z Brassica rapa HOM05D000675 ORTHO05D041170 4.8e-06 55.1 79 46.8
BraA09t38562Z Brassica rapa HOM05D000675 ORTHO05D002086 4.8e-06 55.1 114 31.6
BcaB02g11265 Brassica carinata HOM05D000675 ORTHO05D000395 6.2e-06 54.7 53 52.8
A10p17730 Brassica napus HOM05D000675 ORTHO05D033165 6.2e-06 54.7 80 45.0
Carub.0029s0001 Capsella rubella HOM05D000675 ORTHO05D000395 6.2e-06 54.7 130 30.0
BcaB05g24010 Brassica carinata HOM05D000675 ORTHO05D000395 8.1e-06 54.3 58 46.6
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 8.1e-06 54.3 75 42.7
BcaC01g02919 Brassica carinata HOM05D000675 ORTHO05D000395 8.1e-06 54.3 114 32.5
CARHR283870 Cardamine hirsuta HOM05D000675 ORTHO05D000395 8.1e-06 54.3 53 49.1


User provided reference genes

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