Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 1.0e-162 576.6 277 100.0
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 3.3e-158 561.6 277 97.1
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 3.1e-156 555.1 277 96.8
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.7e-149 532.7 278 92.8
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 8.8e-143 510.4 251 96.8
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 6.3e-141 504.2 267 91.8
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.2e-134 483.4 276 83.7
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 1.5e-134 483.0 277 83.8
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.2e-133 479.2 276 81.2
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.8e-130 468.4 276 78.6
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 2.9e-125 452.2 276 77.2
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 9.5e-113 410.6 266 72.6
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.9e-100 369.8 205 82.4
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.5e-99 365.5 205 82.0
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 5.6e-89 331.6 273 56.4
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 7.3e-89 331.3 271 57.9
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 9.6e-89 330.9 273 56.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.3e-88 330.5 272 55.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.6e-88 330.1 251 59.4
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 4.8e-88 328.6 275 56.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 6.2e-88 328.2 268 54.9
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 6.2e-88 328.2 251 59.8
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.4e-87 326.2 266 57.1
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 4.0e-87 325.5 265 56.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.2e-86 323.9 251 59.4
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.5e-86 323.6 270 55.6
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.0e-86 323.2 267 55.1
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.6e-86 322.8 270 57.8
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.4e-86 322.4 272 55.9
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 4.4e-86 322.0 267 55.1
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 7.6e-86 321.2 272 54.4
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.3e-85 320.5 267 55.4
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.2e-85 319.7 277 53.4
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 2.9e-85 319.3 270 55.6
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 6.4e-85 318.2 250 57.2
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 6.4e-85 318.2 255 56.5
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.4e-84 317.0 271 54.6
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 2.4e-84 316.2 271 56.5
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 5.4e-84 315.1 251 57.4
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 7.1e-84 314.7 251 58.6
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.2e-83 313.9 273 54.9
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.6e-83 313.5 274 54.4
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.6e-83 313.5 251 55.8
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.1e-83 313.2 275 55.6
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.7e-83 312.8 267 53.2
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 3.5e-83 312.4 272 52.6
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.0e-82 310.8 251 55.8
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 1.0e-82 310.8 254 57.1
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.3e-82 309.7 255 57.3
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 3.9e-82 308.9 251 56.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 5.1e-82 308.5 251 55.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 8.7e-82 307.8 268 54.5
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 3.3e-81 305.8 251 58.2
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 5.6e-81 305.1 266 52.6
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 5.6e-81 305.1 272 52.9
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.6e-81 304.3 276 53.3
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.6e-80 303.5 251 55.8
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 8.1e-80 301.2 309 48.2
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 8.1e-80 301.2 309 48.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.1e-80 301.2 261 53.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.1e-79 300.8 273 52.4
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.8e-79 300.1 270 50.7
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.5e-78 297.0 272 54.0
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.8e-78 295.0 279 50.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 9.9e-78 294.3 308 48.7
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.3e-77 293.9 266 53.4
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.3e-77 293.9 278 50.7
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 8.4e-77 291.2 228 57.9
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.1e-76 290.8 318 44.7
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.4e-76 290.4 249 53.4
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.2e-76 288.9 245 54.7
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 9.3e-76 287.7 265 50.2
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 4.6e-75 285.4 299 48.2
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.8e-74 283.5 219 59.8
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 5.1e-74 282.0 333 43.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 6.7e-74 281.6 272 48.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 8.7e-74 281.2 251 51.4
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.3e-73 278.9 300 46.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.8e-72 276.2 236 53.0
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 6.2e-72 275.0 212 57.5
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.6e-70 269.6 201 61.2
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.4e-70 269.2 200 61.5
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.0e-69 267.7 260 50.8
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.7e-69 266.9 254 51.6
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 6.5e-69 265.0 204 58.8
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.9e-68 263.5 208 58.2
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.2e-68 262.7 253 47.0
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 9.3e-68 261.2 220 54.1
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 3.5e-67 259.2 239 53.1
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.3e-66 257.3 200 57.5
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.3e-66 257.3 200 57.5
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.5e-65 253.1 208 54.3
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 4.3e-65 252.3 200 57.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.6e-64 250.4 270 47.0
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 4.8e-64 248.8 191 58.1
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 4.8e-64 248.8 269 45.7
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.1e-63 246.1 258 48.8
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.0e-58 231.1 206 51.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.0e-58 231.1 330 39.4
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 3.1e-55 219.5 200 54.0
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.4e-54 216.1 290 39.3
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 5.9e-54 215.3 193 51.3
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.0e-50 204.5 252 40.9
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.8e-48 196.4 262 39.7
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 4.8e-48 195.7 183 49.2
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 6.3e-48 195.3 351 32.5
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.4e-47 193.4 226 44.7
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 5.9e-46 188.7 187 51.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 5.5e-36 155.6 178 41.6
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 7.2e-36 155.2 175 46.3
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 5.2e-34 149.1 182 40.7
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 9.7e-33 144.8 110 54.5
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.0e-26 124.8 105 55.2
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 4.5e-22 109.4 148 39.2
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.2e-19 101.3 92 52.2
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.4e-18 97.8 157 36.9
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 2.7e-14 83.6 80 48.8
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 5.9e-14 82.4 242 26.4
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 2.6e-09 67.0 53 54.7
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 8.3e-08 62.0 79 41.8


User provided reference genes

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