Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p10390 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-91 338.2 171 100.0
C01p44800 Brassica napus HOM05D000313 ORTHO05D000065 6.2e-46 188.0 210 58.1
BcaC09g48884 Brassica carinata HOM05D010891 ORTHO05D014503 4.0e-21 105.5 66 84.8
C01p40820 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-17 94.0 126 48.4
BolC1t04039H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-17 93.2 110 52.7
BolC1t04448H Brassica oleracea HOM05D000313 ORTHO05D000065 6.7e-16 88.2 61 77.0
BcaC09g49253 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-15 86.7 61 75.4
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-08 62.0 59 54.2
A07p36100 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-08 62.0 59 54.2
BcaC03g13942 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 59 49.2
BcaC03g15391 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 59 49.2
BcaC06g35177 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-07 60.8 52 59.6
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.8 59 52.5
BolC7t42406H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.8 52 59.6
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.8 59 49.2
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-07 60.5 58 51.7
C01p21020 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-07 60.1 54 57.4
BcaC03g16635 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.7 59 47.5
C02p44680 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.7 59 47.5
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.7 59 54.2
BcaC07g36843 Brassica carinata HOM05D000313 ORTHO05D000065 3.3e-07 59.3 58 51.7
Thhalv10005644m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 3.3e-07 59.3 59 49.2
BcaC05g25841 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.9 59 50.8
A09p24570 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.9 54 57.4
BraA06t24916Z Brassica rapa HOM05D000313 ORTHO05D000065 4.3e-07 58.9 54 57.4
Thhalv10002234m.g Eutrema salsugineum HOM05D000313 ORTHO05D000065 4.3e-07 58.9 59 47.5
C04p06280 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.5 58 48.3
BcaB01g01178 Brassica carinata HOM05D000313 ORTHO05D000065 7.4e-07 58.2 59 52.5
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 7.4e-07 58.2 58 44.8
BolC9t57614H Brassica oleracea HOM05D000313 ORTHO05D000065 7.4e-07 58.2 50 62.0
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-07 57.8 53 56.6
BcaC01g04545 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-07 57.8 59 49.2
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-07 57.8 58 46.6
BcaC06g35179 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-07 57.8 35 88.6
BolC9t58587H Brassica oleracea HOM05D000313 ORTHO05D000065 9.7e-07 57.8 59 47.5
BcaC09g50772 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-06 57.4 54 55.6
BraA01t03105Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-06 57.4 56 55.4
BraA09t37856Z Brassica rapa HOM05D000313 ORTHO05D000065 1.3e-06 57.4 59 47.5
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.6 52 51.9
BolC2t09876H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-06 56.6 59 47.5
BcaC09g50771 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-06 56.2 51 56.9
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 2.8e-06 56.2 59 45.8
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.8 54 55.6
A02p31310 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.8 55 49.1
C03p49020 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.8 59 50.8
C06p05530 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.8 55 49.1
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 55.8 59 50.8
BolC5t29849H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 55.8 54 53.7
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 4.8e-06 55.5 52 51.9
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 4.8e-06 55.5 52 51.9
BcaC02g10550 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-06 55.1 52 51.9
BcaC05g25218 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-06 55.1 54 53.7
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-06 55.1 54 55.6
C08p08710 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-06 55.1 54 55.6
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 6.3e-06 55.1 52 51.9
BolC8t47721H Brassica oleracea HOM05D000313 ORTHO05D000065 6.3e-06 55.1 54 55.6


User provided reference genes

Program Settings