Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.5e-247 857.4 423 100.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.2e-244 849.4 423 98.8
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 1.3e-238 829.3 426 96.7
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 1.3e-238 829.3 426 96.7
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 1.0e-219 766.5 429 87.9
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 5.7e-210 734.2 426 84.3
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.6e-205 717.6 432 81.2
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 2.8e-204 715.3 431 81.9
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 6.8e-203 710.7 431 80.5
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.0e-198 696.8 432 79.4
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.4e-187 659.8 435 76.3
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 6.2e-164 581.3 415 68.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 2.5e-136 489.6 405 58.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.7e-132 475.7 412 57.3
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.2e-130 470.7 446 54.7
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.5e-130 468.8 406 57.6
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 7.7e-130 468.0 425 56.2
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 7.7e-130 468.0 432 56.0
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.7e-129 466.8 406 57.6
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 5.0e-129 465.3 399 58.1
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 8.5e-129 464.5 405 56.3
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.4e-128 463.8 405 56.0
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.2e-128 462.6 405 57.5
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 4.2e-128 462.2 404 57.2
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 5.5e-128 461.8 405 56.0
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 7.2e-128 461.5 420 56.4
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 7.2e-128 461.5 417 54.9
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.2e-127 460.7 415 55.9
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 3.6e-127 459.1 404 57.2
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 6.1e-127 458.4 413 54.7
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 6.1e-127 458.4 399 57.4
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.8e-126 456.8 414 56.8
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.3e-126 456.4 406 56.4
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 2.3e-126 456.4 420 56.0
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 2.3e-126 456.4 420 56.0
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 6.7e-126 454.9 415 56.6
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 6.7e-126 454.9 427 54.3
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 2.0e-125 453.4 402 58.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.0e-125 453.4 405 55.8
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 2.6e-125 453.0 415 56.4
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 3.3e-125 452.6 424 55.7
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 4.4e-125 452.2 430 53.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 4.4e-125 452.2 413 54.7
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.7e-124 450.3 411 54.5
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 4.8e-124 448.7 422 56.2
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 6.3e-124 448.4 404 55.0
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.1e-123 447.6 414 55.8
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 1.1e-123 447.6 434 53.5
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.4e-123 447.2 429 55.7
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 4.1e-123 445.7 404 54.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 9.1e-123 444.5 389 58.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.2e-122 444.1 417 53.7
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.5e-122 443.7 422 55.7
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.0e-122 443.4 405 54.1
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 2.2e-121 439.9 404 54.2
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.8e-121 439.1 408 53.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 5.0e-121 438.7 405 53.6
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 8.5e-121 438.0 429 53.1
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 1.1e-120 437.6 415 54.9
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 1.1e-120 437.6 406 53.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.1e-120 437.6 400 54.2
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.9e-120 436.8 405 55.8
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 2.5e-120 436.4 405 53.6
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 3.2e-120 436.0 429 52.9
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 7.2e-120 434.9 419 53.5
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 7.2e-120 434.9 411 55.2
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 1.6e-119 433.7 408 52.9
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 3.6e-119 432.6 432 52.3
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 4.7e-119 432.2 408 53.2
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 8.0e-119 431.4 414 51.9
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.3e-118 429.9 413 52.8
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.2e-118 428.7 403 53.8
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 5.2e-118 428.7 386 57.0
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.3e-117 426.0 400 54.5
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 9.7e-117 424.5 405 53.3
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.8e-116 422.2 421 50.1
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 6.3e-116 421.8 415 54.0
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 8.2e-116 421.4 424 53.1
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 3.1e-115 419.5 214 96.3
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 5.3e-115 418.7 377 57.3
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.1e-112 411.0 398 51.3
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.6e-111 406.0 367 55.9
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 6.1e-111 405.2 393 52.9
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 7.5e-109 398.3 202 97.0
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 9.7e-109 397.9 386 52.8
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 2.0e-106 390.2 353 55.2
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.0e-106 390.2 520 43.5
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.1e-104 384.4 413 48.2
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.4e-102 377.5 351 53.8
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.0e-101 373.6 357 53.8
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 5.7e-101 372.1 368 52.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 4.1e-99 365.9 430 47.0
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.4e-99 365.5 403 47.9
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 7.0e-99 365.2 441 45.1
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.0e-89 334.7 303 54.5
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.3e-86 323.6 428 42.1
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.6e-79 300.8 303 51.2
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 8.3e-68 261.9 425 36.9
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.0e-65 255.0 289 48.8
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 1.4e-62 244.6 461 34.7
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 3.3e-56 223.4 271 45.0
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.1e-51 205.7 238 48.7
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 3.0e-49 200.3 204 47.5
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 4.6e-42 176.4 162 53.1
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 2.0e-37 161.0 113 66.4
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 2.9e-36 157.1 244 38.1
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.8e-36 156.8 123 61.8
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.4e-32 142.5 140 52.1
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.5e-29 134.8 180 42.2
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.7e-15 88.2 101 42.6
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 3.8e-12 77.0 104 41.3
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 8.5e-12 75.9 101 36.6
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 4.2e-11 73.6 123 39.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.9e-10 69.3 92 44.6
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.1e-06 58.9 232 24.6
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.8e-06 58.2 50 58.0


User provided reference genes

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