Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p10860 Brassica napus HOM05D021045 ORTHO05D027803 7.4e-228 793.5 392 100.0
BraA05t20031Z Brassica rapa HOM05D021045 ORTHO05D027803 7.6e-225 783.5 392 98.7
BolC4t26329H Brassica oleracea HOM05D021045 ORTHO05D027803 2.0e-79 300.4 178 86.0
BcaC08g45924 Brassica carinata HOM05D021045 ORTHO05D027803 5.4e-61 239.2 359 47.6
BcaC02g07321 Brassica carinata HOM05D008872 ORTHO05D011322 1.5e-55 221.1 254 54.3
BcaNung03192 Brassica carinata HOM05D013189 ORTHO05D032411 1.8e-48 197.6 327 41.6
C07p53080 Brassica napus HOM05D013189 ORTHO05D032411 1.4e-45 188.0 218 50.5
BNapus_Darmor_BZH_scaffold_229p00090 Brassica napus HOM05D008872 ORTHO05D011322 8.3e-38 162.2 269 43.1
A07p34770 Brassica napus HOM05D008872 ORTHO05D011322 2.4e-37 160.6 271 42.8
C03p76320 Brassica napus HOM05D008872 ORTHO05D011322 1.5e-31 141.4 260 41.2
BolC3t19888H Brassica oleracea HOM05D021045 ORTHO05D011322 5.8e-31 139.4 162 49.4
BcaB04g20432 Brassica carinata HOM05D008872 ORTHO05D011322 3.0e-27 127.1 179 48.0
BcaC07g37406 Brassica carinata HOM05D006751 ORTHO05D008710 3.0e-27 127.1 211 42.2
BcaC07g41036 Brassica carinata HOM05D013189 ORTHO05D023891 8.6e-27 125.6 217 41.0
C08p40390 Brassica napus HOM05D013189 ORTHO05D023891 8.6e-27 125.6 217 41.0
C08p22310 Brassica napus HOM05D009579 ORTHO05D019922 8.1e-25 119.0 227 38.3
BcaC08g45935 Brassica carinata HOM05D008872 ORTHO05D039599 2.4e-24 117.5 256 36.7
C06p37330 Brassica napus HOM05D008872 ORTHO05D039599 2.4e-24 117.5 256 36.7
BcaC03g16816 Brassica carinata HOM05D008872 ORTHO05D011322 1.2e-23 115.2 354 33.3
C09p48550 Brassica napus HOM05D009579 ORTHO05D019922 1.2e-23 115.2 234 37.6
C02p46890 Brassica napus HOM05D008872 ORTHO05D032322 4.9e-22 109.8 255 34.5
BolC3t19826H Brassica oleracea HOM05D008872 ORTHO05D032322 4.9e-22 109.8 256 35.2
BcaC04g20042 Brassica carinata HOM05D007210 ORTHO05D019922 1.4e-21 108.2 194 40.7
A04p33340 Brassica napus HOM05D000073 ORTHO05D000033 6.6e-19 99.4 198 38.9
C07p42690 Brassica napus HOM05D008872 ORTHO05D011322 3.1e-16 90.5 186 38.2
BcaC01g00092 Brassica carinata HOM05D008872 ORTHO05D032322 8.4e-14 82.4 258 32.2
C08p08820 Brassica napus HOM05D013189 ORTHO05D023891 4.2e-13 80.1 172 37.2
BolC8t47728H Brassica oleracea HOM05D013189 ORTHO05D023891 4.2e-13 80.1 172 37.2
BcaB07g33975 Brassica carinata HOM05D013189 ORTHO05D027648 7.1e-13 79.3 145 38.6
BolC7t44799H Brassica oleracea HOM05D008872 ORTHO05D011322 8.7e-11 72.4 138 39.9
BraA01t00019Z Brassica rapa HOM05D013189 ORTHO05D023891 1.9e-10 71.2 152 35.5
BcaC04g22210 Brassica carinata HOM05D008872 ORTHO05D011322 3.3e-10 70.5 233 32.2
C04p47290 Brassica napus HOM05D021045 ORTHO05D103798 3.3e-10 70.5 38 86.8
C01p52450 Brassica napus HOM05D013189 ORTHO05D103043 1.6e-09 68.2 74 45.9
BolC3t20471H Brassica oleracea HOM05D008872 ORTHO05D011322 6.2e-09 66.2 138 39.1
BcaB03g15850 Brassica carinata HOM05D009579 ORTHO05D021934 4.9e-06 56.6 71 45.1


User provided reference genes

Program Settings