Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 1.2e-118 429.9 227 100.0
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 4.7e-118 427.9 227 99.6
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 5.2e-117 424.5 227 98.2
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 5.2e-117 424.5 227 98.2
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 3.9e-112 408.3 228 95.2
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 1.2e-108 396.7 227 91.6
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.9e-106 389.4 227 89.0
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 3.3e-103 378.6 227 87.2
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 2.8e-102 375.6 227 87.7
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 6.2e-102 374.4 227 87.2
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 8.1e-102 374.0 227 86.8
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.8e-101 372.9 227 86.8
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 8.9e-101 370.5 227 86.3
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 3.4e-100 368.6 227 85.5
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 4.9e-99 364.8 227 84.1
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 1.1e-98 363.6 231 82.7
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 2.3e-96 355.9 227 83.7
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 1.3e-91 340.1 230 77.8
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.5e-84 316.6 221 73.3
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.5e-84 316.6 221 73.3
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 2.0e-84 316.2 221 72.9
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 2.2e-83 312.8 224 70.5
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 1.1e-82 310.5 223 70.0
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 1.9e-82 309.7 225 69.8
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 5.4e-82 308.1 223 69.1
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 1.6e-81 306.6 163 96.9
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 1.6e-81 306.6 226 68.6
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 3.5e-81 305.4 226 69.0
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 4.6e-81 305.1 223 69.1
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 1.9e-79 299.7 227 68.3
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 7.4e-79 297.7 220 67.3
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 9.6e-79 297.4 225 67.1
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 1.3e-78 297.0 228 67.1
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 1.3e-78 297.0 227 66.1
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 1.6e-78 296.6 223 66.4
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 2.1e-78 296.2 221 65.6
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 4.8e-78 295.0 232 64.2
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.4e-77 293.5 230 65.7
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 1.8e-77 293.1 226 65.9
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.1e-77 292.4 220 67.3
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 3.1e-77 292.4 221 67.0
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 4.0e-77 292.0 219 66.7
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 4.0e-77 292.0 219 64.8
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 9.0e-77 290.8 219 64.4
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.2e-76 290.4 221 64.7
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 2.0e-76 289.7 223 65.0
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.0e-75 287.3 227 64.8
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 3.8e-75 285.4 224 63.4
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 4.9e-75 285.0 220 67.3
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 1.1e-74 283.9 225 65.8
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 1.4e-74 283.5 220 65.9
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 3.2e-74 282.3 228 64.0
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 3.2e-74 282.3 228 61.8
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 4.2e-74 282.0 232 61.6
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 4.2e-74 282.0 230 62.2
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 5.5e-74 281.6 228 63.2
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 5.5e-74 281.6 224 63.8
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 7.1e-74 281.2 222 61.3
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 9.3e-74 280.8 224 63.4
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 9.3e-74 280.8 225 61.3
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.6e-73 280.0 220 63.6
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 4.6e-73 278.5 239 59.4
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 4.6e-73 278.5 216 63.9
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 6.0e-73 278.1 222 61.7
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 1.3e-72 276.9 232 62.9
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 3.9e-72 275.4 222 60.8
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 1.5e-71 273.5 221 62.0
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 5.7e-71 271.6 238 58.0
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 7.4e-71 271.2 210 63.8
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 9.6e-71 270.8 238 58.4
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.1e-70 269.6 221 63.8
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 2.8e-70 269.2 234 61.5
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 2.8e-70 269.2 220 59.5
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 2.8e-70 269.2 220 59.5
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 3.7e-70 268.9 238 58.4
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 4.8e-70 268.5 221 61.1
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 8.2e-70 267.7 231 58.9
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 1.1e-69 267.3 236 57.6
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 1.4e-69 266.9 229 61.1
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 2.4e-69 266.2 221 61.1
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 5.3e-69 265.0 221 60.6
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 6.9e-69 264.6 227 59.5
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 6.9e-69 264.6 224 60.3
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 6.9e-69 264.6 221 62.9
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 2.6e-68 262.7 228 59.6
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 3.4e-68 262.3 224 60.7
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 7.6e-68 261.2 229 61.1
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 7.6e-68 261.2 221 61.1
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 1.3e-67 260.4 218 60.1
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 1.3e-67 260.4 222 62.6
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 5.0e-67 258.5 221 60.6
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 1.1e-66 257.3 218 60.1
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 7.1e-66 254.6 215 60.9
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 9.3e-66 254.2 224 58.5
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.2e-65 253.8 222 60.4
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 1.6e-65 253.4 222 59.9
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 3.5e-65 252.3 219 61.2
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 7.9e-65 251.1 186 64.0
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 1.8e-64 250.0 234 54.7
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 3.9e-64 248.8 218 56.0
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 6.7e-64 248.1 274 51.1
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 1.1e-63 247.3 261 52.9
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 1.1e-63 247.3 223 59.2
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 1.5e-63 246.9 231 53.2
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 1.9e-63 246.5 234 57.3
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 2.5e-63 246.1 232 53.4
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 6.9e-61 238.0 220 55.9
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 2.9e-59 232.6 224 54.0
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 2.9e-59 232.6 216 52.8
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 3.8e-59 232.3 214 56.5
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 6.5e-59 231.5 229 52.8
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 1.4e-56 223.8 218 54.1
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.3e-56 223.0 246 48.4
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 6.7e-56 221.5 185 71.4
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 6.7e-56 221.5 163 66.9
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.3e-54 217.2 218 53.7
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 1.4e-53 213.8 241 47.3
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 4.5e-52 208.8 222 52.3
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 2.9e-51 206.1 161 65.2
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 6.5e-51 204.9 169 60.4
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 4.2e-50 202.2 172 58.7
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 2.7e-49 199.5 221 48.0
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 7.9e-49 198.0 176 58.0
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 2.2e-46 189.9 162 61.7
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.2e-46 189.9 141 69.5
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 4.8e-46 188.7 145 66.2
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 1.4e-45 187.2 154 61.7
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 2.4e-45 186.4 221 49.8
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 2.0e-39 166.8 204 48.5
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 3.3e-39 166.0 221 43.4
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 3.7e-38 162.5 222 42.3
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 1.4e-37 160.6 219 42.5
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 4.5e-36 155.6 187 46.0
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 2.2e-35 153.3 233 41.2
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 5.0e-35 152.1 193 44.0
BcaB06g28959 Brassica carinata HOM05D003667 ORTHO05D004397 1.1e-34 151.0 226 46.5
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 1.6e-33 147.1 115 63.5
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 6.1e-33 145.2 204 49.5
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 6.1e-33 145.2 204 49.5
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 6.1e-33 145.2 116 62.9
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 8.0e-33 144.8 115 62.6
Dinv25059 Davidia involucrata HOM05D003667 ORTHO05D004397 8.0e-33 144.8 144 52.1
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 3.4e-31 139.4 218 35.3
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 9.8e-31 137.9 191 41.4
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 3.1e-29 132.9 141 50.4
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 9.1e-29 131.3 126 53.2
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 2.0e-28 130.2 144 50.0
BNapus_Darmor_BZH_scaffold_271p00010 Brassica napus HOM05D003667 ORTHO05D004397 3.5e-28 129.4 190 48.4
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 1.0e-27 127.9 217 34.1
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 2.6e-23 113.2 90 62.2
AagrBONN_evm.TU.Sc2ySwM_368.3326 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.2e-22 110.2 181 38.1
BolC4t28047H Brassica oleracea HOM05D003667 ORTHO05D004397 2.7e-20 103.2 53 98.1
CBR_g20321 Chara braunii HOM05D003667 ORTHO05D004397 5.9e-20 102.1 98 53.1
BraA04t18306Z Brassica rapa HOM05D003667 ORTHO05D004397 1.7e-19 100.5 52 96.2
A04p28220 Brassica napus HOM05D003667 ORTHO05D004397 2.3e-19 100.1 53 96.2
C04p65580 Brassica napus HOM05D003667 ORTHO05D004397 2.3e-19 100.1 53 96.2
Glyma.02G282800 Glycine max HOM05D003667 ORTHO05D004397 2.3e-19 100.1 116 51.7
arahy.Tifrunner.gnm1.ann1.K13S6W Arachis hypogaea HOM05D004599 ORTHO05D005564 1.5e-18 97.4 137 41.6
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 2.5e-18 96.7 174 40.2
Rhsim02G0194700 Rhododendron simsii HOM05D003667 ORTHO05D004397 4.3e-18 95.9 79 63.3
Rhsim02G0195800 Rhododendron simsii HOM05D003667 ORTHO05D004397 4.3e-18 95.9 79 63.3
arahy.Tifrunner.gnm1.ann1.835HL2 Arachis hypogaea HOM05D004313 ORTHO05D004397 9.5e-18 94.7 87 56.3
CAN.G1036.8 Capsicum annuum HOM05D003667 ORTHO05D004397 1.6e-17 94.0 156 36.5
CSS0038188 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 6.1e-17 92.0 77 59.7
Actinidia37807 Actinidia chinensis HOM05D003667 ORTHO05D004397 1.4e-16 90.9 171 36.3
FAN16G1288 Fragaria x ananassa HOM05D003667 ORTHO05D004397 5.2e-16 89.0 58 74.1
arahy.Tifrunner.gnm1.ann1.SS7A45 Arachis hypogaea HOM05D000726 ORTHO05D004397 2.0e-15 87.0 236 30.1
Nitab4.5_0002669g0010 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.6e-15 86.7 101 46.5
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 3.4e-15 86.3 70 57.1
TPR.G36075 Trifolium pratense HOM05D003667 ORTHO05D004397 1.1e-13 81.3 53 73.6
arahy.Tifrunner.gnm1.ann1.SJAT5A Arachis hypogaea HOM05D003667 ORTHO05D003672 1.8e-13 80.5 148 36.5
AUR62033107 Chenopodium quinoa HOM05D003667 ORTHO05D004397 1.8e-13 80.5 75 61.3
Lalb_Chr10g0106511 Lupinus albus HOM05D003667 ORTHO05D004397 1.8e-13 80.5 77 54.5
arahy.Tifrunner.gnm1.ann1.X6I371 Arachis hypogaea HOM05D003667 ORTHO05D004397 3.2e-13 79.7 75 54.7
Ah.08g213170 Amaranthus hybridus HOM05D003667 ORTHO05D004397 2.7e-12 76.6 80 45.0
Solyc05g040090.1 Solanum lycopersicum HOM05D003667 ORTHO05D004397 3.6e-09 66.2 89 42.7
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 1.0e-08 64.7 79 44.3
HanXRQChr04g0115761 Helianthus annuus HOM05D003667 ORTHO05D004397 5.2e-08 62.4 53 56.6
VMungo0720G0063 Vigna mungo HOM05D003667 ORTHO05D004397 1.5e-07 60.8 70 44.3
FvH4_3g32534 Fragaria vesca HOM05D003667 ORTHO05D004397 4.4e-07 59.3 55 58.2


User provided reference genes

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