Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p14630 Brassica napus HOM05D015232 ORTHO05D015515 4.5e-40 167.5 89 100.0
C01p25310 Brassica napus HOM05D015232 ORTHO05D015515 2.2e-26 122.1 109 68.8
A10p07150 Brassica napus HOM05D015232 ORTHO05D015515 1.1e-25 119.8 109 67.9
C08p16110 Brassica napus HOM05D015232 ORTHO05D015515 3.0e-20 101.7 92 60.9
BolC8t49233H Brassica oleracea HOM05D015232 ORTHO05D015515 4.4e-19 97.8 92 59.8
BcaC09g50448 Brassica carinata HOM05D015232 ORTHO05D015515 3.7e-18 94.7 96 64.6
BolC1t02481H Brassica oleracea HOM05D003829 ORTHO05D015515 5.9e-16 87.4 104 54.8
C03p44940 Brassica napus HOM05D015232 ORTHO05D015515 1.7e-15 85.9 83 56.6
A03p61070 Brassica napus HOM05D003829 ORTHO05D028154 6.1e-13 77.4 56 75.0
BraA03t15147Z Brassica rapa HOM05D040596 ORTHO05D028154 1.2e-11 73.2 47 83.0
BolC5t30108H Brassica oleracea HOM05D003829 ORTHO05D028154 2.8e-10 68.6 47 89.4
BraA05t20393Z Brassica rapa HOM05D015232 ORTHO05D015515 5.4e-09 64.3 29 96.6
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 9.2e-09 63.5 47 66.0
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.6e-08 62.8 55 63.6
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 1.6e-08 62.8 47 61.7
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
Haze_18553 Corylus avellana HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
Haze_25313 Corylus avellana HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 63.8
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 63.8
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 2.0e-08 62.4 50 64.0
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 2.0e-08 62.4 47 66.0
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 2.7e-08 62.0 47 63.8
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 2.7e-08 62.0 47 61.7
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 3.5e-08 61.6 47 61.7
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 3.5e-08 61.6 47 63.8
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 3.5e-08 61.6 47 61.7
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 3.5e-08 61.6 47 63.8
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 4.5e-08 61.2 47 61.7
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 4.5e-08 61.2 47 61.7
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 4.5e-08 61.2 47 61.7
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 5.9e-08 60.8 47 61.7
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 7.8e-08 60.5 72 50.0
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.0e-07 60.1 46 63.0
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 1.3e-07 59.7 47 63.8
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 1.7e-07 59.3 47 63.8
Migut.L00154 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.7e-07 59.3 47 59.6
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.7e-07 59.3 47 59.6
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.7e-07 59.3 47 59.6
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 1.7e-07 59.3 47 61.7
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 1.7e-07 59.3 48 64.6
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 68.1
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 2.3e-07 58.9 51 54.9
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 61.7
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 66.0
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 59.6
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 59.6
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 59.6
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 59.6
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 68.1
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 2.3e-07 58.9 47 61.7
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 3.9e-07 58.2 47 66.0
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 3.9e-07 58.2 47 72.3
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 3.9e-07 58.2 47 66.0
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 5.0e-07 57.8 59 55.9
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 5.0e-07 57.8 48 62.5
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 5.0e-07 57.8 48 60.4
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 63.8
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 66.0
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 5.0e-07 57.8 55 56.4
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 66.0
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 66.0
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 66.0
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 5.0e-07 57.8 46 63.0
TPR.G25992 Trifolium pratense HOM05D003829 ORTHO05D015515 5.0e-07 57.8 47 63.8
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 5.0e-07 57.8 47 66.0
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 6.6e-07 57.4 42 64.3
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 6.6e-07 57.4 47 63.8
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 6.6e-07 57.4 47 63.8
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 6.6e-07 57.4 46 67.4
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 6.6e-07 57.4 47 59.6
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.6e-07 57.4 46 63.0
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 6.6e-07 57.4 46 63.0
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 8.6e-07 57.0 47 63.8
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 8.6e-07 57.0 51 54.9
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 8.6e-07 57.0 46 60.9
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 8.6e-07 57.0 46 60.9
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 8.6e-07 57.0 47 59.6
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 8.6e-07 57.0 47 61.7
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 1.1e-06 56.6 48 60.4
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 1.1e-06 56.6 47 63.8
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.5e-06 56.2 47 61.7
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 1.5e-06 56.2 47 61.7
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 1.5e-06 56.2 47 59.6
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 1.9e-06 55.8 47 61.7
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.9e-06 55.8 47 57.4
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 1.9e-06 55.8 47 63.8
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 1.9e-06 55.8 47 61.7
SEGI_31614 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 1.9e-06 55.8 48 58.3
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 2.5e-06 55.5 65 50.8
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 2.5e-06 55.5 47 61.7
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 3.3e-06 55.1 47 57.4
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 4.3e-06 54.7 48 58.3
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 4.3e-06 54.7 49 59.2
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 4.3e-06 54.7 49 57.1
SEGI_15169 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 4.3e-06 54.7 47 59.6
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 5.6e-06 54.3 47 61.7
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 5.6e-06 54.3 48 60.4
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 7.3e-06 53.9 47 59.6
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 9.5e-06 53.5 47 55.3
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 9.5e-06 53.5 50 54.0
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 9.5e-06 53.5 50 68.0


User provided reference genes

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