Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p05340 Brassica napus HOM05D008066 ORTHO05D012339 6.5e-89 330.9 187 100.0
A03p56430 Brassica napus HOM05D008066 ORTHO05D012339 7.4e-85 317.4 187 96.3
A10p00910 Brassica napus HOM05D008066 ORTHO05D012339 7.4e-85 317.4 187 95.7
A08p16840 Brassica napus HOM05D008066 ORTHO05D012339 3.8e-81 305.1 187 92.5
BraA08t34083Z Brassica rapa HOM05D008066 ORTHO05D012339 3.8e-81 305.1 187 92.5
BolC3t20154H Brassica oleracea HOM05D008066 ORTHO05D012339 8.5e-81 303.9 187 92.0
A03p51820 Brassica napus HOM05D008066 ORTHO05D012339 1.9e-80 302.8 187 90.9
BraA07t28695Z Brassica rapa HOM05D008066 ORTHO05D012339 4.2e-80 301.6 187 88.2
BraA01t03455Z Brassica rapa HOM05D008066 ORTHO05D012339 5.5e-80 301.2 187 88.2
BraA03t14273Z Brassica rapa HOM05D008066 ORTHO05D012339 5.5e-80 301.2 187 90.4
BraA09t36327Z Brassica rapa HOM05D008066 ORTHO05D012339 1.2e-79 300.1 187 81.3
A09p28660 Brassica napus HOM05D008066 ORTHO05D012339 1.6e-79 299.7 185 84.3
BraA09t38427Z Brassica rapa HOM05D008066 ORTHO05D012339 1.6e-79 299.7 185 84.3
A02p19150 Brassica napus HOM05D008066 ORTHO05D012339 1.4e-78 296.6 181 82.3
C04p72410 Brassica napus HOM05D008066 ORTHO05D012339 2.3e-78 295.8 201 86.1
A08p15960 Brassica napus HOM05D008066 ORTHO05D012339 2.0e-77 292.7 180 92.8
BraA07t28451Z Brassica rapa HOM05D008066 ORTHO05D012339 2.0e-77 292.7 180 90.6
A07p06580 Brassica napus HOM05D008066 ORTHO05D012339 7.4e-77 290.8 180 91.7
A09p36570 Brassica napus HOM05D008066 ORTHO05D012339 4.8e-76 288.1 201 82.6
BraA02t07446Z Brassica rapa HOM05D008066 ORTHO05D012339 1.1e-75 287.0 187 90.4
C02p34510 Brassica napus HOM05D008066 ORTHO05D012339 1.4e-75 286.6 179 86.0
BraA01t01282Z Brassica rapa HOM05D008066 ORTHO05D012339 3.1e-75 285.4 179 83.2
C04p64210 Brassica napus HOM05D008066 ORTHO05D099935 3.4e-74 282.0 187 88.8
A03p05720 Brassica napus HOM05D008066 ORTHO05D100580 5.9e-74 281.2 201 78.1
BraA07t28978Z Brassica rapa HOM05D008066 ORTHO05D012339 1.3e-73 280.0 179 91.1
BraA07t29280Z Brassica rapa HOM05D008066 ORTHO05D108579 1.5e-69 266.5 173 84.4
BraA07t29631Z Brassica rapa HOM05D008066 ORTHO05D108036 5.7e-69 264.6 180 86.7
BraA03t11724Z Brassica rapa HOM05D008066 ORTHO05D108170 1.3e-68 263.5 181 87.3
BraA03t15382Z Brassica rapa HOM05D008066 ORTHO05D108629 9.1e-67 257.3 162 94.4
BraA04t18123Z Brassica rapa HOM05D008066 ORTHO05D107484 1.7e-65 253.1 160 82.5
BraA09t37123Z Brassica rapa HOM05D008066 ORTHO05D107789 1.1e-64 250.4 194 80.4
BraA04t16241Z Brassica rapa HOM05D008066 ORTHO05D108625 2.6e-61 239.2 160 89.4
BraA06t25939Z Brassica rapa HOM05D008066 ORTHO05D108092 2.2e-60 236.1 156 87.2
BraA02t07637Z Brassica rapa HOM05D008066 ORTHO05D107325 2.0e-58 229.6 152 78.9
BcaC02g12099 Brassica carinata HOM05D000070 ORTHO05D003301 1.2e-55 220.3 151 77.5
C01p07240 Brassica napus HOM05D008066 ORTHO05D015523 1.1e-43 180.6 118 94.9
BolC4t28727H Brassica oleracea HOM05D008066 ORTHO05D015523 1.6e-42 176.8 118 93.2
A07p13250 Brassica napus HOM05D008066 ORTHO05D015523 1.3e-41 173.7 118 89.8
BraA06t25156Z Brassica rapa HOM05D008066 ORTHO05D015523 2.9e-41 172.6 118 84.7
BolC5t32187H Brassica oleracea HOM05D008066 ORTHO05D015523 3.8e-41 172.2 118 92.4
BraA07t29396Z Brassica rapa HOM05D008066 ORTHO05D041123 3.3e-40 169.1 87 95.4
C04p13230 Brassica napus HOM05D008066 ORTHO05D015523 9.5e-40 167.5 118 87.3
BolC4t22403H Brassica oleracea HOM05D008066 ORTHO05D015523 1.6e-39 166.8 118 74.6
A05p06220 Brassica napus HOM05D008066 ORTHO05D015523 2.1e-39 166.4 118 83.9
A01p28330 Brassica napus HOM05D008066 ORTHO05D015523 4.7e-39 165.2 118 75.4
A04p05400 Brassica napus HOM05D008066 ORTHO05D103066 8.0e-39 164.5 118 86.4
A07p16720 Brassica napus HOM05D008066 ORTHO05D041123 8.0e-39 164.5 88 94.3
BraA09t38916Z Brassica rapa HOM05D008066 ORTHO05D015523 1.8e-38 163.3 87 92.0
A04p18940 Brassica napus HOM05D008066 ORTHO05D103670 3.4e-37 159.1 118 89.0
C05p41550 Brassica napus HOM05D008066 ORTHO05D101135 1.1e-32 144.1 111 85.6
A01p12200 Brassica napus HOM05D008066 ORTHO05D014534 5.6e-32 141.7 70 97.1
BolC5t32892H Brassica oleracea HOM05D008066 ORTHO05D014534 5.6e-32 141.7 70 95.7
A05p28710 Brassica napus HOM05D008066 ORTHO05D098841 9.5e-32 141.0 107 90.7
BolC9t56263H Brassica oleracea HOM05D008066 ORTHO05D014534 2.1e-31 139.8 70 95.7
A05p25700 Brassica napus HOM05D008066 ORTHO05D014534 2.8e-31 139.4 70 95.7
A06p18910 Brassica napus HOM05D008066 ORTHO05D015523 1.4e-30 137.1 100 86.0
A03p66250 Brassica napus HOM05D008066 ORTHO05D098250 5.2e-30 135.2 111 82.9
A06p27550 Brassica napus HOM05D008066 ORTHO05D015523 5.2e-30 135.2 111 78.4
A07p11930 Brassica napus HOM05D008066 ORTHO05D014534 1.2e-29 134.0 69 92.8
A09p29100 Brassica napus HOM05D008066 ORTHO05D041416 1.2e-29 134.0 68 95.6
A06p37410 Brassica napus HOM05D008066 ORTHO05D014534 2.0e-29 133.3 67 94.0
A04p18930 Brassica napus HOM05D008066 ORTHO05D014534 1.3e-28 130.6 77 85.7
BraA09t37145Z Brassica rapa HOM05D008066 ORTHO05D041416 1.1e-27 127.5 65 95.4
BraA03t14714Z Brassica rapa HOM05D008066 ORTHO05D014534 2.4e-27 126.3 63 95.2
BraA09t39028Z Brassica rapa HOM05D008066 ORTHO05D014534 9.5e-24 114.4 67 82.1
A01p15790 Brassica napus HOM05D008066 ORTHO05D014534 1.1e-22 110.9 56 96.4
A07p15410 Brassica napus HOM05D008066 ORTHO05D014534 4.0e-22 109.0 56 94.6
BolC1t00715H Brassica oleracea HOM05D008066 ORTHO05D014534 4.1e-19 99.0 46 97.8
BraA02t08258Z Brassica rapa HOM05D008066 ORTHO05D014534 5.6e-16 88.6 41 97.6
Thhalv10020031m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 1.8e-14 83.6 55 76.4
Sp3g15620 Schrenkiella parvula HOM05D000023 ORTHO05D000014 1.8e-14 83.6 55 76.4
AT3G17450 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 5.8e-13 78.6 59 67.8
AL3G30530 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 7.6e-13 78.2 55 70.9
CARHR092770 Cardamine hirsuta HOM05D000023 ORTHO05D000014 1.7e-12 77.0 55 70.9
Aa31LG8G4400 Aethionema arabicum HOM05D000023 ORTHO05D000014 2.4e-11 73.2 63 61.9
A02p28000 Brassica napus HOM05D011537 ORTHO05D013034 4.1e-11 72.4 37 86.5
A01p36900 Brassica napus HOM05D000023 ORTHO05D000014 5.4e-11 72.0 55 70.9
C01p46790 Brassica napus HOM05D000023 ORTHO05D000014 5.4e-11 72.0 55 70.9
BolC1t04652H Brassica oleracea HOM05D000023 ORTHO05D000014 5.4e-11 72.0 55 70.9
BraA01t03749Z Brassica rapa HOM05D000023 ORTHO05D000014 5.4e-11 72.0 55 70.9
BraA01t02753Z Brassica rapa HOM05D008066 ORTHO05D108486 4.6e-10 68.9 43 81.4
BraA05t19586Z Brassica rapa HOM05D008066 ORTHO05D014534 1.0e-09 67.8 37 89.2
MD13G1139200 Malus domestica HOM05D000023 ORTHO05D000014 1.8e-06 57.0 71 46.5
Prupe.1G105600 Prunus persica HOM05D000023 ORTHO05D000014 3.1e-06 56.2 71 46.5
Migut.G00001 Erythranthe guttata HOM05D000023 ORTHO05D000014 5.2e-06 55.5 63 44.4
Migut.O00402 Erythranthe guttata HOM05D000023 ORTHO05D000014 5.2e-06 55.5 63 44.4
MD16G1136600 Malus domestica HOM05D000023 ORTHO05D000014 5.2e-06 55.5 71 45.1
THA.LOC104802620 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 5.2e-06 55.5 55 50.9
Hma1.2p1_0013F.1_g007920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.8e-06 55.1 59 47.5


User provided reference genes

Program Settings