Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 2.4e-49 198.4 89 100.0
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 4.5e-48 194.1 89 97.8
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 4.5e-48 194.1 89 97.8
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-45 186.0 89 93.3
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.0e-43 178.7 88 87.5
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 3.3e-43 177.9 88 87.5
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-43 177.2 89 89.9
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 5.7e-43 177.2 89 89.9
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 5.7e-43 177.2 89 89.9
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.5e-40 167.9 88 83.0
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.7e-39 165.6 87 83.9
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.8e-39 164.5 88 81.8
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-38 162.9 83 84.3
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 3.2e-38 161.4 86 79.1
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.1e-35 152.9 87 73.6
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.0e-32 142.1 93 63.4
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 3.5e-32 141.4 90 68.9
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-31 139.4 88 68.2
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 1.3e-31 139.4 88 68.2
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 1.7e-31 139.0 88 67.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-30 136.3 88 67.0
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-30 136.0 86 68.6
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.5e-30 136.0 86 67.4
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 5.5e-30 134.0 91 65.9
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.2e-29 132.9 91 65.9
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-29 132.9 89 66.3
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 1.6e-29 132.5 89 62.9
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-29 132.5 87 65.5
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.7e-29 131.7 91 65.9
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 2.7e-29 131.7 89 65.2
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 4.7e-29 131.0 90 63.3
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 4.7e-29 131.0 90 63.3
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 4.7e-29 131.0 90 63.3
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 6.1e-29 130.6 84 66.7
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 8.0e-29 130.2 90 64.4
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 8.0e-29 130.2 90 65.6
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.0e-28 127.9 90 61.1
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 4.0e-28 127.9 90 64.4
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 4.0e-28 127.9 90 64.4
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 5.2e-28 127.5 94 62.8
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.2e-28 127.5 90 61.1
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 5.2e-28 127.5 67 73.1
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 5.2e-28 127.5 92 63.0
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 5.2e-28 127.5 92 63.0
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 5.2e-28 127.5 92 63.0
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.2e-28 127.5 87 64.4
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 6.7e-28 127.1 87 60.9
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 6.7e-28 127.1 88 63.6
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-27 126.3 90 63.3
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-27 126.3 87 67.8
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-27 126.3 87 67.8
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-27 125.9 66 72.7
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-27 125.6 90 62.2
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 4.4e-27 124.4 66 71.2
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 5.7e-27 124.0 80 68.8
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.7e-27 124.0 91 60.4
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.2e-26 122.1 87 58.6
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.2e-26 122.1 94 58.5
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 3.7e-26 121.3 89 60.7
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 3.7e-26 121.3 89 60.7
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 4.8e-26 120.9 67 65.7
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-26 120.9 88 59.1
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 6.3e-26 120.6 91 61.5
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.4e-25 119.4 87 63.2
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.8e-25 119.0 95 56.8
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 1.8e-25 119.0 92 63.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 3.1e-25 118.2 87 63.2
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 3.1e-25 118.2 88 54.5
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 5.3e-25 117.5 71 62.0
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.0e-25 117.1 88 61.4
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.7e-23 112.5 87 58.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.1e-22 109.8 88 54.5
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.5e-22 109.4 65 64.6
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-22 109.4 88 50.0
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 9.4e-22 106.7 89 53.9
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.1e-21 105.5 69 68.1
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 2.3e-20 102.1 77 63.6
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 8.8e-20 100.1 87 48.3
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 4.4e-19 97.8 88 53.4
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.7e-18 95.9 87 52.9
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 6.3e-18 94.0 87 51.7
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.1e-17 93.2 87 51.7
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 1.4e-17 92.8 87 52.9
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 1.4e-17 92.8 85 51.8
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-17 92.4 87 47.1
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.8e-17 92.4 88 47.7
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.0e-17 90.5 88 46.6
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 7.0e-17 90.5 88 50.0
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 7.0e-17 90.5 88 51.1
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 7.0e-17 90.5 88 51.1
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 7.0e-17 90.5 88 51.1
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 7.0e-17 90.5 88 44.3
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 9.1e-17 90.1 88 50.0
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 9.1e-17 90.1 88 50.0
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 2.9e-15 85.1 87 50.6
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-14 82.4 91 42.9
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.2e-13 79.7 92 41.3
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 1.0e-12 76.6 86 43.0
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 8.9e-12 73.6 86 41.9
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.2e-11 73.2 93 46.2
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.2e-11 73.2 93 46.2
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 1.5e-11 72.8 94 45.7
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 3.4e-11 71.6 94 44.7
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 2.2e-10 68.9 89 40.4
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 2.8e-10 68.6 64 46.9


User provided reference genes

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