Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 3.3e-120 435.3 252 100.0
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 4.7e-119 431.4 252 94.0
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 8.7e-113 410.6 255 85.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 8.7e-113 410.6 253 87.4
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 8.7e-113 410.6 253 89.3
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 2.1e-111 406.0 255 83.9
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.5e-101 373.2 258 77.9
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 3.8e-100 368.6 255 76.9
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 9.3e-99 364.0 258 76.4
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 1.8e-97 359.8 255 75.3
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.6e-90 336.7 257 77.0
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.3e-89 332.8 180 89.4
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 1.1e-88 330.5 258 76.0
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.1e-87 326.2 261 69.3
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 1.4e-86 323.6 253 66.4
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 4.0e-86 322.0 258 68.2
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 9.0e-86 320.9 254 67.7
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 2.0e-85 319.7 179 86.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 2.6e-85 319.3 253 67.6
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.4e-85 318.9 178 86.0
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 3.4e-85 318.9 254 66.1
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 4.5e-85 318.5 178 85.4
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 7.6e-85 317.8 180 85.0
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.6e-85 317.8 180 85.6
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.0e-84 317.4 178 86.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.0e-84 317.4 178 86.5
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 2.2e-84 316.2 178 84.8
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.2e-84 316.2 179 84.4
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 2.9e-84 315.8 180 85.0
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 2.9e-84 315.8 178 84.3
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 3.8e-84 315.5 265 64.9
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.1e-83 313.9 211 74.4
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.5e-83 312.8 180 85.0
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 3.2e-83 312.4 181 85.1
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 7.1e-83 311.2 178 83.1
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 7.1e-83 311.2 179 83.2
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 7.1e-83 311.2 180 82.8
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 7.1e-83 311.2 180 82.8
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 9.3e-83 310.8 178 83.1
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 2.1e-82 309.7 180 82.8
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 3.5e-82 308.9 178 84.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 7.9e-82 307.8 195 79.0
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 1.3e-81 307.0 261 62.8
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 1.8e-81 306.6 256 64.1
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 1.8e-81 306.6 177 84.2
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.8e-81 306.6 259 66.0
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 2.3e-81 306.2 178 82.6
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 2.3e-81 306.2 178 82.0
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 3.0e-81 305.8 180 83.9
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.9e-81 305.4 256 66.0
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 3.9e-81 305.4 179 82.7
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 3.9e-81 305.4 179 82.7
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 5.1e-81 305.1 257 63.4
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.5e-80 303.5 178 82.0
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 3.3e-80 302.4 178 79.8
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 3.3e-80 302.4 177 83.6
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 4.3e-80 302.0 179 82.7
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 2.8e-79 299.3 177 83.1
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 3.7e-79 298.9 177 83.6
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 6.3e-79 298.1 260 62.7
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 8.2e-79 297.7 177 82.5
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 1.1e-78 297.4 182 80.2
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 1.4e-78 297.0 179 82.1
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.1e-78 295.8 208 73.1
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 5.3e-78 295.0 188 77.7
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 5.3e-78 295.0 178 80.3
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 1.3e-76 290.4 177 79.1
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 3.8e-76 288.9 178 78.1
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 5.0e-76 288.5 176 81.2
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 8.5e-76 287.7 182 76.9
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 1.9e-75 286.6 157 86.6
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.9e-75 286.6 177 78.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 7.2e-75 284.6 179 78.8
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 8.8e-73 277.7 178 78.7
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-72 276.6 179 73.7
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 3.3e-72 275.8 180 73.3
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 6.3e-71 271.6 172 77.3
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 1.1e-70 270.8 153 84.3
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.1e-70 268.9 143 88.8
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 6.9e-70 268.1 272 57.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 4.7e-66 255.4 180 71.7
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 7.9e-66 254.6 178 69.7
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.3e-65 253.1 175 69.7
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 3.9e-65 252.3 178 70.8
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 5.1e-65 251.9 201 62.7
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 2.8e-63 246.1 178 70.2
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 1.8e-62 243.4 179 69.3
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 8.8e-57 224.6 123 87.8
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 5.7e-56 221.9 118 89.0
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 5.7e-56 221.9 118 89.0
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 7.4e-56 221.5 149 75.2
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 2.6e-48 196.4 120 77.5
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 2.7e-45 186.4 180 55.0
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 3.8e-44 182.6 145 65.5
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.6e-42 177.2 97 84.5
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 1.2e-40 171.0 94 83.0
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 2.3e-33 146.7 129 60.5
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 7.0e-30 135.2 75 84.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.2e-26 124.4 65 89.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.0e-20 102.4 56 87.5
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 4.3e-11 72.8 53 66.0


User provided reference genes

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