Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 6.1e-89 330.9 177 100.0
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 3.4e-87 325.1 178 98.9
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.2e-84 316.6 178 97.2
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.2e-84 316.6 178 97.2
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.2e-84 316.6 178 97.2
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.9e-82 309.3 179 93.9
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.2e-76 290.0 178 88.8
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 3.1e-72 275.4 174 87.4
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 3.9e-67 258.5 178 80.9
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 9.5e-66 253.8 179 79.9
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 2.4e-61 239.2 179 76.5
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.2e-54 216.1 172 68.6
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.0e-51 205.7 167 68.9
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 3.8e-46 188.7 116 80.2
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.9e-45 186.4 151 65.6
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-45 186.0 122 79.5
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.2e-45 185.3 114 80.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 4.2e-45 185.3 114 80.7
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.1e-44 183.0 114 80.7
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.1e-44 183.0 113 80.5
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.5e-44 182.2 112 81.2
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 6.0e-44 181.4 106 83.0
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 6.0e-44 181.4 109 83.5
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.0e-43 180.6 154 65.6
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 1.0e-43 180.6 109 83.5
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 1.0e-43 180.6 169 60.4
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.0e-43 180.6 114 78.9
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.3e-43 180.3 140 70.0
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.7e-43 179.9 109 83.5
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 2.3e-43 179.5 109 80.7
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 2.3e-43 179.5 109 78.9
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 3.0e-43 179.1 115 79.1
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.0e-43 179.1 109 82.6
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 3.0e-43 179.1 106 84.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.0e-43 179.1 106 82.1
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 5.1e-43 178.3 114 77.2
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 5.1e-43 178.3 114 77.2
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.1e-43 178.3 121 74.4
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.1e-43 178.3 137 72.3
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 6.6e-43 177.9 103 84.5
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 6.6e-43 177.9 140 69.3
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 6.6e-43 177.9 114 76.3
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 6.6e-43 177.9 119 76.5
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 8.7e-43 177.6 114 76.3
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 8.7e-43 177.6 99 87.9
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 8.7e-43 177.6 101 88.1
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 8.7e-43 177.6 137 68.6
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.1e-42 177.2 117 77.8
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.5e-42 176.8 118 78.8
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.5e-42 176.8 115 78.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.9e-42 176.4 109 78.9
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.9e-42 176.4 153 64.7
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.9e-42 176.4 106 83.0
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.5e-42 176.0 114 75.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.5e-42 176.0 114 75.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.5e-42 176.0 114 75.4
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 2.5e-42 176.0 109 81.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.5e-42 176.0 146 65.1
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 3.3e-42 175.6 144 65.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.3e-42 175.6 142 67.6
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 3.3e-42 175.6 137 68.6
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-42 175.3 106 78.3
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 4.3e-42 175.3 106 78.3
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 4.3e-42 175.3 130 70.0
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 4.3e-42 175.3 123 73.2
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 7.3e-42 174.5 114 76.3
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 7.3e-42 174.5 111 79.3
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 9.6e-42 174.1 110 77.3
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 9.6e-42 174.1 115 77.4
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 1.3e-41 173.7 145 62.8
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.6e-41 173.3 112 76.8
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.6e-41 173.3 158 61.4
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.6e-41 173.3 117 76.1
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.6e-41 173.3 144 66.0
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.6e-41 173.3 106 78.3
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 2.1e-41 172.9 177 57.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.1e-41 172.9 114 74.6
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.6e-41 172.2 161 59.6
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 4.8e-41 171.8 123 73.2
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 6.2e-41 171.4 166 61.4
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 6.2e-41 171.4 120 73.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 6.2e-41 171.4 111 79.3
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 8.1e-41 171.0 114 73.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 8.1e-41 171.0 109 78.0
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 8.1e-41 171.0 133 68.4
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.1e-40 170.6 118 72.9
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-40 170.2 106 77.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.8e-40 169.9 139 66.2
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.4e-40 169.5 122 72.1
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.0e-40 168.7 135 67.4
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 4.0e-40 168.7 171 59.6
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 5.3e-40 168.3 102 81.4
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.2e-39 167.2 113 71.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 5.8e-39 164.9 165 58.2
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 7.6e-39 164.5 143 61.5
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.7e-38 163.3 143 61.5
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 2.9e-38 162.5 102 76.5
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.9e-38 162.5 114 71.9
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.9e-38 162.5 157 57.3
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.4e-38 161.4 144 61.1
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 8.4e-38 161.0 114 71.9
BcaC02g10904 Brassica carinata HOM05D006938 ORTHO05D008600 1.0e-35 154.1 137 71.5
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 7.3e-34 147.9 107 67.3
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.3e-33 147.1 108 65.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 8.1e-33 144.4 112 61.6
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.8e-32 143.3 89 78.7
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 5.3e-32 141.7 143 53.8
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 1.6e-28 130.2 69 89.9
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.1e-28 129.8 112 54.5
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 4.6e-28 128.6 95 69.5
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 4.0e-24 115.5 63 92.1
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 7.9e-20 101.3 133 42.1
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.4e-16 90.5 54 81.5
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.9e-16 88.2 63 69.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 5.8e-15 85.1 44 90.9
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 1.0e-14 84.3 74 51.4
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.3e-11 73.9 44 77.3
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.1e-10 70.9 55 61.8


User provided reference genes

Program Settings