Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p06500 Brassica napus HOM05D006983 ORTHO05D008942 1.2e-144 516.5 272 100.0
BraA05t19618Z Brassica rapa HOM05D006983 ORTHO05D008942 1.0e-143 513.5 272 99.3
C04p07590 Brassica napus HOM05D006983 ORTHO05D008942 3.9e-135 485.0 278 93.9
BcaC02g12125 Brassica carinata HOM05D006983 ORTHO05D008942 1.9e-134 482.6 278 93.5
BolC4t22375H Brassica oleracea HOM05D006983 ORTHO05D008942 6.9e-132 474.2 278 92.8
BcaB02g09071 Brassica carinata HOM05D006983 ORTHO05D008942 1.0e-122 443.7 287 85.0
Sp4g22230 Schrenkiella parvula HOM05D006983 ORTHO05D008942 4.2e-113 411.8 280 78.9
Thhalv10017044m.g Eutrema salsugineum HOM05D006983 ORTHO05D008942 6.7e-111 404.4 282 76.6
AT2G39920 Arabidopsis thaliana HOM05D006983 ORTHO05D008942 1.9e-105 386.3 281 75.8
AL4G37500 Arabidopsis lyrata HOM05D006983 ORTHO05D008942 1.6e-104 383.3 280 73.2
CARHR134840 Cardamine hirsuta HOM05D006983 ORTHO05D008942 2.4e-100 369.4 282 70.9
Carub.0004s2205 Capsella rubella HOM05D006983 ORTHO05D008942 5.3e-100 368.2 281 71.2
Aa31LG5G19700 Aethionema arabicum HOM05D006983 ORTHO05D008942 6.7e-87 324.7 298 61.1
THA.LOC104810069 Tarenaya hassleriana HOM05D006983 ORTHO05D008942 1.9e-65 253.4 298 54.7
Cpa.g.sc19.223 Carica papaya HOM05D006983 ORTHO05D008942 4.7e-56 222.2 307 43.0
TAR623G0945 Trochodendron aralioides HOM05D006983 ORTHO05D008942 1.7e-53 213.8 301 43.5
COL.COLO4_25671 Corchorus olitorius HOM05D006983 ORTHO05D008942 2.9e-53 213.0 293 44.0
Duzib114G0863 Durio zibethinus HOM05D006983 ORTHO05D008942 2.9e-53 213.0 306 43.5
Dinv20949 Davidia involucrata HOM05D006983 ORTHO05D008942 3.7e-53 212.6 306 43.1
Dinv20994 Davidia involucrata HOM05D006983 ORTHO05D008942 3.7e-53 212.6 306 43.1
TWI73G0069 Tripterygium wilfordii HOM05D006983 ORTHO05D008942 1.9e-52 210.3 303 42.9
Manes.10G018300 Manihot esculenta HOM05D006983 ORTHO05D008942 5.4e-52 208.8 298 44.3
Ciclev10033883m.g Citrus clementina HOM05D006983 ORTHO05D008942 1.7e-50 203.8 301 42.2
CiPaw.01G295300 Carya illinoinensis HOM05D006983 ORTHO05D008942 3.0e-50 203.0 301 44.9
Haze_17176 Corylus avellana HOM05D006983 ORTHO05D008942 3.9e-50 202.6 318 42.1
GSVIVG01016377001 Vitis vinifera HOM05D006983 ORTHO05D008942 1.1e-49 201.1 300 42.3
Prupe.2G245400 Prunus persica HOM05D006983 ORTHO05D008942 1.9e-49 200.3 299 42.1
RcHm_v2.0_Chr1g0369271 Rosa chinensis HOM05D006983 ORTHO05D008942 4.3e-49 199.1 301 43.2
Thecc.10G027200 Theobroma cacao HOM05D006983 ORTHO05D008942 9.5e-49 198.0 305 42.6
Gohir.A05G346200 Gossypium hirsutum HOM05D006983 ORTHO05D008942 2.1e-48 196.8 309 41.4
Gorai.012G075200 Gossypium raimondii HOM05D006983 ORTHO05D008942 2.1e-48 196.8 309 41.7
Duzib106G0752 Durio zibethinus HOM05D006983 ORTHO05D008942 6.2e-48 195.3 308 41.6
FvH4_7g23940 Fragaria vesca HOM05D006983 ORTHO05D008942 6.2e-48 195.3 303 41.6
Atru.chr12.252 Acer truncatum HOM05D006983 ORTHO05D008942 8.1e-48 194.9 301 41.5
FAN10G1282 Fragaria x ananassa HOM05D006983 ORTHO05D008942 8.1e-48 194.9 303 41.9
FAN06G2291 Fragaria x ananassa HOM05D006983 ORTHO05D008942 1.4e-47 194.1 303 41.3
FAN01G0283 Fragaria x ananassa HOM05D006983 ORTHO05D008942 1.8e-47 193.7 303 41.3
Potri.010G193500 Populus trichocarpa HOM05D006983 ORTHO05D008942 1.8e-47 193.7 301 41.9
FAN03G3227 Fragaria x ananassa HOM05D006983 ORTHO05D008942 2.0e-46 190.3 304 41.1
MBI05_g03441_MAGBIO Magnolia biondii HOM05D006983 ORTHO05D008942 2.0e-46 190.3 299 39.5
QL08p062549 Quercus lobata HOM05D006983 ORTHO05D008942 2.6e-46 189.9 305 42.6
vmacro07000 Vaccinium macrocarpon HOM05D006983 ORTHO05D008942 5.8e-46 188.7 303 40.3
PGR142G1076 Punica granatum HOM05D006983 ORTHO05D008942 6.4e-45 185.3 300 41.3
Gohir.A10G228900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 8.3e-45 184.9 288 43.8
Psat5g127360 Pisum sativum HOM05D006983 ORTHO05D008942 3.2e-44 183.0 268 42.2
TPR.G29801 Trifolium pratense HOM05D006983 ORTHO05D008942 9.2e-44 181.4 280 39.6
MELO3C025147.2 Cucumis melo HOM05D006983 ORTHO05D008942 3.5e-43 179.5 298 38.9
Gorai.011G279300 Gossypium raimondii HOM05D006983 ORTHO05D008942 3.5e-43 179.5 288 42.0
Gohir.D10G242900 Gossypium hirsutum HOM05D006983 ORTHO05D008942 6.0e-43 178.7 288 41.7
Rhsim03G0139600 Rhododendron simsii HOM05D006983 ORTHO05D008942 6.0e-43 178.7 303 38.9
Sabra10G0149000 Salix brachista HOM05D006983 ORTHO05D008942 1.3e-42 177.6 334 37.7
Migut.F00708 Erythranthe guttata HOM05D006983 ORTHO05D008942 2.3e-42 176.8 291 36.4
MD07G1213100 Malus domestica HOM05D006983 ORTHO05D008942 2.3e-42 176.8 301 39.5
Nitab4.5_0012179g0010 Nicotiana tabacum HOM05D006983 ORTHO05D007189 2.3e-42 176.8 302 36.8
Gohir.D04G066400 Gossypium hirsutum HOM05D006983 ORTHO05D008942 3.9e-42 176.0 328 38.1
Medtr3g070090 Medicago truncatula HOM05D006983 ORTHO05D008942 3.9e-42 176.0 297 37.7
CsaV3_5G008850 Cucumis sativus L. HOM05D006983 ORTHO05D008942 8.6e-42 174.9 297 38.4
Hma1.2p1_0710F.1_g207380 Hydrangea macrophylla HOM05D006983 ORTHO05D008942 1.9e-41 173.7 302 38.4
Sc10g0002160 Simmondsia chinensis HOM05D006983 ORTHO05D008942 3.3e-41 172.9 292 40.1
Ca_05926_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 7.3e-41 171.8 300 37.3
Lj6g0016213 Lotus japonicus HOM05D006983 ORTHO05D008942 1.6e-40 170.6 281 40.2
ClCG07G003900 Citrullus lanatus HOM05D006983 ORTHO05D008942 2.1e-40 170.2 272 39.0
Eucgr.G03025 Eucalyptus grandis HOM05D006983 ORTHO05D008942 2.8e-40 169.9 297 37.4
Phvul.001G240100 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 2.8e-40 169.9 293 38.6
Cc02_g06970 Coffea canephora HOM05D006983 ORTHO05D008942 1.1e-39 167.9 295 39.0
Glyma.11G226700 Glycine max HOM05D006983 ORTHO05D008942 1.1e-39 167.9 280 38.6
Glyma.02G253900 Glycine max HOM05D006983 ORTHO05D008942 1.4e-39 167.5 292 37.7
ECA233G0306 Erigeron canadensis HOM05D006983 ORTHO05D008942 1.8e-39 167.2 291 38.5
DCAR_024839 Daucus carota HOM05D006983 ORTHO05D008942 2.3e-39 166.8 292 39.7
Glyma.18G030500 Glycine max HOM05D006983 ORTHO05D008942 3.1e-39 166.4 280 38.6
VMungo1383G1034 Vigna mungo HOM05D006983 ORTHO05D008942 5.2e-39 165.6 293 38.2
ECA238G4046 Erigeron canadensis HOM05D006983 ORTHO05D008942 6.8e-39 165.2 285 38.6
HanXRQChr14g0458841 Helianthus annuus HOM05D006983 ORTHO05D008942 2.0e-38 163.7 308 36.4
Medtr5g081740 Medicago truncatula HOM05D006983 ORTHO05D008942 4.4e-38 162.5 290 37.2
SalBow5G0486 Salvia bowleyana HOM05D006983 ORTHO05D008942 4.4e-38 162.5 298 36.9
Nn2g15918 Nelumbo nucifera HOM05D006983 ORTHO05D008942 7.6e-38 161.8 297 38.0
Nitab4.5_0000278g0220 Nicotiana tabacum HOM05D006983 ORTHO05D007189 9.9e-38 161.4 306 35.3
HanXRQChr12g0369331 Helianthus annuus HOM05D006983 ORTHO05D008942 1.7e-37 160.6 290 38.3
Lsat_1_v5_gn_2_120641 Lactuca sativa HOM05D006983 ORTHO05D008942 2.2e-37 160.2 313 37.7
Lj1A949T61 Lonicera japonica HOM05D006983 ORTHO05D008942 2.9e-37 159.8 242 40.5
arahy.Tifrunner.gnm1.ann1.A3NAV6 Arachis hypogaea HOM05D006983 ORTHO05D008942 4.9e-37 159.1 291 38.1
PSO339G3533 Papaver somniferum HOM05D006983 ORTHO05D008942 4.9e-37 159.1 303 38.0
VMungo0647G1533 Vigna mungo HOM05D006983 ORTHO05D008942 4.9e-37 159.1 302 36.4
arahy.Tifrunner.gnm1.ann1.6C4W0P Arachis hypogaea HOM05D006983 ORTHO05D008942 1.1e-36 157.9 279 36.6
Sed0026510 Sechium edule HOM05D006983 ORTHO05D008942 1.1e-36 157.9 236 41.1
ATR0618G335 Amborella trichopoda HOM05D006983 ORTHO05D008942 1.4e-36 157.5 302 38.4
Glyma.14G062600 Glycine max HOM05D006983 ORTHO05D008942 3.2e-36 156.4 276 37.7
arahy.Tifrunner.gnm1.ann1.IY3N90 Arachis hypogaea HOM05D006983 ORTHO05D008942 9.2e-36 154.8 279 36.6
Phvul.008G227000 Phaseolus vulgaris HOM05D006983 ORTHO05D008942 4.6e-35 152.5 276 37.0
Lalb_Chr10g0104981 Lupinus albus HOM05D006983 ORTHO05D008942 7.8e-35 151.8 295 35.3
PSO384G2074 Papaver somniferum HOM05D006983 ORTHO05D008942 7.8e-35 151.8 286 36.7
Ca_17141_v3 Cicer arietinum L. HOM05D006983 ORTHO05D008942 1.0e-34 151.4 234 40.2
LjContig00357g0002291 Lotus japonicus HOM05D006983 ORTHO05D008942 5.1e-34 149.1 275 34.5
Actinidia29673 Actinidia chinensis HOM05D006983 ORTHO05D008942 1.1e-33 147.9 248 38.3
HPP92_015339 Vanilla planifolia HOM05D006983 ORTHO05D008942 1.9e-33 147.1 301 33.9
CSS0012253 Camellia sinensis var. sinensis HOM05D006983 ORTHO05D008942 8.1e-32 141.7 155 49.7
arahy.Tifrunner.gnm1.ann1.10ZGUJ Arachis hypogaea HOM05D006983 ORTHO05D008942 2.0e-30 137.1 269 37.2
HanXRQChr07g0202311 Helianthus annuus HOM05D006983 ORTHO05D008942 7.6e-30 135.2 275 33.8
CSS0014435 Camellia sinensis var. sinensis HOM05D006983 ORTHO05D008942 6.4e-29 132.1 141 48.2
MD01G1146200 Malus domestica HOM05D006983 ORTHO05D008942 2.4e-28 130.2 162 45.7
DCAR_011784 Daucus carota HOM05D003187 ORTHO05D003630 2.7e-27 126.7 224 37.1
Psat2g036160 Pisum sativum HOM05D006983 ORTHO05D008942 5.1e-26 122.5 161 44.1
Medtr7g092870 Medicago truncatula HOM05D006983 ORTHO05D008942 8.7e-26 121.7 145 48.3
TPR.G40054 Trifolium pratense HOM05D006983 ORTHO05D008942 6.9e-23 112.1 139 45.3
Nn2g13598 Nelumbo nucifera HOM05D006983 ORTHO05D008942 5.6e-17 92.4 224 29.9
BcaB06g26858 Brassica carinata HOM05D006983 ORTHO05D008942 4.8e-16 89.4 77 64.9
Pp3c5_13290 Physcomitrium patens HOM05D000647 ORTHO05D000485 4.0e-15 86.3 305 28.2
Dinv20946 Davidia involucrata HOM05D006983 ORTHO05D008942 5.3e-15 85.9 78 60.3
Dinv20997 Davidia involucrata HOM05D006983 ORTHO05D008942 5.3e-15 85.9 78 60.3
Mapoly0028s0005 Marchantia polymorpha HOM05D000647 ORTHO05D000485 6.4e-13 79.0 304 25.0
Pp3c4_27860 Physcomitrium patens HOM05D000647 ORTHO05D000485 1.4e-12 77.8 309 24.3
Oeu006657.1 Olea europaea HOM05D006983 ORTHO05D008942 6.0e-11 72.4 69 59.4
Pp3c26_14760 Physcomitrium patens HOM05D000647 ORTHO05D000485 1.3e-10 71.2 309 23.9
AagrBONN_evm.TU.Sc2ySwM_344.3268 Anthoceros agrestis HOM05D000647 ORTHO05D000485 2.3e-10 70.5 290 26.2
SEGI_37087 Sequoiadendron giganteum HOM05D000647 ORTHO05D000485 4.3e-09 66.2 213 30.0
Pp3c16_1470 Physcomitrium patens HOM05D000647 ORTHO05D000485 6.2e-08 62.4 292 25.7
GSVIVG01028404001 Vitis vinifera HOM05D000647 ORTHO05D000485 1.2e-06 58.2 248 22.6
MD01G1146100 Malus domestica HOM05D006983 ORTHO05D008942 2.6e-06 57.0 106 34.0
SEGI_39694 Sequoiadendron giganteum HOM05D000647 ORTHO05D000485 2.6e-06 57.0 218 26.1
vmacro18844 Vaccinium macrocarpon HOM05D000647 ORTHO05D000485 7.6e-06 55.5 203 26.1


User provided reference genes

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