Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p12410 Brassica napus HOM05D041560 ORTHO05D003342 1.0e-46 189.9 109 100.0
C04p16040 Brassica napus HOM05D041560 ORTHO05D042746 2.7e-18 95.5 51 94.1
BcaC06g30921 Brassica carinata HOM05D000848 ORTHO05D018560 2.3e-09 65.9 43 67.4
AT5G28823 Arabidopsis thaliana HOM05D021876 ORTHO05D023643 2.5e-08 62.4 43 62.8
C02p51770 Brassica napus HOM05D000848 ORTHO05D003342 3.3e-08 62.0 43 62.8
C08p48880 Brassica napus HOM05D000848 ORTHO05D003342 3.3e-08 62.0 42 64.3
C08p23810 Brassica napus HOM05D000848 ORTHO05D003342 5.6e-08 61.2 43 65.1
BolC4t23177H Brassica oleracea HOM05D041560 ORTHO05D042746 7.3e-08 60.8 32 90.6
Sp7g06180 Schrenkiella parvula HOM05D000399 ORTHO05D000304 7.3e-08 60.8 97 37.1
BolC7t45760H Brassica oleracea HOM05D000848 ORTHO05D000007 9.5e-08 60.5 43 60.5
BolC5t31924H Brassica oleracea HOM05D015390 ORTHO05D018553 1.6e-07 59.7 42 64.3
BolC2t11262H Brassica oleracea HOM05D000848 ORTHO05D003342 2.1e-07 59.3 43 60.5
Thhalv10029298m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.1e-07 59.3 44 59.1
A02p32130 Brassica napus HOM05D000848 ORTHO05D020100 2.8e-07 58.9 43 53.5
A06p43830 Brassica napus HOM05D000848 ORTHO05D003342 2.8e-07 58.9 43 53.5
A08p18660 Brassica napus HOM05D008189 ORTHO05D020139 3.6e-07 58.5 42 54.8
BcaC01g06423 Brassica carinata HOM05D000848 ORTHO05D020139 4.7e-07 58.2 42 54.8
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 6.2e-07 57.8 42 54.8
CARHR183910 Cardamine hirsuta HOM05D000848 ORTHO05D000007 8.0e-07 57.4 43 58.1
Thhalv10009948m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.4e-06 56.6 42 57.1
Thhalv10019718m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.4e-06 56.6 42 64.3
C09p41410 Brassica napus HOM05D000848 ORTHO05D011438 1.8e-06 56.2 42 59.5
BolC9t57016H Brassica oleracea HOM05D000848 ORTHO05D011438 1.8e-06 56.2 42 59.5
A03p12850 Brassica napus HOM05D000848 ORTHO05D011438 2.3e-06 55.8 42 59.5
BolC4t22620H Brassica oleracea HOM05D000848 ORTHO05D011438 2.3e-06 55.8 42 59.5
BraA03t10593Z Brassica rapa HOM05D000848 ORTHO05D011438 2.3e-06 55.8 42 59.5
C09p24120 Brassica napus HOM05D000848 ORTHO05D018553 3.1e-06 55.5 42 57.1
Thhalv10026798m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 4.0e-06 55.1 42 64.3
A03p29750 Brassica napus HOM05D000848 ORTHO05D003342 6.8e-06 54.3 42 61.9
C04p18710 Brassica napus HOM05D000848 ORTHO05D003342 6.8e-06 54.3 42 61.9
C04p18840 Brassica napus HOM05D000848 ORTHO05D003342 6.8e-06 54.3 42 61.9
BolC3t18271H Brassica oleracea HOM05D000848 ORTHO05D022013 6.8e-06 54.3 42 54.8
Thhalv10029505m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 6.8e-06 54.3 42 61.9
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 8.9e-06 53.9 42 54.8
Carub.0007s3131 Capsella rubella HOM05D000848 ORTHO05D003342 8.9e-06 53.9 42 59.5


User provided reference genes

Program Settings