Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 1.3e-31 139.0 65 100.0
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 1.3e-31 139.0 65 100.0
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 9.3e-19 96.3 50 90.0
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 9.3e-19 96.3 50 90.0
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 9.3e-19 96.3 50 90.0
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 9.3e-19 96.3 50 90.0
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 9.3e-19 96.3 50 90.0
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 3.5e-18 94.4 49 89.8
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 4.6e-18 94.0 49 87.8
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 4.6e-18 94.0 49 87.8
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 4.6e-18 94.0 49 87.8
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 1.0e-17 92.8 49 87.8
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 1.8e-17 92.0 49 85.7
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 1.1e-16 89.4 49 83.7
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 1.5e-16 89.0 49 81.6
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 4.3e-16 87.4 49 81.6
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 7.4e-16 86.7 49 79.6
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 9.6e-16 86.3 49 79.6
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 9.6e-16 86.3 49 79.6
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 9.6e-16 86.3 49 79.6
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 1.6e-15 85.5 49 77.6
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 1.6e-15 85.5 49 77.6
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 1.6e-15 85.5 49 77.6
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 1.6e-15 85.5 50 76.0
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.1e-15 85.1 49 77.6
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 2.8e-15 84.7 50 78.0
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 3.7e-15 84.3 49 77.6
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 4.8e-15 84.0 50 76.0
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 6.3e-15 83.6 49 75.5
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 6.3e-15 83.6 49 75.5
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 8.2e-15 83.2 50 74.0
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 8.2e-15 83.2 50 78.0
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 8.2e-15 83.2 49 75.5
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 1.1e-14 82.8 50 74.0
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 1.1e-14 82.8 49 75.5
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 1.1e-14 82.8 49 77.6
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.4e-14 82.4 51 74.5
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.4e-14 82.4 51 74.5
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.4e-14 82.4 49 75.5
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 1.8e-14 82.0 49 73.5
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 1.8e-14 82.0 49 75.5
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 2.4e-14 81.6 49 73.5
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 2.4e-14 81.6 49 75.5
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 2.4e-14 81.6 49 75.5
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 3.1e-14 81.3 49 75.5
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 3.1e-14 81.3 49 75.5
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 4.1e-14 80.9 49 73.5
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 4.1e-14 80.9 49 75.5
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 4.1e-14 80.9 49 71.4
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 5.3e-14 80.5 51 70.6
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 75.5
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 5.3e-14 80.5 51 70.6
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 75.5
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 75.5
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 5.3e-14 80.5 49 73.5
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 6.9e-14 80.1 49 71.4
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 9.0e-14 79.7 49 75.5
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 9.0e-14 79.7 49 75.5
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 71.4
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 71.4
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 71.4
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 73.5
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 71.4
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 1.2e-13 79.3 49 71.4
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 1.5e-13 79.0 49 73.5
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 1.5e-13 79.0 49 73.5
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 1.5e-13 79.0 43 79.1
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 1.5e-13 79.0 49 71.4
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 2.6e-13 78.2 41 78.0
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 3.4e-13 77.8 49 71.4
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 3.4e-13 77.8 49 69.4
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 3.4e-13 77.8 49 69.4
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 3.4e-13 77.8 49 71.4
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 3.4e-13 77.8 50 70.0
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 3.4e-13 77.8 49 71.4
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 4.5e-13 77.4 49 67.3
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 4.5e-13 77.4 49 71.4
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 4.5e-13 77.4 49 69.4
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 4.5e-13 77.4 49 71.4
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 5.9e-13 77.0 49 69.4
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 5.9e-13 77.0 49 67.3
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.6e-13 76.6 49 69.4
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 7.6e-13 76.6 49 69.4
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 7.6e-13 76.6 49 69.4
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 7.6e-13 76.6 49 71.4
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 1.0e-12 76.3 49 69.4
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 1.3e-12 75.9 49 71.4
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 1.3e-12 75.9 49 69.4
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 1.7e-12 75.5 49 69.4
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 1.7e-12 75.5 49 67.3
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-12 75.5 49 67.3
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-12 75.5 49 67.3
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.7e-12 75.5 49 67.3
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 1.7e-12 75.5 49 69.4
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 2.9e-12 74.7 49 69.4
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 2.9e-12 74.7 49 67.3
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 2.9e-12 74.7 49 71.4
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 2.9e-12 74.7 49 65.3
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 3.8e-12 74.3 49 69.4
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 3.8e-12 74.3 49 67.3
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 3.8e-12 74.3 49 65.3
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 3.8e-12 74.3 50 66.0
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 5.0e-12 73.9 49 65.3
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 5.0e-12 73.9 49 61.2
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 5.0e-12 73.9 50 66.0
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 6.5e-12 73.6 49 67.3
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 6.5e-12 73.6 49 65.3
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 8.4e-12 73.2 49 67.3
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.1e-11 72.8 49 65.3
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 1.1e-11 72.8 50 64.0
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 1.9e-11 72.0 49 67.3
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 4.2e-11 70.9 49 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 5.5e-11 70.5 50 60.0
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 5.5e-11 70.5 33 90.9
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-10 68.9 55 60.0
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-10 68.9 55 60.0
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-10 68.9 55 60.0
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 3.5e-10 67.8 50 58.0
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.1e-10 67.0 43 67.4
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.1e-10 67.0 43 67.4
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 1.8e-09 65.5 44 61.4
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 3.9e-09 64.3 51 51.0
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 6.7e-09 63.5 50 54.0
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 1.9e-08 62.0 43 65.1
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-08 62.0 43 65.1
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.9e-08 62.0 43 65.1
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 2.5e-08 61.6 43 60.5
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 3.3e-08 61.2 43 60.5
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 5.7e-08 60.5 28 92.9
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.7e-08 60.5 49 59.2
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.7e-08 60.5 49 59.2
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 7.4e-08 60.1 30 80.0
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 2.2e-07 58.5 28 89.3
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 2.2e-07 58.5 46 54.3
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.8e-07 58.2 32 75.0
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 3.7e-07 57.8 30 80.0
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 3.7e-07 57.8 32 75.0
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 4.8e-07 57.4 28 85.7
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.1e-06 56.2 49 57.1
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 1.8e-06 55.5 30 76.7
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-06 55.5 35 65.7
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 3.1e-06 54.7 30 73.3
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 4.1e-06 54.3 31 74.2
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 5.3e-06 53.9 30 73.3
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 6.9e-06 53.5 49 53.1


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