Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p13310 Brassica napus HOM05D009593 ORTHO05D011753 2.4e-37 158.3 78 100.0
C04p17060 Brassica napus HOM05D009593 ORTHO05D011753 2.2e-35 151.8 78 96.2
Thhalv10017495m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 1.2e-25 119.4 78 75.6
BcaB02g10457 Brassica carinata HOM05D009593 ORTHO05D011753 6.1e-25 117.1 78 76.9
CARHR126470 Cardamine hirsuta HOM05D009593 ORTHO05D011753 1.8e-21 105.5 78 66.7
BcaC01g05902 Brassica carinata HOM05D009593 ORTHO05D011753 2.3e-19 98.6 78 69.2
Carub.0004s1395 Capsella rubella HOM05D009593 ORTHO05D011753 2.6e-15 85.1 78 64.1
AL4G28020 Arabidopsis lyrata HOM05D009593 ORTHO05D011753 2.9e-14 81.6 70 62.9
BcaB01g03972 Brassica carinata HOM05D001608 ORTHO05D000411 5.4e-13 77.4 54 70.4
CARHR004530 Cardamine hirsuta HOM05D009593 ORTHO05D011753 2.3e-08 62.0 75 50.7
Aa31LG8G1890 Aethionema arabicum HOM05D009593 ORTHO05D011753 4.0e-08 61.2 77 46.8
BcaC05g24417 Brassica carinata HOM05D009593 ORTHO05D011753 8.9e-08 60.1 75 49.3
C05p03260 Brassica napus HOM05D009593 ORTHO05D011753 8.9e-08 60.1 75 49.3
BolC5t29107H Brassica oleracea HOM05D009593 ORTHO05D011753 8.9e-08 60.1 75 49.3
AT1G05065 Arabidopsis thaliana HOM05D009593 ORTHO05D011753 1.2e-07 59.7 77 50.6
BcaB02g06883 Brassica carinata HOM05D009593 ORTHO05D011753 2.6e-07 58.5 79 49.4
Thhalv10009388m.g Eutrema salsugineum HOM05D009593 ORTHO05D011753 2.6e-07 58.5 63 52.4
A10p03570 Brassica napus HOM05D009593 ORTHO05D011753 5.8e-07 57.4 75 49.3
BraA10t42634Z Brassica rapa HOM05D009593 ORTHO05D011753 5.8e-07 57.4 75 49.3
BraA09t42093Z Brassica rapa HOM05D009593 ORTHO05D011753 7.5e-07 57.0 67 55.2
Carub.0001s0434 Capsella rubella HOM05D009593 ORTHO05D011753 9.8e-07 56.6 80 46.2
BcaC07g42151 Brassica carinata HOM05D009593 ORTHO05D011753 1.7e-06 55.8 72 47.2
C08p51980 Brassica napus HOM05D009593 ORTHO05D011753 1.7e-06 55.8 72 47.2
BcaC07g42152 Brassica carinata HOM05D009593 ORTHO05D011753 2.2e-06 55.5 66 50.0
BcaC05g24415 Brassica carinata HOM05D009593 ORTHO05D011753 2.9e-06 55.1 71 45.1
A09p67610 Brassica napus HOM05D009593 ORTHO05D011753 8.3e-06 53.5 66 47.0


User provided reference genes

Program Settings